Caloenas nicobarica (Nicobar pigeon): 135992777
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Entry
135992777 CDS
T11056
Symbol
SEMA6D
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
135992777
NCBI-ProteinID:
XP_065498259
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Position
10:12101746..12133599
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AA seq
1088 aa
AA seq
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MRLPLLCASVMLMSLSQCRAVSFPEDEDPINVVDYHYSRQYPVFRGRPSGNESQHRLDFQ
LMLKIRDTLYIAGRDQVYTVNLNEVPKSEVTPSKRLTWRSRQQDRENCAMKGKHKDECHN
FIKVFVPRNDEMVFVCGTNAFNPMCRYYQLSTLEYDGEEISGLARCPFDARQTNVALFAD
GKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWIKEPHFLHAIEYGNYVYFFFREI
AVEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFLKARLNCSVPGDSFFYFDVLQSI
TDIIEINGVPMVVGVFTTQLNSIPGSAVCAFSMDDIEKVFKGRFKEQKTPDSVWTAVPED
KVPKPRPGCCAKHGLAEAYKTSIDFPDETLSFIKSHPLMDSAVPSVIEEPWFTKTRVRYR
LTAIAVDHAAGPYQNYTVLFVGSEAGVVLKILAKTRPFSLNDSVLLEEIEAYNHAKCNAE
SEEDRRVISLQLDRDHHALFVAFSSCVIRIPLSRCERHGSCKKACIASRDPYCGWLDHEA
CGRVTPDMLFSLFISYNHSTGGYVQDVEYGNTAQLGDCHEILPTTATPDYKIFGDPTSDM
EFSSASITTMASIPVISPKVIGSWKPKVTGSRKFVVQDDPNTSDYSDPLSGVPKGVRWEV
QSGESNQMVHMNVLITCVFAAFVLGAFIAGVAVYCYRDIFVRKSRKIHKDAESAQSCTDS
SGSFAKLNGLFDSPVKEYQQNIDSPKLYTNLLTSRKDLPPTGDTKSMMMDHRGQPPELAA
LPTPESTPVLQQKTLQAMKSQSDKAHSNLNASRKETPLKSPQFFPSSPPPHSPLSHGHIP
SAIVLPNATHDYNTSFSNSNAHKADKKMQHSDHPLTKPSSKRDHRRSVDSRNTLNDFLKH
LNETTSNPKAIMGDIQVAHQTLMLDPMGNMSEIPPKVPNREASLYSPPSTLPRNSPTKRV
DVPTTPAVPMTSLERQRGYHKNSSQRHSISALPKNLNSPNGVLLSRQPSINRGGYMPPTA
GTKMDYMQGTPVSVHLQPSLSRQSSYTSNGTLPRTGVKRTPSLKPDVPPKPSFVPQTTSV
RPLNKYSY
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgaggcttcctctgctttgtgcctccgtgatgctaatgagcctgtcccagtgccgagct
gtcagcttccctgaagatgaggaccctattaacgttgttgactaccactattcaaggcaa
tatccagtatttagaggacgcccttcaggcaatgaatctcagcacagactggacttccaa
ctgatgttgaaaattcgagacacactttatatcgctggcagggatcaagtttacactgta
aacttaaatgaagttccaaaatcagaagttactccaagcaagagattaacatggaggtca
aggcagcaggacagagagaactgtgctatgaaaggcaaacataaagatgaatgccataac
ttcattaaagtctttgttccaagaaatgatgagatggtgtttgtctgtggaacaaatgcg
tttaaccctatgtgcagatactatcagctgagtaccttagagtatgatggggaagaaatt
agtggcttggcaagatgcccatttgatgccagacaaaccaatgtcgccctctttgctgat
ggaaaattgtattcagcaactgtagcagatttcctggcaagtgatgctgttatttatcgc
agcatgggggatggatctgccctaagaacaataaagtatgattccaaatggataaaagaa
ccacacttcctccatgctatagaatatgggaactacgtctatttcttcttccgagaaatc
gctgtagagcacaataatttaggcaaggctgtgtattcccgtgtggcacgcatatgcaaa
aatgacatgggggggtcccaaagagtcctggaaaaacattggacatcctttctgaaagct
cggctcaactgctcagttcctggggattcattcttctactttgatgttctgcagtctatc
acagacataatagaaatcaatggagtccccatggttgtcggtgtattcacgacacagctt
aacagcatccctggttcagcagtgtgtgctttcagcatggatgacattgagaaagtcttc
aaagggagatttaaagaacaaaagactcctgactctgtttggacagctgtacctgaagac
aaagtaccaaagccaagacctggctgctgtgcaaaacacggcctagcagaggcttacaaa
acctccattgatttcccagacgaaacactctccttcatcaaatctcatcctctgatggat
tcagctgttccctcagtcattgaggagccttggtttaccaaaacacgtgtcagatacaga
ttgacagcaattgctgtggaccatgctgctggaccgtaccagaactacacagtcctattt
gttggctccgaagcaggagttgtacttaaaatcttggcaaagaccaggcctttttctttg
aatgacagcgtattactggaagagattgaagcatataaccatgcaaagtgtaatgctgag
agcgaggaggacagaagagtcatttcccttcagctggatagagaccaccatgctctgttc
gtggcgttctccagctgcgtcatcagaattcctctgagtcggtgtgagcgtcacgggtca
tgtaaaaaggcatgtattgcttcacgggacccatactgtggctggctagaccatgaggct
tgtggaagggtgacaccagacatgctgttctctttgtttatttcatacaaccacagcact
ggaggatacgtacaagatgtcgaatatggcaacacagcgcaacttggggactgccatgaa
attttgcctactacagctacaccagattacaaaatatttggcgacccaacatctgacatg
gagttctcctcagcttccattaccacaatggcaagtatcccagttatatcacctaaagtg
attggttcctggaaacctaaagtgactggctctcggaaatttgtagttcaagatgaccca
aacacttctgattattctgatccattatcaggtgtcccaaagggtgtaaggtgggaagta
caatcaggagagtccaaccaaatggtacatatgaatgtcctaatcacgtgtgtctttgcc
gcttttgtcctgggagcctttatcgcgggagtggccgtttactgttaccgggatatattt
gtacggaaatccagaaaaatacacaaagatgcagaatcggctcagtcctgtactgactcc
agtgggagctttgctaaactgaacgggctgtttgatagtcccgtcaaggagtatcaacaa
aacattgattcacccaaactttacacaaacctgttgacgagcagaaaggacttacctcca
actggtgatacaaagtccatgatgatggaccacaggggccagcctccggaattagctgcg
cttccaactcctgaatcgacaccagttcttcaacaaaagactctgcaggctatgaaaagt
cagtcagacaaagcgcatagcaacctcaatgcttcacgaaaggaaactccactaaaaagc
cctcagttttttccttccagtcctccaccccactctcctctaagtcacggacatattcct
agtgctatcgttcttcccaatgctacccatgattacaatacgtctttctcaaattctaat
gcgcacaaggcagacaagaagatgcaacatagtgatcatccacttacaaaaccatccagc
aaaagagaccacaggagatccgttgattccaggaacaccctgaatgattttctgaaacac
ttaaatgaaactactagtaatcccaaagcaattatgggagatattcaagtggcccaccag
actttaatgctggatccaatgggaaatatgtctgagatcccacctaaggttcccaacagg
gaggcgtctttatactcacctccatcaacacttccgagaaacagccccacaaaacgagtg
gacgttcccaccactcctgcagtaccaatgacctctttggaaaggcagaggggttatcac
aaaaattcttcacaaaggcattcaatatctgcccttcctaaaaacttaaactcaccaaac
ggtgttttgttatccagacagcctagtatcaatcgtggggggtacatgcctcccacggca
ggcacaaagatggactacatgcaagggacgcctgtcagcgttcacctccagccttccttg
tccaggcagagcagttacacgagcaacggcacccttcctcgtacgggtgtaaagaggaca
ccctccttaaaacccgacgtgccaccaaaaccctcgtttgttcctcagacaacttcagtc
agaccactgaacaaatacagttactag
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