Caloenas nicobarica (Nicobar pigeon): 135992496
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Entry
135992496 CDS
T11056
Symbol
HCN4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cnic04040
]
135992496 (HCN4)
Ion channels [BR:
cnic04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
135992496 (HCN4)
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
135992496
NCBI-ProteinID:
XP_065497769
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Position
10:complement(3256350..3349862)
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AA seq
1202 aa
AA seq
DB search
MDKLPPSMRKRLYSLPQQIGPKASIMDEEEDSDKDTRRKSIRLKPLPSPSAGSTRALGGD
PSRGGDPGLLETEAGSKSAKTSTNGDCRRFKGSLSSLTSRHLHDTAEEKRLIGGEGEPAS
PCEDKSPPGSGELEQGLPASPPPASPPEPQQQPPRACSSTSIKVEGGGGCDQITPDEEQR
LGQTGFIQRQFGAMLQPGVNKFSLRMFGSQKAVEREQERVKSAGFWIIHPYSDFRFYWDL
TMLLLMVGNLIIIPVGITFFKDENTTPWIVFNVVSDTFFLIDLVLNFRTGIVVEDNTEII
LDPQRIKMKYLKSWFVVDFISSIPVDYIFLIVETRIDSEVYKTARALRIVRFTKILSLLR
LLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPD
DCWVSLNRMVNDSWGKQYSYALFKAMSHMLCIGYGQQAPVGMSDVWLTMLSMIVGATCYA
MFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEE
SILGELSEPLREEIINFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGT
IGKKMYFIQHGVVSVLTKGNKETKLADGSYFGEICLLTRGRRTASVRADTYCRLYSLSVD
NFNEVLEEYPMMRRAFETVALDRLDRIGKKNSILLHKVQHDLNSGVFNYQENEIIQQIVQ
HDREMAHCAHNVQAAAAAAASTPTPVIWTPLIQAPLQAAAATTSVAIALTHHPRLPTAIF
RPPVSVLGSLGQQTNQTPRQLKRLQSLIPSTGPSAVGSPSSTPSQLHTPGAETPSSSSFH
IQQLAGFSAAAGLGQFQVGSPPGGSSQPGSSGMSSVGPSQFQHAPSGSPLGTGQPVQQQQ
PPALPSGGFGHFQQATTSSPSTSLTQLSSNSPPSLLNQFQPTTRPLQGGQLQQLSGSGTL
GGMNHFQPPLSSNSPSSSLSQLAQASAGPSSGLCQTHPSALGSLTGTIAQLHQERPPFAS
VSPLQQSGVASPCYTPSGLSPPSQSPVATRTFQCGPSGASGSHGSLLLPQTASPPPQLLP
SKSTLPVPPGRLNQDIKLISASQPSLPQELAQTLSQSSPHSSRESISSFSPFPGGGTGLL
GKPCSSIPGRVTLPRQMSSGSLPHPLVFGAGAAGALTAGGRKESIVLTGDLEPVRSKLPS
NL
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctgcccccctccatgcgcaagaggctctacagcctgccccagcagatagga
cccaaggcgtcgatcatggacgaggaggaagacagcgacaaggacacccggaggaaaagc
atcaggctgaagccgctgccctcgccctctgctgggagcacccgggcgctcgggggagac
cccagcagagggggggaccccggcctcctggagacggaagcaggcagcaagagtgccaag
accagcaccaacggggactgccgccgcttcaaagggagcctgtcctcgctgaccagcagg
cacctccacgacacggccgaggagaagaggctgatcggtggggaaggggagccggcgtcc
ccctgcgaggacaaaagcccccccggcagcggggagctggagcagggactgccagcgtcc
ccaccgccggcgtccccgccggagccccagcagcagccccccagggcttgctcctctacc
tccatcaaagtggaaggaggtggaggatgcgaccagatcaccccagatgaggagcagagg
ctgggccaaaccggtttcattcagaggcagttcggggccatgctccagccgggggtcaac
aaattctccttgaggatgtttggcagccagaaggccgtggagagggagcaggaaagggtt
aagtctgccgggttctggatcatccatccctacagcgacttcaggttttactgggatttg
actatgctgctcctgatggtagggaacctgatcatcatccctgtgggcatcactttcttc
aaggatgaaaacaccaccccatggattgtcttcaatgtggtttcggacacgttcttcctc
atcgaccttgtcctcaacttccgaacaggcattgtggtggaggacaacaccgagatcatc
ctagacccgcagaggatcaagatgaagtacctgaagagctggtttgtggtggattttatc
tcctctatccccgtggactatatcttcctgattgttgagacccgcattgattcggaggtg
tacaagacagcccgggcgctgcgcatcgtgcgcttcaccaagatcctcagcctcctgcgg
ctgctgcggctctcccggctcatccgctatattcaccagtgggaggagatcttccacatg
acctacgatctggccagcgcggtggtgcggattgtcaacctgatcgggatgatgctgctg
ctgtgtcactgggacggctgcctccagttcctcgtgcccatgctgcaggacttccccgat
gactgctgggtgtccctcaaccgcatggtgaatgactcctgggggaagcagtattcctac
gcgctgttcaaggccatgagtcacatgctgtgcattgggtacgggcagcaggcgcccgtg
ggcatgtcagatgtgtggctcaccatgctgagcatgattgtcggtgccacctgctacgcc
atgttcatcggccacgccacagccctcatccagtcgctggactcctcgcggcgtcagtac
caggagaagtacaaacaagtggagcagtatatgtccttccacaagctccccgcagacatg
cggcagcgcatccacgattactacgagcaccgctaccaggggaagatgtttgatgaggag
agcatcctgggggagctgagcgagcctctccgcgaggaaatcataaacttcaactgccgg
aagctggttgcctccatgcccctctttgccaatgcagatcccaactttgtgacgtccatg
ttgaccaagttgcggttcgaggtgtttcagccgggggattacatcatccgggagggcacc
attggcaagaagatgtacttcatccagcacggcgtggtgagcgtcctcaccaaaggcaac
aaggagaccaagctggcagatggctcctactttggagaaatctgcctgctgacgcgtggc
cgccgtacagccagcgtgcgagctgatacctactgccggctctactccctctccgtggac
aacttcaacgaggtgctggaggagtatcccatgatgcggcgagctttcgaaactgtggct
cttgacaggctggacagaattggcaagaaaaattccattctgctgcataaagtccagcat
gacctcaattcgggtgttttcaactaccaggagaacgagatcatccagcagatcgtgcag
cacgacagggagatggcacactgcgctcacaacgtccaggccgccgccgccgccgccgcg
tccacccccacccccgtcatctggaccccgctgatccaggcacccctgcaagctgcagcg
gccaccacttctgtggctatagctctgacccaccacccgcgcctccccactgccatcttc
cgtcctccggtgtccgtgctgggttccttgggacagcaaaccaaccagaccccgagacag
ctgaaaaggctgcagtctctaatcccgtcgacggggccgtctgccgttggctctccctcc
agtactccatcccagctgcacaccccaggagcagaaacaccttcgtcctcttccttccac
atccagcagctcgcagggttctcagctgccgccggcttaggccagttccaggtgggatcc
cctccgggtggctcgagccagccgggttccagcggcatgtcctcggtggggccgagccag
ttccaacatgcgccttctgggtcacccctggggacaggtcagcccgtgcagcagcagcag
ccgccagcccttcccagcggtggctttgggcacttccagcaagccacaactagctcccca
tcaacatcactcacccagctctcatcaaactcaccccccagtcttctcaaccagttccag
cccaccacaagaccgctgcaggggggacagttacagcagctctcgggcagcgggactttg
gggggaatgaatcacttccaaccccctctttcttccaactctccatcctccagcctcagc
cagctggcacaggcctctgctgggccgtcctcaggcctgtgccagacacatccaagtgct
ttaggatcgttaactggaacgatagcccagctccaccaagaacggccgccttttgcctcc
gtgtctccgctacaacagtctggcgtcgcctctccctgttacaccccttctggccttagt
cctcctagtcagagcccggtggcgacaagaacttttcagtgtggcccttcgggggcctca
ggctctcacggatctctgctcctgcctcagaccgccagcccacctccgcagctcctgccg
tccaagagcacgctgcccgtgccgccgggacgtctgaaccaggacatcaagttgatttct
gcttcccagccatctttgccccaggagctggctcagacgctgagccaaagttctcctcat
tcctctagagaatctatttccagcttctccccttttcctgggggagggaccggacttctt
gggaagccttgtagctcaattcctgggcgtgtgactttaccgcgtcagatgtcctcaggt
tctttaccgcatccgctggtgtttggggccggcgctgcaggcgctctgactgctggcggg
cggaaagaatccatagtgctcacaggggatctggaacctgtcagatccaaactgccctcc
aatttgtga
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