Caloenas nicobarica (Nicobar pigeon): 135992256
Help
Entry
135992256 CDS
T11056
Symbol
FHOD1
Name
(RefSeq) FH1/FH2 domain-containing protein 1 isoform X1
KO
K23938
FH1/FH2 domain-containing protein 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135992256 (FHOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cnic04812
]
135992256 (FHOD1)
Cytoskeleton proteins [BR:
cnic04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
135992256 (FHOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
FH3_FHOD1-3
Formin_GBD_N
RRG8
Drf_GBD
Stonustoxin_helical
Motif
Other DBs
NCBI-GeneID:
135992256
NCBI-ProteinID:
XP_065497369
LinkDB
All DBs
Position
9:17368057..17383681
Genome browser
AA seq
1279 aa
AA seq
DB search
MAEAVVPCRVQYLEDADPFGCGSFPEPRRAPVYAVEEALALGVQLPALHRLLGAPLPLED
CTLQVSPSGHYLDLDLSLLEQKDDLEGFYEEVRKGRRPTLILRTQLSVRVHAIIEKLYNS
QGPELRRSLFSLKQLFQEDKDLVPEFVNLDGLTCLIKVGAEADQNYQNYILRALSQIMLF
VDGMQGVINHNETIQWLYTLSGSPFRLVVKMALKLLLVFVEYTEPNALLLIRAVNAVDQA
RGTCPWSNLMAILEQRHGADTELLVFTMTLINKTLAALPDQDTFYDVTDCLEQQGMERVV
QQYLDSKGTDLDLKQQFTLYESALKLEDDVEEPPSGGRKERRRTDEGRRGWRSQGGCPEP
SPDAQPLQGSPGTPKEPPTEDTPAVPTQSSLAEPCPGSIYNSASTMRLSLASPQAEKEQP
PGPGERSVYKLRQTAPVWREDAPSLHGDKPILRKFEARFLENLAAAQKEKISSMAKGRLD
VLSDAALEHPAAFLWDRDSSTPEPGTETPNIRSRLSRPDTTDTCSTISSDTKFMLDMLYA
KGSSEPGREKVFPKGPSSPPVQGEVDTDMEGGGSREQEGAWLCGRAPDGPVASAHAKLTR
AMSSVDAETHTQKLENTGMMPIKKDAELTWEHLEASPVQLKIKDLDFTDLGEEEDYDILD
TGPMANGSFLPPSIEATSAGTLMAPPPPPAIPGCPPPPPPPPMIPGCPPPPPPPPAFPGC
PPPPPPAVPGCPPPPGLPGLAATDGPSQAKKKRTVKLFWKELKQLDGTVGPGRFGQATLW
ASLQSVEVNAAKLEHLFESRSKEAPTSKKAIDGKKVVVVLDPKRSNAINIGLTVLPPVHI
IKTAVLNFDEFAVNKEGIEKILTMVPTEEEKQKIQEAQLANPDVPLGSAEQFLLALSSIS
DLTPRLQLWAFKLDYESLEQEIAEPLFDLKVGMEQLARNHTFKCILATLLAMGNFLNGSQ
SRGFELGYLEKVSEVKDTVHRQSLLYHLCQTVVEKFPETTDLYSEIASITRSAKVDFDEL
ANSLMQLERRCRTSWDNLKVIAKHETKPVLKSKLTDFLKDSTQRIVVLKVVHRRVLNRFH
SFLLYLGYPASTVRDVKVTTICKLLREFALEYRTCRERVLQQQKKRAAHRERNKTRGRLI
TETEKFSGIAEAALPPAVVSSSPEEQMETGHESMKNLLTSPTDAPARRSRASRGTGHTTP
TQGSPAQEDVPSSPDDASDEIMDRLVKSVTHNANPRPCANKERRRSRGNRKSLRRTLKSG
LSDDLVQALGLGRAPGMEV
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggtggttccgtgccgggtccagtacctggaggacgcggatcccttcggc
tgcggcagcttcccggagccgcggcgagctccggtttacgccgtggaggaggcgctggcc
ctgggcgtgcagctgcctgcgctgcaccgcctgctcggggccccgctgccgctggaggac
tgcacgctgcaggtctcgccctccggacactacctggaccttgacttgtccctgttggag
cagaaggatgatctggagggtttctatgaggaggtcaggaaggggagacggccaactctg
atcctgcgcacgcagctctccgtccgagtccacgccatcattgagaagctgtacaactca
caggggccagagctgcgacgctccctcttttccctcaagcagctctttcaggaggacaag
gacctggtgccagaattcgtgaacctggatgggttgacatgtctgatcaaagtgggggca
gaggccgaccagaactaccagaattacatcctccgggccctgagccagatcatgctcttc
gtggacgggatgcagggtgtcatcaaccacaatgagaccatccagtggctgtacacgctg
tcgggaagcccgtttcgcctggtggtgaagatggcactgaagctgctgctggtgttcgtg
gagtacacggagcccaacgccctgcttctcatccgcgccgtcaacgccgtggaccaggca
agaggcacttgcccatggtccaacctgatggccatcctggagcagcgccacggggctgac
acggagctgctggtgttcaccatgacgctgatcaacaagacgctggcagccctcccggac
caggacaccttctacgatgtgacggactgcctggagcagcagggcatggagcgggtggtg
cagcagtacctggacagcaagggcaccgacctcgacttgaagcagcagttcacactctat
gaaagcgctctcaagctggaggatgatgtggaagagccaccctcaggggggcgcaaggag
cggaggaggacggacgagggccggcgtgggtggcgatcacagggtggctgcccggagccc
agccccgatgcccagccactccaggggtcccctggcaccccgaaggagcctcccactgag
gacaccccggctgtccccacacagagcagcctggcagagccctgtcctggcagcatctac
aacagcgcatccacgatgcggctgtccctggcctccccccaggccgagaaggagcagccc
ccgggcccgggcgagcgcagcgtctacaagctgcgccaaacggcccctgtctggcgggag
gatgccccctccttgcatggggacaagcctattttgaggaagtttgaagctcgcttcttg
gagaacctggccgcagcccagaaggagaagatctcttccatggccaaaggacggctcgat
gtcctcagcgatgctgcgctggagcatcctgctgctttcttgtgggacagggacagcagc
acccctgagccaggcacggagacacccaatataaggtctcgcctgtctcggccagacacc
accgacacctgcagcaccatctcctctgacaccaagttcatgctggacatgctctacgcc
aagggctcctcagagccggggagggagaaggtcttccccaagggaccatcgtcccccccg
gtccagggtgaggtggacacggacatggaaggaggtggcagccgggagcaggagggcgcc
tggctctgtggcagggctccggacgggccagtggccagtgcccatgccaagctgacgcgt
gccatgtccagcgtagatgctgagacccacacacagaagctggaaaacactgggatgatg
cccatcaagaaggatgcagagctgacatgggagcacctggaggccagccccgtgcagctg
aagatcaaggacctggacttcactgatttgggggaagaagaagactacgacatcctggac
acaggccccatggccaatggctctttcctccctcccagcattgaagcaacaagtgctgga
actctcatggctccccctccacctcctgccatccctggttgcccaccacctccacctcca
cctcccatgatccctggctgcccaccacctccaccgccacctcctgcattccctggctgc
ccaccacctccacctcccgcggtccccggctgcccaccccccccagggctgccaggcctt
gcagcaacagatggcccctcccaggccaagaaaaaaaggacagtgaagctcttctggaag
gagctgaagcagctggatggcactgtggggccaggaaggttcggccaggcgacactatgg
gcatccctgcagagcgtcgaggtcaatgctgccaaactggagcatctctttgagtcacgg
tcaaaagaagcgccaacttcgaagaaggccatcgatgggaagaaggtggtggtggtgctg
gaccccaagaggagcaacgccatcaacattggcctcacagtgctgccacctgtgcacatc
atcaagacggctgtgctgaactttgatgagtttgcggtcaataaggaagggattgagaaa
atcttgaccatggtcccaactgaggaggagaagcagaagatccaagaggcccagttggcc
aaccctgatgtgcccttgggctccgcggagcagttcctgcttgccctgtcttccatcagt
gacctcacgcccaggctccagctctgggccttcaagctggactacgagagcctggagcag
gagattgcagagccgctctttgatctgaaggtgggcatggagcagctggccagaaatcac
accttcaagtgcatcctggccacgctgctggccatgggaaacttcttgaatggctcccag
agcagaggctttgagctgggctacctggagaaggtctcagaagtgaaggacacagtgcac
cggcaatccctgctctaccacctctgccagacggtggtggagaagttcccagaaaccacc
gacctctactcagagatcgcctccatcacccgctccgccaaggttgactttgacgagctg
gccaacagcctgatgcagctggagcggaggtgcaggacctcctgggacaacctgaaggtg
atcgccaagcatgagaccaagccagtgctgaagagcaagctgacagacttcctcaaggac
agcacccagcgcattgtcgtcttgaaggtggtgcacaggcgtgtcctcaacaggtttcac
tctttcctgctgtacctggggtacccagcgagcacagtgcgggacgtgaaggtcacaacc
atctgcaagctgctgcgggagttcgctctggagtaccgcacctgccgggagcgtgtcctg
cagcagcagaagaaacgggccgcccatcgcgagcgcaacaagacccggggacggctcatc
accgagactgagaagttctctggcattgctgaggccgctctaccgcccgccgtggtgtcc
agcagccccgaggagcagatggaaacgggacacgagagcatgaagaacctactgacctcc
cccacggatgcccctgcccgccgcagccgggccagccgggggacaggacacaccacccca
acccagggctctccagcccaggaggatgttcccagctccccagacgatgcttcagatgaa
atcatggaccgactggtgaaatcggtgactcacaacgccaacccccggccctgcgccaac
aaggagcgcaggaggtcccgcggcaataggaagtccttgagacggacgctgaagagcggg
ctcagcgatgacctggtgcaggcgctgggcctggggcgggcacccggcatggaggtctga
DBGET
integrated database retrieval system
