Caloenas nicobarica (Nicobar pigeon): 135992336
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Entry
135992336 CDS
T11056
Symbol
MYO5A
Name
(RefSeq) unconventional myosin-Va
KO
K10357
myosin V
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
135992336 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135992336 (MYO5A)
04131 Membrane trafficking [BR:
cnic04131
]
135992336 (MYO5A)
03029 Mitochondrial biogenesis [BR:
cnic03029
]
135992336 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cnic04812
]
135992336 (MYO5A)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
135992336 (MYO5A)
mRNA cycle factors
P-body specific factors
135992336 (MYO5A)
Membrane trafficking [BR:
cnic04131
]
Others
Actin-binding proteins
Myosins
135992336 (MYO5A)
Mitochondrial biogenesis [BR:
cnic03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
135992336 (MYO5A)
Cytoskeleton proteins [BR:
cnic04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
135992336 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
Myosin_N
AAA_22
MC7
Talin_IBS2B
NPHP3_N
HetR_C
Motif
Other DBs
NCBI-GeneID:
135992336
NCBI-ProteinID:
XP_065497480
LinkDB
All DBs
Position
10:10824387..10922488
Genome browser
AA seq
1877 aa
AA seq
DB search
MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLDPKTKELP
PLRNPDILVGENDLTALSYLHEPAVLHNLKIRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFKTLRLGNANYFHYTKQGGSPVIDGVD
DAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFVSRDSDSCTVPPKHEPLTIF
CDLMGVEYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVN
KALHATVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCTLFEK
PRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKFKLLPELFQDEEKVLS
PTSATPSGRVPLSRTAVKPAKARPGQASKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQRDVL
SDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKMIRGW
LMRKKYVRMRKAAITIQRYVRGYQARCYAKFLRRTRAAITIQKFQRMYVVRKRYQCMRDA
TIALQALLRGYMARNKYQMMLREHKSIIIQKHVRGWLARVHYSRTLKAIVYLQCCYRRMM
AKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKSLLEKMSNLEITYSTE
TEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLQKELHQTQSEKKTIEEWADKYKHET
EQLVSELKEQNTLLKTEKEELNRRIHDQAREITETMEKKLVEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKDEMNLMVSIPKPGHKRTDSTHSSNESEYTFSSEITEAEDLPVRM
EEPSEKKAPLDMSLFLKLQKRVTELEQEKQSLQDELDRKEEQALRAKAKEEERPPIRGAE
LEYESLKRQELESENKKLKNELNELQKALTETRSPEVTAPGAPAYRVLLDQLTSVSEELE
VRKEEVLILRSQLVSQKEAIQPKNTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNRQSP
QDYHMLNEDGELWLVYEGLKQANRLLESQLQSQKKSHENELELLRGEIQGLKEENNRQQQ
LLAQNLQLPPEARIEASLQHEITRLTNENLFYEELYADDPKKYQSYRISLYKRMLDLMEQ
LEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRKEKDFQGMLE
YKKEDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVRSLLTSTIN
GIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTPRQNEHCLTNFDLAEY
RQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRTSSIADEGT
YTLDSIIRQLNSFHSVMCQHGMDPELIKQVVKQMFYIIGAITLNNLLLRKDMCSWSKGMQ
IRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDEDAEAICSMCNALTTAQ
IVKVLNLYTPVNEFEERVLVSFIRTIQMRLRDRKDSPQLLMDAKHIFPVTFPFNPSSLAL
ETIQIPASLGLGFISRV
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccgagctctacaccaagtatgccagggtttggatccctgatccagaggag
gtctggaagtcagcagaacttctcaaagattataaacctggagataaagttctgcagctt
cgacttgaagagggcaaggacctagaatattgcctagatccgaagacgaaggaactcccg
cccttgcgaaaccctgacatactcgttggcgaaaatgacctcacggcactcagttatctc
catgaacctgccgttctacacaacctcaaaattcgctttatagactctaaactgatctat
acctattgtggtattgtcttagtggccataaatccttatgaacaactgcctatctatggc
gaagatatcatcaatgcgtacagtggccaaaatatgggggatatggatccacatatcttt
gcagtggctgaagaagcctataagcagatggccagagatgagcgaaatcagtcgatcatt
gtcagtggggaatctggagccggaaagaccgtctctgctaaatatgccatgaggtacttt
gccaccgtcagtggatctgccagtgaagccaatgttgaggagaaggttttggcctccaac
cccatcatggagtctattggaaatgccaaaactacaaggaatgataacagcagtcgcttt
gggaagtacattgaaatcggttttgataagagataccgaatcattggtgctaacatgaga
acgtacctcttggaaaaatcaagagtcgtgtttcaggcagaagaggagagaaattaccac
atcttttaccagctttgtgcctctgcagcattacctgagtttaaaactctacgattaggt
aatgcaaattactttcactacacgaagcaaggtgggagccctgtgattgatggtgtcgat
gatgctaaggaaatggtaaacaccaggcaggcctgcactttgctagggattagtgattcc
taccagatgggaatttttcgaatccttgctggcatccttcacttgggcaatgtggagttt
gtgtctcgggattctgacagctgcactgttcctccaaagcatgaacccctcaccatcttc
tgcgacctcatgggtgtggagtatgaagagatggcccactggctttgccataggaagctc
gcaactgccaccgaaacctacatcaagccaatttctaaacttcatgccatcaatgccaga
gacgcacttgccaaacatatctatgctaatctctttaactggattgtagatcatgtgaac
aaagcccttcatgctactgtaaaacagcattctttcattggagtgttggacatttatgga
tttgagacattcgaaatcaacagttttgaacagttttgtatcaactatgccaacgaaaaa
ctgcagcagcagttcaatatgcatgtctttaagctggaacaagaagaatatatgaaggaa
caaataccctggaccttgattgatttctatgacaatcagccttgcatcaacctcattgag
gccaaaatgggagttctggatctgctggatgaggagtgcaagatgccaaaaggctcggat
gacacttgggcccaaaaactgtacaatactcatttgaataaatgtaccctttttgaaaaa
ccacgtttatcaaataaagcttttatcatcaagcactttgctgacaaggtggaatatcaa
tgtgaaggctttttggaaaagaataaagacacagtttatgaagaacaaattaaggtccta
aaatcaagtaagtttaagttgctcccagagttattccaggatgaggagaaggtcctcagt
cccacatcagcaaccccttcagggcgcgtgcctttgtctcggacggctgtaaaaccagcc
aaggccaggccaggtcaagccagcaaggagcataagaaaactgtgggacatcagtttcga
aactctcttcatctgctgatggaaaccctaaacgctacaactccacactacgttcgctgt
attaagcctaacgacttcaaatttcctttcacatttgatgaaaagcgggcagtgcagcag
ctgagagcttgtggtgtcctggagaccatccgaatcagtgcagctggcttcccctccagg
tggacgtaccaagagttcttcagccgttaccgtgttctcatgaagcagagagatgtcctt
agtgaccgaaagcagacatgtaaaaatgtcctggagaagctgattctggacaaggataag
taccagtttggtaagacaaaaatatttttccgggctggtcaagtagcctatctggaaaaa
ataagggcagataagttgagagctgcctgtattcgcatccaaaagatgatccgaggctgg
ctgatgcgaaagaagtacgtgcgtatgaggaaggctgccatcaccattcagagatatgtc
agagggtaccaggcacgatgctatgccaagttcctgcggagaacacgggctgccatcact
atccagaagttccagcgcatgtatgtggtccgcaaaagataccagtgcatgcgagatgct
actattgctcttcaggctctcctgagaggttacatggccaggaacaagtaccaaatgatg
cttcgggagcacaagtctattattattcagaaacatgtcagaggctggctggctcgagtg
cactacagcaggaccttgaaggcaattgtttatttgcaatgctgctaccggcgcatgatg
gccaagagggagctgaagaaactgaagatagaggcccggtctgtagaacgctacaagaag
cttcacattggcttggagaacaagatcatgcagctgcagcgaaaaattgatgagcagaac
aaagaatacaaatctctgctggagaagatgagcaacctggagatcacatacagtacagag
acagagaagctgcggagtgatgtggagaggcttcggatgagtgaagaggaggctaaaaat
gcgaccaaccgtgtcctcagccttcaggaggagatcgccaagctccagaaggagctgcac
caaactcagtctgagaagaagaccattgaggaatgggcagacaaatacaaacacgaaacg
gagcagctggtatcagagctgaaagaacagaacacattactgaaaacagaaaaggaggag
ctgaaccgccgcatccatgaccaggcgagggaaataacagagacgatggagaaaaagcta
gtggaggaaacaaaacagctagagctagatctgaatgatgaacggttacggtaccagaac
ctcctgaatgagttcagccgtttagaggagcggtatgatgacctcaaggatgaaatgaac
ttaatggtgagcatccccaagcctggacacaaaagaacggattcaactcacagtagcaat
gaatctgaatatacttttagctctgagatcacagaagcagaagacttaccagtgaggatg
gaggaaccaagtgagaaaaaggcaccattggatatgtctctgttcctcaagctgcagaaa
cgggttacagagctggagcaagaaaagcaatccctgcaggatgagctggacagaaaggaa
gaacaagctctccgtgctaaagctaaggaggaggaaaggcctcccataagaggtgcagag
ttggagtatgagtcgctcaagcgtcaagaacttgagtctgagaataaaaaactgaagaat
gagttgaatgagctgcagaaggccctcacagaaacgcgatctccagaggtaactgctccc
ggtgcccctgcgtatcgagtcctcctggatcagctcacttcagtaagtgaagagcttgaa
gtacgtaaggaagaagtcctcatcctgaggtctcagcttgtgagccagaaagaggctatt
caacccaagaataccatgacagattctacaatcctcttggaggatgtacagaagatgaaa
gacaagggagaaatagcacaggcgtatattggactgaaggaaacaaacaggcaatctccc
caggactatcatatgctgaatgaggacggagaactttggctggtttatgaagggttaaaa
caagccaacaggctgctggagtctcagcttcagtcacagaagaagagccacgagaatgaa
ctggaactgctgcgaggtgagatccaaggtctgaaggaagaaaacaatcgccagcagcag
ctcctggcccagaacctgcagctgcctcccgaggcccgcatcgaagccagtctccagcat
gagatcacccggctgactaatgagaacctgttttatgaggagttgtatgcagatgatccc
aagaagtatcaatcgtaccggatttcactttacaaacggatgcttgatttaatggagcag
cttgaaaagcaagacaaaactgttcgcaagttaaagaaacagttgaaagtatttgctaag
aagattggtgaacttgaagtgggccagatggagaacatatcacctggacaaatcatcgac
gaacctattcgtccagttaacattccacggaaagaaaaggacttccaagggatgttagaa
tataagaaggaggatgaacaaaaacttgtcaagaatcttattttagagctgaaaccacgc
ggagtagccgtcaacctcattccaggactaccagcatatattttgttcatgtgtgtgcgc
cacgcggattaccttaatgatgaccaaaaagtgcggtcattgttgacttccactatcaat
ggcatcaagaaagtgttgaagaaaagaggtgatgactttgaaacagtgtccttctggctg
tctaacacctgccgatttttgcactgtttgaagcaatatagtggagaagaggggtttatg
aagcataatacacctcgtcaaaatgaacactgcctcactaattttgatttagctgaatac
cgacaagtactgagtgacttggctattcagatctaccaacaacttgtgcgagtgttggaa
aacattctgcaaccaatgattgtttcaggaatgctggagcatgagaccatccagggtgtc
tcaggggtgaagccaacagggctgcggaagagaacatccagcattgctgatgaaggaacc
tacactttagactccattattcggcagctgaactctttccattcagtgatgtgtcagcac
ggaatggatccagagctcatcaaacaggttgtcaagcagatgttctacatcattggggcc
ataacgcttaataatcttctcctgcgcaaggatatgtgctcatggagcaaaggaatgcag
ataagatacaatgtgagtcaactggaagaatggctacgtgataaaaatttaatgaatagt
ggagctaaagaaacactggaaccactcatccaggctgcacagttgttgcaagtaaagaag
aaaacggatgaagatgcagaagccatttgttcaatgtgcaatgcactcaccactgcccag
attgtaaaagttctgaatttgtatactccagttaatgagtttgaagagagagtcttggta
tcatttatacgtacgatacagatgcgcctgagagacaggaaggactctcctcagttgctc
atggatgctaaacacatctttcctgttacttttccatttaatccatcctctctagcatta
gaaaccattcagatcccagccagcttaggcctgggcttcatatcacgtgtctga
DBGET
integrated database retrieval system
