Caloenas nicobarica (Nicobar pigeon): 135992483
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Entry
135992483 CDS
T11056
Name
(RefSeq) uncharacterized protein LOC135992483 isoform X1
KO
K16330
pseudouridylate synthase / pseudouridine kinase [EC:
4.2.1.70
2.7.1.83
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic00240
Pyrimidine metabolism
cnic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
135992483
Enzymes [BR:
cnic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.83 pseudouridine kinase
135992483
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
135992483
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Indigoidine_A
PfkB
Motif
Other DBs
NCBI-GeneID:
135992483
NCBI-ProteinID:
XP_065497754
LinkDB
All DBs
Position
1
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AA seq
702 aa
AA seq
DB search
MIRKITYSLGRHVSAAACGTTQVRRLLHGAYFRIQPSVQEALMEGRAVVALESTIITHGM
AYPQNLSMAREVEEIVTANGAVPATVGILRGRIHVGLTDEELEFLASSKNVVKVSRRDLP
FILSQGLSGGTTVSGTMIAAHKAGIPVFVTGGIGGVHRGGENTLDVSADLTELGRTPVAV
VSAGVKSILDIGRTLEYLETQGVCVAAFGESREFPAFFSRQSGFQAPYHVRNEEEAAELI
ASALGLGLSSGVLIAVPCPQERAASGQVIEEATQQALSEARSKGITGKELTPFMLQKINE
ITDGKSLDSNLALIQNNARVGSCIAVALSRLQKARRKGKLPQRGNTIAPQPVVIGGINVD
FIAKALNPVILDGGQTNAGRVRRTFGGVGRNLADCLSRLGLTPLFLSAIGKDEHSESLLS
YCRHMDMSTVLQLEGKSTATYCAVVTSAGELSVGLGDMDIHQQITEQYVSQFKENLCQAP
LVCIDGNVPLSTIQYVCQLAREHQLAVCYEPTDENKASKPFLSDSWKALTCISPNLQELR
AINRTLGNPLPAELPSRLEDVLQTAMALARPLLAHLHCVVVTLGAHGVLLCGKSLGGSIS
LCPGAHKQTAAASLCATHYPAIHVGREEIVNVSGAGDSLMAGILAGMLTQHDTDTCVRMG
LLAASLSLRSYEPISPEISILSVNQEQVKSRSWPEVQVWKMD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgattaggaagataacgtacagcctgggaagacatgtgtctgctgcagcatgtgggacc
acccaggtgagaagacttctgcatggtgcttatttcaggattcagccttccgtacaggag
gccctgatggaggggagagcagtcgtagccttggaaagcaccatcattacacatggcatg
gcctatcctcagaatctgagcatggccagagaggtggaagaaattgtaacagcaaatgga
gcagttccagccactgtaggtattttaaggggtcgaatccacgtgggactcacagacgag
gaacttgaattcttggcaagcagtaaaaatgttgttaaagtatctcggagagatcttcct
ttcatcctcagccagggcttgtccggcggcactaccgtgtctggaactatgattgctgca
cacaaagcaggaatccccgtatttgtgacgggcggcataggaggtgtccatcggggagga
gagaatactctggatgtgagtgccgacttgacagagctgggacgaactccggttgctgtt
gtatctgcaggagtcaagtctatccttgatattggcaggacactggaatatctggagacc
cagggagtctgtgtggctgccttcggggagtcaagggagttcccagccttcttctcacgt
cagagtggcttccaggcaccgtatcatgtccggaacgaagaggaggcagctgaactcatc
gccagcgctttgggactaggcctgagcagcggggtgctgatagcggtgccctgtccccag
gagcgagctgcctcaggccaggtcatcgaagaggccacccagcaagctctcagcgaagcc
aggtccaaaggcatcaccggcaaagaactgactccttttatgttacagaagatcaacgaa
ataactgatgggaaatcgctggactccaaccttgctctgatccagaacaatgccagagta
ggcagctgcattgcagtggccctgagcagactacagaaagccagaaggaaggggaagctg
cctcagcgagggaacacaatcgcacctcagccagtggtgattggcggtatcaacgttgac
tttatagccaaggcgctgaaccctgtcatcctggacggtgggcagacaaatgctggaaga
gtgagacgaacctttggcggcgttggaagaaacttggcagactgcttaagccgtcttggg
ctgactccgctctttttatcagccatagggaaggatgagcattcagagtctctcctgagc
tactgtcgccacatggacatgagcaccgtcctgcagctggagggtaagagcacagccacg
tactgtgctgtggtcaccagtgctggggagctcagcgtcggcttgggagatatggacatc
caccagcagataacagagcaatacgtgtcccagttcaaggagaacctgtgccaggcccct
ctagtttgcattgatggaaatgtgcctctttccactattcagtatgtctgccaactagct
agggagcatcaactggcagtgtgctatgagccgacagatgagaacaaggcctctaagccg
ttcctctcagacagctggaaagcactcacatgcatttcccccaacctgcaagaactaaga
gcaataaatcggaccctcgggaaccctctgccagcagagctgccatccaggttggaggat
gttctccagactgcaatggccctggctcgccctttgctggcccacctgcactgtgtggtg
gtgaccctcggcgctcacggtgtcctcctgtgtggcaagagcctgggagggagcatctcg
ctttgtccaggagctcacaagcagactgctgccgccagcctctgtgccacccactacccc
gccatccacgtcggcagggaggagatagtcaatgtctcaggagctggtgacagcttaatg
gcaggaatcctcgcaggaatgcttactcaacatgacacagatacctgtgtccggatgggt
ctgcttgctgcaagcttgtctctccgttcctacgagcccatttccccagaaatcagcatt
ttgagtgtcaaccaggaacaagtcaagagcaggagctggccagaggtgcaggtatggaag
atggactag
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