Caloenas nicobarica (Nicobar pigeon): 135992444
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Entry
135992444 CDS
T11056
Symbol
GABPA
Name
(RefSeq) GA-binding protein alpha chain
KO
K09441
GA-binding protein transcription factor, alpha
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135992444 (GABPA)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Ets-type
135992444 (GABPA)
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Gene cluster
GFIT
Motif
Pfam:
Ets
GABP-alpha
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
135992444
NCBI-ProteinID:
XP_065497675
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Position
1:complement(127332057..127355178)
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AA seq
455 aa
AA seq
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MTKREAEELIEIEIDGTEKQECTEESIVEQTYTTAEFVSQAIDINEPIGNLKKLLEPRLQ
CSLDAHEICLQDIQLDPDRSLFDQGVKTDGTVQLSVQVISRQGIEPKLNILEIVKPVETV
EVVIDPDAHHAEAEAHLVEEAQVITLDGTKHITTISDETSEQVTRWAAALEGYRKEQERL
GIPYDPVQWSTDQVLHWVVWVMKEFSMTDIDLNALSIPGRELCSLSQEDFFQRVPRGEIL
WSHLELLRKYVLASQEHSGEIATVTIDQPVQIIPASVQPATPTTIKVINSSAKAAKVQRA
PRISGEDRSSPGNRTGNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQPELVAQK
WGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLVT
ECEQKKLAKMQLHGIAQPVTAVALATASLQTEKES
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgactaagagagaggcagaggagctgatagaaatagaaattgatggaactgagaaacag
gaatgcactgaagagagcatcgttgagcaaacctacaccacagcagagtttgtaagtcaa
gctattgacatcaatgaaccaattggaaatctcaagaagctgctggaacccagactgcag
tgctccttggatgcacatgaaatttgcctgcaagatatccagttggacccagatcgaagc
ctttttgatcaaggagtaaaaacagacggaacagtgcaactcagtgtgcaagtaatatct
aggcaagggatagagcccaagttaaacatccttgaaattgtgaagcctgtggagactgtg
gaggtggtgattgatccagatgctcatcatgcagaggctgaagctcaccttgttgaggaa
gctcaagtgataaccttggatggaacaaaacatatcacaacaatttcagatgaaacctct
gaacaagtgacacgatgggctgcagcgttggaaggctaccgaaaggagcaggagcgcctt
ggaataccctatgacccagtgcagtggtcgacagaccaggtgctccactgggtggtgtgg
gtgatgaaggagttcagcatgacggacattgacctcaatgcactcagcattcccgggcgg
gaactctgcagcctcagccaggaagacttcttccagcgcgtcccgcgaggagaaatcctc
tggagccatttggagcttcttcgaaagtatgtgttggctagccaagaacattctggagaa
atagcaactgttactattgatcagcctgtgcagattattccggcatctgtacagcctgct
acccccaccaccattaaagtaataaacagcagtgcaaaggcagctaaagtacagcgagct
ccaaggatctctggagaagacagaagttcccctgggaacagaacaggaaacaatggccag
atccaattgtggcagtttttattagaacttctcactgacaaagatgctcgggactgtatt
tcttgggttggtgatgaaggagaatttaaattgaatcaacctgaactggttgcgcaaaaa
tgggggcagcgtaaaaacaaacccacaatgaactatgagaaacttagtcgggctttgagg
tattactatgatggagacatgatctgcaaagtgcaaggcaagaggtttgtgtacaaattt
gtctgcgacttgaaaactctcattggctacagtgcagcagagttgaaccggttggtcacg
gagtgtgagcagaagaaactggccaagatgcagctccatggcatcgcgcagccggtcaca
gctgtggctctggccacggcctccctgcaaacagagaaggagagctaa
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