Caloenas nicobarica (Nicobar pigeon): 135992875
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Entry
135992875 CDS
T11056
Name
(RefSeq) contactin-6-like isoform X1
KO
K06761
contactin 3/4/5/6
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cnic04515
]
135992875
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cnic00537
]
135992875
Cell adhesion molecules [BR:
cnic04515
]
Immunoglobulin superfamily
Contactins
135992875
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cnic00537
]
Others
135992875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Sp38
Ig_5
V-set_CD47
Pur_ac_phosph_N
Tissue_fac
C2-set_3
fn3_4
Motif
Other DBs
NCBI-GeneID:
135992875
NCBI-ProteinID:
XP_065498361
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All DBs
Position
11:complement(10916363..11002765)
Genome browser
AA seq
973 aa
AA seq
DB search
MSYHYRLVGGSLAINNPHKKQDIGTYQCLATNSFGTILSRKAKLQFAYLENFETKPRSTV
SVREGQGVVLLCGPPPHYGGLSYTWIFNNNTLHVQEDSRRFVSQETGNLYIAKVEPSDVG
NYTCLVINPKAEQSVQGPPTPLTLRSDGVMGEYEPKIEVRFPETTYAVKGSSVKLECFAL
GNPVPSISWKRSDGNSLAKKIEHYKTKGVLEIPDVQQEDEGAYECIAGNIRGRNIARGQL
FVYALPEWEKKIQNAFLSLYDSLFWECKAKGKPMPSYSWLKNGQPLTSEERIQIENGTLI
IPMLNMSDSGLYQCVAENKYDTIYANAELRVIAAAPDFSKNPVKEMSVVQVGGELTIGCK
PSASPRAVINWRKGSEVLRQNKRIILLEDGSLRLYNITKSDAGVYTCTATNQFGVARNSG
NLIVKERTVITIPPSNMDVTVGESIVLPCQVSHDPSVNVVFTWSFNGHTIDFSRGMHHFE
RIGRESVGDLMIRNIQLHHSGKYVCMVQTTLDSQSATAEIIVRGPPGPPEDVKVEHVSST
TAVLSWKSGIDNNSPVQIYSIQMRTPFSVGWQAVATVPEVINGRTHKATVVDLSPWVEYE
FRVVASNSVGTGEPSRPSALLKTKAAVPVMAPTNISGGGGSRSELVITWEPVPEELQNGE
GFGYTVMFRPLGATTWIKAVVASAEASKYVYRNESITPLCPFEVKVGVYNNEGEGTLSSI
SIVYSGEEEPQIAPAGTSALSISAAEVEVSWQPIAWNRHTGRVLGYEVLYWTDDPKESTA
GKVRVNGNVTARNITGLKANTVYFATVRAYNTAGTGPSSTPVNVTTKKSPPSQPPVNIAW
KLTNSKICLNWEHVKTMENESEVLGYKILYRQNRHSKTHILETSNTSAELLVPFEEDYLI
EIRTVSDGGDGSSSEEIRIPKISRNIAICSKVRAPKSCSSISASWLRHTDVALRCHKANV
TAVYHDCSEAFPN
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcactacaggttggttggaggcagcttggcaatcaataacccacataaaaaa
caggatattggaacataccagtgtctggccacaaattcatttggaacaattctgagcagg
aaggcaaagcttcaatttgcatatcttgaaaattttgaaacaaaaccaagaagcacagtg
tcagtcagagaaggacaaggagtggttctactctgtggtcctccaccacattacggaggc
ttgtcctatacatggatcttcaacaataataccttacatgttcaggaagatagtcgccgc
tttgtttcacaagagacgggaaatctgtacattgccaaagtggagccatcagatgtgggc
aattacacctgccttgtaattaacccgaaagcagagcaaagtgtgcaggggccacccact
cctctcactctccgcagcgatggtgtgatgggggagtatgaaccaaagattgaagtacgt
tttccagaaacaacatacgcagtgaagggctcatctgttaaactggaatgctttgccctt
ggaaatcctgtccctagtattagctggaagaggtctgatggaaactcattggcaaagaaa
attgaacactacaaaaccaaaggagttcttgaaatcccagatgttcagcaggaagacgaa
ggcgcttatgagtgcattgcaggaaacattcgaggaagaaacattgcaagaggtcaatta
tttgtctatgcactcccggaatgggaaaaaaaaatacaaaatgcctttctgtctctctat
gacagtttattttgggagtgtaaggcaaaaggaaaaccaatgccttcctacagttggtta
aaaaatggccagccactcacatcagaggaaagaattcaaatagaaaatggaactcttatc
atacctatgttgaatatgtcagactctggcctctatcagtgtgtggcagaaaataagtac
gatactatttatgccaatgctgagttgcgggtgatagctgcagcacctgatttttccaaa
aatcctgtgaaagaaatgtctgttgttcaagttggaggtgaacttacaattggttgtaaa
ccgagtgcttctcccagagcagttattaactggagaaagggctcagaggttctgcgtcag
aacaaaaggatcatcttactggaggatggcagtctcaggctctataacatcaccaaatca
gatgctggggtgtacacttgtacagcaacaaatcagttcggagttgccagaaattcaggg
aacctgattgtgaaagaaaggactgtaattactattccgccttctaatatggatgtaact
gttggagaaagcatagtccttccatgccaggtgtctcatgacccctccgttaatgtggtg
ttcacatggtcgttcaatggccatacaattgattttagtagaggaatgcatcattttgaa
agaattggaagagaatctgttggggatttgatgataagaaatattcagctacatcattct
gggaaatatgtgtgcatggtacaaacaactctagacagtcaatctgcaacagcagaaata
attgtaagaggccccccaggtccaccagaagatgttaaagttgaacatgtttctagcact
actgctgtgttatcctggaagtctggaatagataataatagcccagtccagatctacagt
attcagatgaggactcctttctcagttggatggcaggcagttgcaacagttcctgaagtc
attaatggtaggactcacaaggcaacagtggttgacttaagcccttgggttgagtatgag
tttcgtgtggttgccagcaatagtgttggaactggggagccaagcagaccatcagctcta
ctgaaaactaaagcagcagttcctgtcatggcaccaacaaacatcagtggaggaggaggg
agccgttctgagctggtcatcacatgggagccagttccagaagaactacaaaatggggaa
ggttttggatacactgttatgtttcgtcctcttggcgcaacaacctggataaaagcagta
gtggcttcagcagaagcaagcaaatacgtttataggaatgaaagtattacacctctctgt
cctttcgaagtgaaagttggtgtctacaacaatgaaggagaagggacgctgagctccata
tccattgtctactcaggagaagaggagccgcagatagcaccagcggggacttcagccctg
agcatttcggcggcagaggtggaagtctcctggcagcccatcgcatggaaccggcacacg
ggcagggtgctgggctacgaggttttatattggactgatgatcccaaggaaagcacagct
ggtaaagtcagagtcaatgggaatgtgacagccagaaatatcacaggattaaaagctaac
acagtgtattttgcaacagttcgagcttacaacactgcggggacagggccctctagtact
ccagtaaatgtcaccactaaaaaatcaccaccaagtcaaccccctgtaaacattgcctgg
aagctgacaaattccaaaatctgcttgaactgggaacatgtgaaaacaatggagaatgaa
tcagaggtgttgggctacaaaatcttatatagacaaaacagacatagcaaaacccatata
ctggagacaagcaacacttcagctgaacttctggtaccatttgaagaagattatctcata
gaaataagaacagttagtgacggtggagatggcagcagcagtgaggaaatcaggattcca
aaaatatcaagaaacattgctatctgtagcaaagttcgagcacctaagagctgttccagc
atctctgccagctggctccggcatacggacgttgctttacggtgccataaagcaaatgta
actgctgtttatcatgactgttctgaggcattcccaaactga
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