Caloenas nicobarica (Nicobar pigeon): 135992320
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Entry
135992320 CDS
T11056
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
135992320 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135992320 (MYO5C)
04131 Membrane trafficking [BR:
cnic04131
]
135992320 (MYO5C)
03029 Mitochondrial biogenesis [BR:
cnic03029
]
135992320 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cnic04812
]
135992320 (MYO5C)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
135992320 (MYO5C)
mRNA cycle factors
P-body specific factors
135992320 (MYO5C)
Membrane trafficking [BR:
cnic04131
]
Others
Actin-binding proteins
Myosins
135992320 (MYO5C)
Mitochondrial biogenesis [BR:
cnic03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
135992320 (MYO5C)
Cytoskeleton proteins [BR:
cnic04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
135992320 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
135992320
NCBI-ProteinID:
XP_065497449
LinkDB
All DBs
Position
10:10923336..10958551
Genome browser
AA seq
1740 aa
AA seq
DB search
MALAELYTQYNRVWIPDNEEVWQSAEITKNYKAGDRFLHVQLEDGTELNYPVDPAALPPL
RNPDILVGENDLTALSYLHEPAVLHNLKVRFVESKLIYTYSGIILVAINPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSGNAQVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDQHYQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAMQPEFKHLKLGSAEEFNYTKMGGSTVIEGVDDR
ANMVETQKTFALLGLKGDFQMDVFKMLAAILHLGNVEITAVGDERSSISREDKHLNIFCE
LLDLNGDKMAQWLCHRKIVTTSETVIKPMTRAQAVNARDALAKKIYSHLFDFIVERINQA
LQFPGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFINKNALFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVHEVLIEILKESKFHLCANFFQDNPVSISPF
SSTINIKSARPVLKPPNKQLRMTVGSKFRSSLSLLMVTLNATTPHYVRCIKPNDEKLPFE
FDSKRVAQQLRACGVLETIRISAQSYPSRWTYIEFFSRYSILMTQQELSLNDKKQICRIV
LQRLIQDCNQYQFGRTKIFFRAGQVAYLEKLRSDKLRQACIMIQKSVRGWLQRKKFLRVK
EAAVIIQQYFRGQRTVRQAITARTLKETWAAIIIQKYCRGYLVRRLCQLIHVAAVTIQAY
TRGFLARKKYRKMLEEHKAVILQKHARAWLARRRFQNIRRFVLNIQLSYRVQQLQKKVEE
QNRENHGLLERLTNLASTHMNDMDTIQKLELELEKLIAQRRTYEEKGEKYKEDSEQKILK
LENQNKELQEQKETLEIKLQEKMEEMKEKMDDLTKQLFNDVQKEENQRMILEKKLQNQKQ
DYEKEIELLKGEIKILKEEKTQLQHQIQQEIVIQDGLKMEVGQLTKQAQKIPELQKEIEL
LQAQKLDVEKQAQSQKRELREKMSGVTKQLLESYDFDDVRSRLSTEDLEHLNEDGELWFA
YEGLKKATRVLESHFQSQKEVYEKEIEGLNFKVEHLSQDINHLQKLFREENDINDGIRLE
VSRLTSENLVIPDLKQQVSELENQKLDLENRLQEQTIKLKGKVPEMSNRLHYELEGNRTQ
KRTNEVQNEVDIEEKERLKVTTQEIEGLSNGLMQDEIQDEVKNKIKQETTRLTVENMDLE
EKLDMKDRIIKKLEDQIKTLTKTIEKAEACVPTLDKEYIGMMEYKKEDEERIIQNLILDL
KPRGVVVNMIPGLPAHILFMCVRYADYLNDVDMLKSFMNVTIDGIKQVVKEHSEDFEMLS
FWLSNTYYFLNCLKQYSGEEEFMKCNTPRQNKNCLKHFDLSEYRQILSDLAIRIYHQFII
VMENNIQPMIVPGMLEYESLQGISGLKPTGFRKRSSSIDDTDTYTMTSILQQLSYFYSTM
CQNGLDSELLKQAVKQLFFLIGAITLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDKNL
QSSNAKETLEPLSQAAWLLQVKKITDDDAKEICEHCTSLSTVQIVKILNSYTPIDDFEKR
VTPSFVRKVQAMLNNREDVPQLMLDTKYLFQVTFPFTPSPYALEMIQVPRSFKLGFLTRI
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggccgagctctacacccagtacaatagggtttggatccctgataatgaagaa
gtttggcagtctgcagaaatcaccaaaaactacaaagccggagaccgttttctccatgtg
caattagaagatggaactgaactgaattaccctgttgatccagctgctttgccaccccta
cgaaatcccgacatacttgttggtgaaaatgatctcactgcacttagttatctccatgaa
ccagctgttctacataatcttaaagttcgtttcgtggagtctaagcttatctacacctat
agtggaataattttggtggcgataaacccctataaacagttgccaatatatggagatgct
attatccatgcatatagcgggcaaaacatgggggacatggatccacatatatttgctgtg
gcagaagaagcgtacaagcaaatggcaagaaataacaaaaatcagtctattatagtcagt
ggagaatcaggagctggaaagactgtgtccgcaagatacgctatgagatactttgccact
gtgagtaagtccagcggcaacgcgcaggtggaggataaagtgctggcatccaacccgatc
accgaggctgttggcaatgcaaaaaccacacgaaatgataatagcagtcgatttggaaag
tacactgaaatcagttttgatcagcattatcaaattattggagctaacatgagaacatac
ctgcttgagaaatccagagttgtctttcagtcagagaatgagagaaactaccatatattt
tatcagttgtgtgcatctgctatgcaacctgaatttaagcatcttaaattgggaagtgca
gaagaatttaactacacaaaaatgggtggcagcacagtaatagaaggagttgatgacaga
gcaaatatggtggagactcagaagacatttgctttactgggtctgaagggggattttcag
atggatgtttttaaaatgctggcagcaattctacacttgggcaatgtggaaataacagct
gttggagatgaaagatcatccatcagtcgggaagataaacatctcaatatattctgtgaa
cttctggatttaaatggtgacaaaatggcacaatggttgtgccaccgaaagattgtcacc
acatcggagactgtcataaagccgatgacgagagctcaggctgttaatgcgagggatgct
ctggccaagaagatctattctcatttatttgactttattgtggaaagaattaaccaagct
ttgcagttccctggcaaacaacatacttttattggtgttttggacatttatggctttgaa
acatttgatgtgaacagttttgaacaattttgcatcaattatgctaatgaaaaactgcag
cagcaatttaacctgcatgtctttaaacttgaacaagaagaatatatgaaggaagatatc
ccatggactttaatagacttctatgacaaccagcctgtcattgaccttattgaagctaaa
atgggaattttagaacttctggatgaagagtgcttgttgcctcatggaacagatgaaaac
tggcttcaaaagctatataataattttatcaataaaaatgcactctttgaaaagccgagg
atgtcaaacacttctttcatcattcaacactttgctgataaggtagaatataaatgtgaa
ggatttctggaaaaaaacagagatacagtacatgaagtattgattgaaatcttgaaagag
agcaagtttcatctctgtgcaaattttttccaagacaatccagtgtccatttcacctttc
agttcaactataaacatcaaatccgccagacctgttctcaagccccctaacaaacagctc
cggatgactgttggcagtaagttccggagttctttgtctttgcttatggtgacactcaat
gcaaccacccctcattatgtacggtgcataaagccaaatgatgagaagctgccttttgag
tttgactcaaaaagagtggctcagcaactgcgagcatgtggtgttttggaaactattcga
attagtgcacagagttacccatccaggtggacttacattgagtttttcagccgttacagc
attcttatgacacagcaggaactctccttaaatgataagaagcagatttgcaggattgtt
ttgcagcgactaatccaggattgtaaccaatatcagtttgggagaacaaaaattttcttc
agagcagggcaggttgcttacctagaaaaactgcgatcagataaactgagacaggcatgc
atcatgatccaaaaaagcgttcgaggctggctgcagcggaagaaattccttcgtgtaaaa
gaagcagctgtgataatacagcagtatttccgggggcagcggaccgtacggcaagctata
actgcaagaactctgaaggaaacatgggccgctataattatccagaaatactgtcggggt
tatctggtccgtagactttgccagctcatccatgtggctgctgtaacaattcaagcttat
acgagaggatttctagcaagaaaaaaatatcgaaagatgctcgaagaacacaaggctgtg
atccttcagaaacatgcccgtgcatggcttgccaggcgcagatttcagaatattcggcgg
tttgtgttgaatatccagctttcatacagagttcagcaactgcagaagaaagtagaagaa
cagaatagagaaaatcatggtttgctggaacgattgaccaatctggcttcaactcatatg
aatgacatggatacaattcagaaacttgaattagagcttgaaaagttaattgctcaaagg
agaacatatgaagagaaaggggaaaaatataaagaggacagtgaacagaaaatcttaaaa
cttgagaatcagaataaagaattacaagaacagaaagagaccttagaaataaagctccaa
gaaaaaatggaggaaatgaaagagaaaatggatgacctcacgaagcagctcttcaatgat
gtacaaaaagaagaaaatcagagaatgatacttgagaaaaaactccaaaatcagaagcag
gactatgaaaaggagattgaattgctcaagggagaaattaagattctgaaagaagaaaaa
actcagctacaacatcaaattcagcaagaaattgtcattcaggatggcttgaaaatggaa
gtaggacaacttacaaaacaagcacagaaaatacctgagttgcaaaaggaaattgaactg
ctgcaggcgcaaaagttggatgtcgaaaagcaagcccagtcacagaagcgagaactgagg
gaaaagatgtcgggagttacaaaacagcttcttgaaagttatgattttgatgatgtaaga
agcagactctctacggaggatttggaacacttaaatgaggatggagaactgtggtttgct
tacgagggcttgaaaaaagctacaagagtgttggaaagtcatttccagtctcagaaagaa
gtatacgaaaaggagattgaaggtttgaactttaaagttgaacatcttagccaagatatt
aatcatctacaaaaattatttcgagaggaaaatgacataaatgatggtattcgacttgaa
gtcagcaggctaacttcagaaaacctggtgatcccagatcttaaacagcaagtttctgaa
cttgaaaatcaaaaactagatcttgaaaaccgtcttcaagagcagactataaagttgaaa
ggtaaggtaccagagatgtctaatcgactgcattatgagctagaagggaataggacacaa
aaacgaacaaatgaggtccagaatgaagtagacatagaagaaaaagagagactgaaagtc
acaacccaagaaattgaggggctgagcaatggtttgatgcaagatgaaatccaggatgaa
gtaaaaaacaagataaagcaagaaacgactcgacttactgtagaaaacatggatcttgaa
gaaaaactggacatgaaagacagaataataaaaaaattggaggaccagatcaaaactctt
accaagactattgaaaaagctgaagcttgtgtgccaactttggacaaagagtacattgga
atgatggagtacaaaaaagaggatgaagaaaggatcattcaaaatctgatcctcgattta
aagccgcgtggagttgtagttaatatgatacctggccttccagctcacatcctattcatg
tgtgtgaggtatgcagattatctgaacgacgttgacatgctgaaatctttcatgaacgta
actattgatggtatcaaacaggttgttaaggaacattcagaagactttgagatgttgtcc
ttttggctttccaatacgtactattttcttaactgtttgaagcagtacagcggggaagag
gaatttatgaagtgtaacactccacgtcagaataagaactgtttgaagcattttgatctc
tcagaatacagacaaattcttagtgacttggccattcgtatctaccaccagttcattatt
gtgatggagaacaacattcagcccatgatcgtgccaggcatgctggaatatgaaagtctt
cagggaatttctggcttgaaacctacagggttccgtaaacgttcttctagtatagacgac
acggatacctacaccatgacctctatcctgcagcagctcagctatttttatagcaccatg
tgccagaacggcttggactctgagctgctgaagcaggcggtgaaacagcttttctttctg
atcggagccatcaccctcaatagcctcttcctccgcaaggacatgtgctcgtgcagaaaa
ggaatgcagataagatgtaatatcagctacttggaagagtggcttaaggacaagaatctc
caaagcagcaatgccaaagaaactttggagcctctgtctcaagcagcctggctccttcag
gtcaaaaagatcacagatgatgatgccaaagaaatatgtgaacactgcacatctctttct
accgtgcagatagttaagatcctcaactcatacactccaatagatgattttgagaaaaga
gtgactccatcatttgttcgtaaagtccaggctatgctgaacaatcgtgaggatgttcca
cagttgatgctcgataccaagtatctctttcaagtgacgtttcctttcaccccctctcca
tatgccttggaaatgatacaagtccccaggagcttcaaacttggcttcctcacaaggatt
taa
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