Caloenas nicobarica (Nicobar pigeon): 135992518
Help
Entry
135992518 CDS
T11056
Symbol
ARNT2
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator 2 isoform X1
KO
K15589
aryl hydrocarbon receptor nuclear translocator 2
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
135992518 (ARNT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
PAS_4
Per3-like_PAS-A
PAS_2
bHLH_NCOA
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
135992518
NCBI-ProteinID:
XP_065497842
LinkDB
All DBs
Position
10:complement(14863987..14966655)
Genome browser
AA seq
716 aa
AA seq
DB search
MATPAAVNPPEMASDIPGSVALPVAPMASGQVRMAGSMPSRGGKRRSGMDFDDEDGEGPS
KFSRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGN
KSTDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWFGS
TLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRM
RCGNAPLDHLPLNRITTMRKRYRNGLGPVKEGEAQYAVVHCTGYIKAWPPAGMTIPEEDT
DVGQGSKYCLVAIGRLQVTSSPVCMDMNGMSVPTEFLSRHNSDGVITFVDPRCISVIGYQ
PQDLLGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRTKNREWMLIRTSSFTFQ
NPYSDEIEYIICTNTNVKQLQQQQAELEVHQRDGLSSYDLSQVPVPSIPANVHEGGKSVE
KPDAIFSQERDPRFAEMFAGITASDKKMMASASTAGNQQLYSQGSPFQPGHSGKTFSSSV
VHVPGVNDIQSSSSTGQNLTQISRQLNQSQVAWTGNRPPFPGQQIPSQSGKAQSSPFGIG
TSHTYPADPSSYSPLSSPATSSPSGNAYSSLANRSAGFAEGGQSSGQFQGRPSEVWSQWQ
SQHHNQQSSDQHSHPQPSQTEVFQDMLPMPGDPTQGTGNYNIEDFADLGMFPPFSE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgccggcggcggtaaaccctcccgaaatggcatcagatattcctggctcggtg
gccttgccagtggcaccaatggcaagcggacaagtgagaatggcaggatccatgccttcc
agaggaggaaagcgccgttccggaatggacttcgatgatgaagatggggagggccccagc
aaattttcaagggagaatcatagtgaaattgagagacgcaggagaaataagatgacacag
tacatcaccgaactctctgatatggtacccacttgtagcgcattggctcgtaagcctgac
aagttgacaattcttcgaatggccgtttcacacatgaaatcaatgaggggcactggaaac
aaatctactgatggagcttacaagccatcgtttcttacagaacaggaactgaaacatctt
atcctggaggctgcagatgggttcctgtttgtagttgcagctgagacgggaagagtgatc
tacgtatcggattcggtgactcctgtgctgaaccagccacagtctgaatggtttggcagc
actttgtacgaacaggttcatccagacgacgtggagaagctgcgagagcaactgtgtaca
tccgaaaactctatgacaggacgaatcctggacttgaagaccgggacagtgaagaaggag
ggtcagcagtcctcaatgagaatgtgcatgggatcaaggcgctctttcatttgcaggatg
aggtgtggaaatgctcctctggatcatttacctctgaacagaataaccaccatgagaaaa
agatacaggaatggccttggcccagtaaaagaaggcgaagcccagtacgctgttgtccat
tgcactggctatatcaaggcttggccaccagcaggaatgactataccagaagaagacact
gatgtgggacaaggtagtaaatattgcctcgtggcaataggaaggcttcaggtaaccagc
tctccagtgtgcatggacatgaacggcatgtcggtccccacggagttcttgtctaggcac
aattctgatggagtcatcacctttgtggacccaaggtgcatcagtgtcattgggtaccag
ccccaggaccttctggggaaagatattttagagttctgccatcctgaagatcaaagccat
ttgagagaaagtttccaacaggttgtgaagctgaaaggtcaagtcctctctgtgatgtat
cgttttcgtaccaaaaaccgggaatggatgctgatcagaaccagcagcttcacatttcag
aatccttattccgatgagattgaatacatcatctgcaccaacactaatgtgaaacaactt
cagcagcagcaagcagaacttgaagtacatcaaagagatgggctgtcatcctatgactta
tctcaggtgcctgttcccagtataccagctaatgttcatgagggtggaaagtctgtggaa
aagcctgatgctatcttctcccaagagagggatcctagatttgctgagatgtttgctgga
ataactgcttcagataaaaaaatgatggcctcagcatccacagcaggaaaccagcagctt
tactcacagggaagcccatttcagccaggacattcgggaaagactttcagttcgtctgtg
gtgcatgtgcctggtgtgaacgacatccagtcgtcttcatcaacgggccagaatctgaca
cagatttctcgccagctaaaccagagtcaggttgcctggacaggaaatcgcccaccattt
ccaggacagcaaattccgtctcagtctggcaaggctcagtcgtctccctttgggattggg
accagtcacacctacccggcggatccatcctcgtacagccccctttccagccccgccacc
tcctctcccagtgggaatgcctactccagcttagcaaaccgaagtgcaggctttgctgaa
ggtggccagagcagcggccagttccaggggagaccttccgaagtctggtcccagtggcag
agccaacatcacaaccagcaaagcagcgaccagcattcgcacccgcagcccagtcagacc
gaggtgtttcaggacatgctgccaatgccgggagatccgacgcagggtactggcaattac
aacattgaagattttgctgacctgggcatgtttccgccattttctgagtag
DBGET
integrated database retrieval system
