Caloenas nicobarica (Nicobar pigeon): 135992126
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Entry
135992126 CDS
T11056
Symbol
IRX5
Name
(RefSeq) iroquois-class homeodomain protein IRX-5 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135992126 (IRX5)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
135992126 (IRX5)
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
135992126
NCBI-ProteinID:
XP_065497171
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Position
9:6756364..6759273
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AA seq
473 aa
AA seq
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MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTAPSPG
YNSHLQYGTDPAAAAAAAFTSYVGSPYDHTPGMAGSLGYHPYAAPLGSYPYGDPAYRKNA
TRDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWT
PRNRSEDEEEEENIDLEKNDEDEPQKLEEKGDPATPDTGAADPKAVPGCERLQESPGPRE
AEGGLSDSDCKEPAEERLDGPPAPPKAPGSSPLGPCPAGRGPPPAGGEEPQPYRPPSAAA
GPLHAADLHPLLPAATGASVIHSPQQAALAKPKLWSLAEIATSADKAKEAGGEAAPPGPA
VLGGGGPSRSPPRPRSPAAQCPFPNGAVLPRPLYYTAPFYPGYTNYGSFGALHGHPAGGP
AAAAPGAHFNGLNQTVLSRAENLAKDTKMIRSQSQVDLCKDSPYELKKGMSNI
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatcctcagggttacttgtaccagccttcagcgtccttggctctctactcgtgc
ccggcgtacagcaccagcgtgatctccggacccaggaccgatgaacttgggagatcttct
tcgggctccgctttttccccttatgccggatctaccgcctttaccgccccttccccgggt
tacaactcccacctccagtacggcaccgacccggccgccgccgccgccgccgccttcact
tcctacgtgggctcgccctacgaccacacgccgggcatggccggctccctggggtaccac
ccgtacgcggcgccgctcggctcctacccctacggggatcccgcgtaccgcaagaacgcg
acgcgggacgccacggccaccctcaaggcctggctcaacgagcaccggaaaaacccctac
cccaccaagggcgagaagatcatgctggccatcatcaccaaaatgaccctcacccaggtc
tccacctggttcgccaacgcgcgacggcggctcaaaaaggagaataaaatgacctggacg
ccgcggaaccgcagcgaggacgaggaggaagaggagaacatcgacctggagaaaaacgac
gaggacgagccccagaaactggaggagaagggggaccccgcgacgccggacaccggagcc
gcggatcccaaggcagtgccaggctgcgagcgcctccaggagtcccccggcccccgggag
gccgagggcggcctcagcgactcggattgcaaagagccggcggaggagcggctcgacggg
ccgcccgctccccccaaggcgcccggctcttccccgctgggcccgtgcccggcgggccgc
gggccgccgcctgcgggcggcgaggagccccagccgtaccgcccgccctccgccgccgcc
gggccgctgcacgccgccgacctgcacccgctgctgcccgccgccaccggcgcctccgtc
atccactcgccgcagcaggcggccctcgccaagcccaagctctggtccctggccgagatc
gccacctcggcggacaaggcgaaggaggcgggcggcgaggcggcgccccccggccccgcc
gtgctgggcggcggcggcccgtcgcgttcgccgccgcggccgcgctcgccggcagcgcag
tgccccttccccaacggggcggtcctgccgcggccgctctactacacggcgcccttctac
cccggttacacgaactacggctcctttggggccctgcacgggcaccccgccggcggcccc
gccgccgccgcccccggggcccacttcaatggattaaaccagactgtcctcagcagagcc
gagaacctggctaaagacactaaaatgatcaggagccagtcccaagtagacctttgcaaa
gactcaccctacgaactgaagaaaggtatgtccaacatttaa
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