Caloenas nicobarica (Nicobar pigeon): 135992443
Help
Entry
135992443 CDS
T11056
Symbol
ACAN
Name
(RefSeq) aggrecan core protein isoform X1
KO
K06792
aggrecan 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cnic00535
]
135992443 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
cnic00536
]
135992443 (ACAN)
04091 Lectins [BR:
cnic04091
]
135992443 (ACAN)
Proteoglycans [BR:
cnic00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
135992443 (ACAN)
Glycosaminoglycan binding proteins [BR:
cnic00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
135992443 (ACAN)
Lectins [BR:
cnic04091
]
C-Type lectins
Lecticans
135992443 (ACAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
CTD
Sushi
V-set
EGF
hEGF
EGF_CA
Motif
Other DBs
NCBI-GeneID:
135992443
NCBI-ProteinID:
XP_065497670
LinkDB
All DBs
Position
10:complement(15606992..15633901)
Genome browser
AA seq
2089 aa
AA seq
DB search
MTTLLLVFVCLRVITAAVTTELSDSSDGLEVKIPEQSPLRVVLGSSLNIPCYFNIPEEED
TSALLTPRIKWSKLSNGTEVVLLVATGGKIRLNSEYREVISLPNYPAIPTDATLEIKALR
SNHTGIYRCEVMYGIEDRQDTIEVLVKGIVFHYRAISTRYTLNFEKAKQACIQNSAVIAT
PEQLQAAYEDGYEQCDAGWLADQTVRYPIHWPRVQCYGDKDEFPGVRTYGVREPDETYDV
YCYAEQMQGKVFYATAPEKFTFQEAFDKCHSLGARLATTGELYLAWKDGMDMCSAGWLAD
RSVRYPISRARPNCGGNLVGVRTVYLYVNQTGYPHPDSRYDAICYSGDDVETLVPGQFID
ERGSELGSAFTIQTVTQTEVELPLPRNATEEEARGSIATLEPIEITPTATELYEGFTVLP
DLFATGVTVETAAPEEENVTRGDVTEVWAVPEEVTTVTLGTLITTQTAEMSSVEETMGAT
ATPGLESASVFTVEDQLVRVTAAPGVGLLPEQPISPTGVVFHYRSATSRYAFSFVQAQQA
CLENNAVIATPEQLQAAYEAGFDQCDAGWLRDQTVRYPIVNPRSNCVGDKENSPGVRSYG
MRPASETYDVYCYIDRLKGEVFFATQPEQFTFPEAQQYCESQNATLASVGQLHAAWKQGL
DRCYAGWLADGSLRYPIVSPRPACGGDAPGVRTVYQHYNQTGFPDPLSRHHAFCFRALPP
VEEDGVTSFFEEDALATQVIPGVEGVPSGEEVTVETEFATQPENQTAWGTEVLPTDVSLF
PVSPSAFPPATIIPEETSTNATISEVSGEVTESGEYQVSGETSASGLVHEVPDASGEPTS
GVFELSGEHSGIGESGLPSVDLHASGFLPGESGLPSVDLSGVPSGIVDISGLTSGEEDVS
VSTSRTPEISGLPSGVESSGLPSGFSGEISGTELVSGVSSGEESGLASGFPTISLVDTTL
VEVVTTVPERQEEGKGSVGVSGDGDLSGFPSAEWDTRGGTYGLPSGAELSGEPSGEPELS
GEPSGVPELSGLPSGLDVSGEPSGTHEVSGLVDLSGLTSGVDGSGEALGVTFVDARLEEV
TTTLSITRAEAKEILEFSGLPSGGGDTSGMVSGSLDIRGEPSGHVEFGGSISGVLEMSGH
PSGVIDSSGEVSGVDVTSGLLSGEESGLTSGFPTVSLVDTTLVEVVTQTSVAQEVGEGPS
GMIEISGFPSGDRGLSGEGSGAILTSGFASGTGDFSGEPSGIPYISGDISGTTDLSGQSS
AVTDASGEASGLPEVTLVTSDLVEVVTRPTVSQELGGETAVTFPYSFEPSGEASASGELS
GETSAWPESGIETSTAYEISGETSAFPETSIETSTIQEISGETSAFPETSVETSTIHEIS
GETSAFPEFSIETSTIQEISGETSAFPEIIIETSTKTSTMQEISGETSSFPEIRIETSTV
QEISGETSAFPEIRIETFTSQEARGETSGYPEISIETSTVHETSGETSAFPEIIIETSTV
HEISGESSAFPEISIETSTVREISGESSAFPEIRIETSTNQEARGETSAYPEISIETSTV
HETSGETSAFPKISIETSMVHEISGETSAFPEISIETSTSQEAQGETSAFPEINIETSTV
HEISGETSAFPEISIETQTSQEARGETSVYPETNIETSTVQEVSGETSAFPEIRIETSTS
QEVQGETPAFSETNRETSTVHKTSGEASSLPAANIKTAATSLAHGEPSGAPEEKEIPDTT
SGAVTHSITGVSGETSVPDFVISTSTPDVEPTRGHRNPEEAQLEIEPSPPTVSEQQTETD
VVLDNPDLLATATAVLPQVSQEAIDALGPTTEDTDECHSSPCLNGATCADGIDSFKCLCL
PSYGGDLCEIDLQNCEEGWTKFQGHCYRHFEDRETWMDAENRCRQYQAHLSSIITPEEQE
FVNSHAQDYQWIGLSDRAVENDFRWSDGHSLQFENWRPNQPDNFFSAGEDCVVMIWHEQG
EWNDVPCNYHLPFTCKKGTVACGDPPVVENARTFGRKKDRYEINSLVRYQCNQGYIQRHV
PTIRCQPNGQWEDPRISCINPSNYQRRLYKRSPRSQSRLSSRAVHRPTH
NT seq
6270 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttactattagtgtttgtgtgtttgcgagtcatcacagcagccgtcaccacg
gagctctcagacagtagtgatggcctggaagtgaagatacccgagcagtctcccctacgt
gttgtcctgggaagctcattgaacatcccctgttacttcaacatcccagaggaagaagac
accagtgccctgctgaccccacggatcaaatggagcaaactctcaaatggaaccgaagtt
gtcttgctagtggccactggtgggaaaatccggctcaacagcgagtacagggaggtgatt
tctttgcccaattatcccgccatccccaccgatgccactttagaaatcaaggcgctgaga
tccaaccacactgggatttatcgctgtgaagtgatgtacgggattgaggacagacaagac
acaatagaggtcctagtgaaaggcatcgtattccactacagagcaatctccaccaggtac
accttgaactttgagaaagcaaagcaggcctgtatccagaacagcgctgtcattgctact
cccgagcagctgcaagctgcctacgaggatgggtatgagcagtgtgatgctggctggctg
gctgaccagactgtcaggtatcccatccactggccccgggtgcagtgctatggcgacaag
gatgaatttccaggagtgaggacctacggtgtccgtgagccagatgaaacctatgatgtt
tactgctatgcagagcaaatgcaaggtaaagtcttctacgccactgcccccgagaagttc
accttccaagaagcttttgacaaatgccacagtttgggagcccgtttggccaccacagga
gagctgtacttggcctggaaggatggcatggacatgtgcagcgcaggctggctggccgat
cgcagcgttcgctaccccatttccagagcacggcccaactgcggaggaaacctggtgggc
gtgcggacggtgtacctgtacgtcaaccagacagggtacccgcaccccgactctcgctac
gatgccatctgctatagcggggatgacgttgagactctggtcccagggcagttcatcgat
gagaggggaagcgagctgggcagcgctttcaccatccagacagtcacccagaccgaggtg
gagctacctctgccacgcaacgccacggaggaggaggcccgtggcagcatcgccaccctg
gaacccattgagatcacccccaccgccaccgagctgtacgagggcttcactgtcctgcca
gatctctttgccactggtgtcacagtagagacagctgccccagaggaggagaacgtgacc
aggggggatgtcacagaggtgtgggctgtacctgaagaggtcaccaccgtaaccttaggc
actctcatcaccacccaaacagcagagatgagttcagtggaggagacaatgggggcgact
gccacaccaggactagagtctgcctcggtgttcacagtggaagatcagctcgtgcgagtg
acagcagcccctggtgttggtctcctacctgagcagcccatctcccccacgggtgtggtg
tttcactaccgctccgccaccagcagatacgctttctccttcgtccaagcccagcaggcc
tgcctggagaacaacgcagttattgcaactcccgaacagctccaggctgcctacgaggct
ggctttgaccagtgcgatgccggctggctgcgggaccagacggtcaggtatcccatcgtg
aatccccgaagtaactgtgtaggggacaaagagaactccccaggtgtgcggtcatacggc
atgcgcccagcctcagagacctatgacgtctactgctacatcgacaggctcaagggtgag
gtgttctttgcaacccagccagagcagttcaccttcccagaagctcaacagtactgtgag
agccaaaatgccacgctggcctctgttggccaactccatgctgcctggaagcagggcctg
gacagatgctacgctggctggttagccgacggcagcctccgctaccctatcgtgagcccc
cgtcccgcttgcggaggggatgcgcctggtgtgagaaccgtctaccagcactacaaccag
acaggatttcccgacccgctgtcccggcatcacgccttctgcttcagagctctgccacct
gtggaggaggatggagtcacctcgttctttgaagaagacgcactggcaacccaagtgatc
cctggagtggagggggtaccctccggagaggaggtaaccgtggagaccgagtttgccact
caacctgagaatcaaacagcttgggggacagaggtcttaccaaccgatgtgtcgctgttc
ccagtgagcccatctgcttttcctccggccaccataataccagaggaaacaagtaccaat
gctaccatcagcgaagtgtcaggggaggtgactgaatctggagaatatcaagtcagtggt
gaaacttcggcatctgggttggtacatgaagtcccagatgcaagtggagaaccgacttct
ggagtttttgaacttagtggagaacactcagggatcggagaaagtggattaccatctgta
gacctgcatgctagtggctttctacctggagaaagtgggctaccctcagtggacctgagc
ggtgtgccttctggcattgttgacatcagtggcttaacttctggagaggaagatgtatca
gtgtctacttcgaggacaccagaaattagtgggctgccatctggagtggaaagcagtggg
ctgccttctggctttagcggagaaatttctggcactgagctggtcagtggtgtgtcttct
ggagaggaaagtggacttgcctctggttttcctaccatctctcttgtggataccacattg
gtggaagttgtcacaacagtaccagaacgacaagaggaaggaaaaggatccgttggagta
agcggtgatggagatctgtcagggttcccatctgctgagtgggacacccgtggaggaacc
tatgggttaccctcaggagctgagctcagtggggaaccctctggagagcctgagctcagc
ggggaaccttctggggtgcctgagctcagtgggttgccctcaggactggatgtcagtgga
gaaccatctggaacgcatgaggtcagtggcctggtggacctaagtggccttacttctggt
gtcgatggaagcggtgaggctttgggtgttacctttgtagacgctcgtttggaggaagtg
acaacaaccctctcaattacaagagcagaagcaaaagagattttggaattcagtggatta
ccttcaggaggtggagacacatcaggcatggtatctggaagtttagacatccgtggtgag
ccttctgggcatgtagagtttggtgggagcatttctggagtgctcgagatgagtggacat
ccgagtggagtgattgacagcagtggagaagtctctggtgttgatgtcaccagtggccta
ctgtctggagaggaaagtggactcacctctggctttcccacagtctctcttgtggatacc
actttggtggaagttgtaacacagacatcagttgctcaagaggtgggagaaggaccatcc
gggatgatagaaatcagtggatttccttctggagacagaggactatctggagaagggtct
ggagctattttgaccagtgggtttgcttcagggacaggagacttcagtggagagccatct
gggatcccgtacatcagtggagacatttctggaaccacagatctaagtggacaatcttca
gcagtgacggatgctagtggggaggcctcagggcttccagaagtcactttagtcacttct
gatttagtagaagttgtgacaagaccaacagtatcacaggaactgggtggggaaacagct
gttacatttccctacagttttgagccaagtggtgaggcctctgcatctggtgaattaagt
ggggaaacatctgcatggccagaaagtggtatagaaacatcaacagcttatgaaatcagt
ggtgaaacatctgcatttcctgaaactagtatagaaacatccacaattcaagaaatcagt
ggggaaacctctgcgtttcctgaaactagtgtagaaacttccacaattcatgaaatcagt
ggggaaacatctgcatttcctgaatttagtatagaaacatcaacaattcaagaaatcagt
ggggaaacatctgcattccctgagattatcatagaaacatccacgaaaacatccacaatg
caagaaatcagtggggaaacatcttcttttcctgaaattagaatagaaacatcaacagtt
caagaaatcagtggggaaacatctgcatttcctgaaattagaatagaaacattcacaagt
caagaggccaggggtgaaacatctggctatcctgaaataagcatagaaacatccacagtc
catgaaactagtggagaaacatctgcctttcctgaaattataatagaaacttccacagtc
catgaaattagtggagaaagttctgcatttcctgaaattagcatagaaacttccacggtc
cgtgaaattagtggagaaagttctgcatttcctgaaattagaatagaaacatccacaaat
caagaagccaggggtgaaacatctgcctatcccgaaattagcatagaaacatccacagtc
catgaaaccagtggggaaacatctgcatttcccaaaatcagcatagaaacttcgatggtc
cacgaaatcagtggtgaaacatctgcatttcctgagattagcatagaaacatccacaagt
caagaagcccaaggtgaaacatctgcatttcctgagattaacatagaaacttccacagtt
catgaaatcagtggggaaacatctgcattccctgagattagcatagaaacacaaacaagc
caagaagccaggggtgaaacgtctgtctaccccgaaactaacatagaaacatccacagtt
caagaagtaagtggagaaacctctgcatttcctgaaattagaatagaaacatccacaagt
caagaagtgcagggtgaaacacctgcattttctgagactaacagagaaacatccacagtc
cacaaaaccagtggagaagcatcctcattgcctgctgctaacatcaaaacagctgccaca
tctttggctcatggtgagccctctggtgctcccgaggagaaggaaattcctgatacaaca
tctggagctgtgacacactcaatcacaggtgtttcaggggaaacctctgtcccagacttt
gtaattagtaccagtactccagatgttgaaccaacacgaggacacaggaaccctgaagag
gctcagcttgaaatagagccatcccctcccacggtgtcagaacaacagacagagacagat
gttgttctagataaccctgatctgctggccaccgctacagctgtcctgcctcaagtgtca
caagaagcaatagatgcattaggacccaccacagaagacactgatgagtgccactcaagc
ccctgtctgaatggagctacctgcgctgatggcatcgactctttcaaatgcttatgcctt
cccagctacggaggggacctgtgtgagatcgacctgcaaaactgtgaggaaggctggacc
aagttccagggccactgctacaggcactttgaagacagggagacttggatggatgcagag
aacaggtgccgacaatatcaagcccacctgagcagtatcatcaccccagaggaacaagag
ttcgtgaacagccacgcacaggactaccagtggatcggcctcagtgacagagccgtggag
aatgactttcgctggtccgacgggcactctctgcaatttgagaactggcggcccaaccaa
cctgataacttcttctcggcgggtgaggactgcgttgtgatgatctggcacgagcaaggc
gaatggaacgacgtcccctgcaactatcacctccctttcacctgcaagaaaggaacagtg
gcctgtggggaccctcctgtcgtggagaatgccaggaccttcggtcggaagaaggaccgc
tacgaaataaactccctggtgcggtaccagtgcaaccaaggctacatccagcgccacgtg
cccacgatccggtgccagcccaacgggcagtgggaggatccgcggatatcctgcataaac
ccctccaactaccagcgcaggctatacaagaggagccccaggagccagtcaagactcagc
agcagagccgtgcacagacccacccattag
DBGET
integrated database retrieval system
