Caloenas nicobarica (Nicobar pigeon): 135992490
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Entry
135992490 CDS
T11056
Symbol
AFG2B
Name
(RefSeq) ATPase family gene 2 protein homolog B
KO
K26051
ribosome biogenesis protein SPATA5L1 [EC:
3.6.4.10
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cnic03009
]
135992490 (AFG2B)
Enzymes [BR:
cnic01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.10 non-chaperonin molecular chaperone ATPase
135992490 (AFG2B)
Ribosome biogenesis [BR:
cnic03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
135992490 (AFG2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_5
AAA_16
RuvB_N
AAA_14
AAA_2
AAA_22
Vps4_C
AAA_33
TIP49
Rad17
AAA_7
DUF815
RNA_helicase
AAA_lid_PRS2_C
TsaE
AAA_3
bpMoxR
DUF6497
nSTAND3
ATPase
IstB_IS21
AAA_19
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
135992490
NCBI-ProteinID:
XP_065497762
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All DBs
Position
10:12924439..12931532
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AA seq
757 aa
AA seq
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MEAAALKLLPLDPGDEGTQRCRVGPATLSLLGARLGAPLRISLPAGCCLCTAWPRHDLAD
GFVQADLTCSTAGVTAGDMRGLTLGVGQLELLAYRPLQKVAVKVVLKSSALKKSTSRPVL
QETIRELLRNVYVSLHYVVTVAPNLENPVVYIEILSVDPLTDEAGLITHQTSIKIKEVVT
LEWYTHLSEDSAKTSIAGLDDVEKSLTEMIDLPFRFPKTFKKLGLSVPNGVLLIGPPGVG
KTLMVKAVAREVGAYLLCISGPALYGSRPGESEENLRRVFEKGREMSHEGPTIVFIDEID
SLCPKRGSSNSAPEDRIVAQLLTLLDGVGSEAKMVIIAATNRPDALDPALRRPGRFDREV
IIGTPTLTQRRSILQLLTSTMPISTDVDLVKLAEITTGYVGADLTALCREAAMQAVFRSS
LDSTEMMINIADFQEAFKKIQPSSFRNAIGLTECKPVTWEQIGGLEDVKLKLKQSIEWPM
KFPQAFARMGLSHPKGILLYGPSGCAKTTLVKAVATSCHCSFLSISGADLFSPYVGDSEK
ILSQVFRQARANTPAIIFLDEIDSILGSRSRCKTACGVSERVLSVLLNELDGIGLKVTER
RGSKLQPEDQCQEQSDEERKLEFQESLNKDFMVVAATNRPDMLDDALLRPGRLDKVIYIP
PPDLKGRLSILKICTEKIPLDTDVSLDDVAVLTDLFSGADIENLCKEAALLALQENGLEA
TAVKHEHFVKSLRTVKPSLNVKDLEFYEKFYNQVLAS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcagccttaaagctgctcccgctggacccgggagatgaaggcacccagagg
tgcagggtcggacctgccaccctctccttgctgggcgcccggctcggcgctccgctgcgg
atctccctgcccgccggctgctgtctgtgcacggcgtggccccggcacgacttggcggac
gggttcgtgcaggctgacctgacctgcagcaccgcgggggtcactgccggggacatgagg
ggcctcacgctgggggtcggccagctggagcttctggcctatcgcccgttgcaaaaggtg
gctgtgaaagtggtcctgaagagctctgcgcttaaaaagtcgacttccagaccggtgttg
caggagacgatcagagaactgctaagaaatgtttatgtttcacttcattatgttgttact
gttgccccaaatctcgaaaaccccgtggtgtatattgaaatactctctgtagaccctttg
acagatgaagctggactgataacccaccaaacaagcataaaaattaaggaggtggtcact
cttgaatggtacacgcatttatcagaagactctgcaaaaacttccattgcaggactagat
gatgtggaaaagtctttgacagagatgattgatctgcctttccgctttccaaagactttt
aagaagctggggctttctgtccctaatggggtgctactaataggccccccgggtgtaggc
aaaactctgatggtaaaggcagtagcaagagaagtgggtgcgtatctgctctgcatcagt
ggcccagctctgtatggttcgagaccaggagaaagcgaagagaatttgcgaagagtcttt
gaaaagggcagagaaatgtcacatgaaggcccaaccattgtctttattgacgaaattgac
tccttatgcccaaagcgaggaagttcaaatagtgctcccgaagatcgtattgttgctcag
ttgctaacgctactggatggtgtaggtagcgaggcgaagatggtcattatagcagcaaca
aacaggcctgatgccttagaccctgcactgagacgacctggcagatttgacagagaggtg
attattgggacaccaacacttacgcaaagaagatctatcctgcagttgcttacatctact
atgccgatttctacagacgttgatttggttaaactggcagaaattacaactgggtacgtt
ggagctgaccttacagcactctgcagagaagctgccatgcaggctgtgttccgcagctct
ttggattcaactgaaatgatgattaatatcgcagatttccaagaagcttttaaaaaaatt
caaccatcctcttttcgaaacgcaattggactaacagagtgtaaacctgtcacttgggag
caaattggtggtcttgaagatgtgaaattaaagttaaaacagagtattgagtggcctatg
aaatttcctcaggcatttgctaggatgggcctgtctcatccaaagggtattcttctctat
gggccgtcagggtgtgccaaaaccacactggtgaaggctgtggccacaagttgtcactgc
tcctttctctctataagtggtgctgacctcttctcaccttatgttggagattcagagaag
attttgtctcaggtttttcgccaagcaagagcaaatactccagcaattatattcctagat
gagattgattctatcttgggatctcggtcacgctgcaaaactgcctgtggtgtctcagag
cgagttctttctgttcttctcaatgagttggatggtattgggctgaaagtcacagaaaga
agaggaagcaaactacagcctgaggatcaatgtcaagaacaaagtgatgaggaaagaaag
ctagagtttcaggaaagtttgaacaaagatttcatggtagttgctgcaacaaacagacca
gatatgttggatgatgcgttattgcgtcctggaaggctagacaaggtgatctacattcca
cctccagatctgaagggaaggctttccattttgaaaatctgcacagaaaaaattccatta
gatactgatgtgtcattagatgatgtggcagtcctgacagacctcttctctggagctgat
attgaaaatctgtgcaaggaggctgctttgttggcattgcaagagaatggacttgaagca
actgctgtaaaacacgagcattttgtaaaatcattgaggactgtaaaaccatccttaaat
gtaaaagacttggaattttatgaaaaattttataatcaagtattagcttcttga
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