Caloenas nicobarica (Nicobar pigeon): 135993054
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Entry
135993054 CDS
T11056
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
135993054 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cnic03036
]
135993054 (MBD4)
03400 DNA repair and recombination proteins [BR:
cnic03400
]
135993054 (MBD4)
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
135993054 (MBD4)
DNA repair and recombination proteins [BR:
cnic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
135993054 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
135993054
NCBI-ProteinID:
XP_065498714
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All DBs
Position
11:complement(22730207..22734883)
Genome browser
AA seq
539 aa
AA seq
DB search
MAERGPEPGPARAAPSRSGLPGGSPDGAAPERPGGGGPAERGLVGTPAAGGPGGWRTVTR
RRRSGRTAGRTDVYFVSPEGKKLKSKKALVEYLQKTGETTLKAEDFGFTGPHQRNTRSRA
KRCSTKAAGTILENDDCHGQVRGLSTQSRAEDRAGIVQTGNEHLEDVTSALESEDLVTKR
IKPEDCLKTTKKRAGRKSVQNTKTGRSSEKRNRDNTQPKRQRRVCNKQERECIQNKKFCG
RTDPRVADNRGVGDQNTDPAGAGKTLVRVSRARSDTRLRSVMAREQRELESLAEQECVET
GSDDASSAESEEKTNGLKIGKETDGGSPGTQDIKSDTGMDADVWQPCDEKSFTTVKMPSE
ESIPRTQVDRRKTSPYFSSKYSKEAPSPPRRKALRKWTPPRSPFNLVQETLFHDPWKLLI
ATIFLNKTSGKMAIPVLWEFFKKYPSPEITRAADWKEMSELLKPLGLYALRAKTIIKFSD
EYLSKRWRYPIELHGIGKYGNDSYRIFCINEWKEVQPQDHKLNVYHTWLRENQESLSLG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggggtcccgagccggggcctgcccgagcggctccttcccgcagcggcctc
ccgggcggcagcccagacggggcggcgccggagcgtccgggcggcgggggcccggcggag
aggggcctagtggggacccccgcggcgggcggccccggcggctggcggacggtgaccagg
cggcggcggtcgggccgcaccgcgggcagaacggacgtgtatttcgtcagccctgaagga
aagaagctgaaatcaaaaaaggcgcttgtggagtatcttcagaaaactggggagacaaca
ctaaaagcagaagattttgggtttacaggccctcatcagaggaacacccgctccagggca
aaaaggtgcagcacaaaagctgcggggactattttggagaatgatgattgtcatggtcaa
gtgcgaggcctcagtacacaaagcagggcagaggacagagctggaatcgttcagactgga
aacgaacacctggaagatgtcacctctgctctggaaagcgaagatttggtcacaaaacgc
ataaaaccagaggactgtttgaaaaccacaaaaaagagggcaggtaggaaaagcgttcag
aatacaaaaactggaaggagctcagaaaagaggaatcgagataatacccaacccaaaagg
cagagaagagtgtgtaacaaacaggaaagagagtgcattcaaaacaagaagttctgtgga
aggacagacccgcgtgtcgctgacaatcggggtgtcggtgatcagaacacagaccccgcg
ggtgcaggaaaaacgctggtaagggtttccagggcccggtcggacacacggctgagatca
gtgatggctcgtgagcaaagggaattggagagcctggcagagcaggaatgtgtggagact
ggttctgatgacgcatcttctgcagagtctgaggagaaaaccaatggactgaaaataggg
aaagagacagatggagggagtccaggtacccaggacattaaatctgacactggaatggat
gctgacgtctggcaaccctgtgacgagaaaagcttcaccacagttaaaatgccatcagaa
gagtctatcccacgaacacaagtggataggaggaaaacgagtccatatttttcaagtaaa
tacagtaaagaagcccccagcccacctaggaggaaagccttgagaaaatggactcctcca
cgctctccttttaatctggtccaggaaacacttttccacgatccatggaaacttctcatt
gcaactatatttctcaataaaacctcaggtaaaatggcaattcctgtgctctgggagttc
ttcaaaaaatatccttctcctgaaataacccgagctgcggactggaaggaaatgtcagag
ctgctcaaaccgctcggcctctacgcgctcagagcaaaaaccatcatcaagttctcagac
gagtacctgagtaagcgctggcgctaccccatcgagctgcacggcatcggcaagtacggg
aacgactcctaccgcatcttctgcatcaacgagtggaaggaggtgcagccgcaggaccac
aagttaaacgtgtatcacacgtggctgcgggagaaccaggagagcctgagcctcggctga
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