Caloenas nicobarica (Nicobar pigeon): 135993058
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Entry
135993058 CDS
T11056
Symbol
CCDC174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135993058 (CCDC174)
03041 Spliceosome [BR:
cnic03041
]
135993058 (CCDC174)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
135993058 (CCDC174)
Spliceosome [BR:
cnic03041
]
Complex C
Other components
EJC/TREX
135993058 (CCDC174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
135993058
NCBI-ProteinID:
XP_065498717
LinkDB
All DBs
Position
11:complement(18538587..18550864)
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AA seq
669 aa
AA seq
DB search
MDRRKKLLDVAASSLVDLKAELFRKQEEFKKEKLLKDAGIFAKPKTSNKKPSIWNKQNTG
VANRAEKDVEQKTEEEDMLDKSRKKLEEKAKLYEKMTKGDFPDEETEDLYLVDFTQKIID
KQHEVQELYQSEAARKTLEKETDDEETQPEMEIPPPKDPDEEWVDYVDFLGRSRRCMKKD
LPSLLKMDQELQGKRQSPDGTTLLSEDMRRELQRQQWEKEEEEALRKPIGPIHYEDIREN
EARQLGVGYFAFSRDKELRNKQRATLDMLREQTLDQRTKREQLKEKRKAALDARLSKLRA
RKIKKLREAGLEEEAEKLENAELKGVTEEPEAPRVTAASRKVEVVIQERRDTKPGVPYVR
EWDKGKELMFGQWSKKQEELRDERDPEFAPPSDYFLGQKKNDNYRSRNSNSPENSSEKLE
TETAQNQQMPSAQVNGSSTEDVPPSVRAYNSNVQNEPASTGARDSDTQAPSSEEDDSSDD
DDTMPSAQAYGYGAHGVLPSMQAYGYGARGAPSSVQAYGYGSHEMPFPMQAYGYSAQGVM
PPMHAYGYSTHDMAFPMQGYGYGTQDVPPAMQACGCSAQDVPPGMEGCNCGAQDAPPGMQ
ACSCSTQDVPPSLQACGCSAQDVPPGMQACGCSTQDAAPSAQTDSSDAQNQEPLYQSLDD
MLSYYRQVT
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcaggaagaagctgttggatgtggccgcctcctcgttggtagatctcaaagca
gaactcttccgaaagcaagaagaattcaagaaagaaaagctgttgaaagatgctggcatc
tttgcaaagcccaaaacttctaataagaaaccaagcatctggaacaaacaaaacacagga
gttgcgaatcgagctgagaaagatgttgagcagaagacagaagaggaggatatgttagat
aaatcaagaaagaagctggaagagaaagcaaagctgtatgagaaaatgacaaaaggcgac
ttcccagatgaagaaaccgaggatttgtatctagtggatttcactcagaagatcatagac
aaacagcacgaagtacaggagctgtatcagagtgaagctgctagaaagactttagaaaaa
gagacagatgatgaggaaactcaacctgaaatggaaataccaccgcccaaggacccagat
gaagaatgggttgattatgttgatttcttgggccgatctagacgctgtatgaagaaggat
ttgccaagtctgcttaaaatggatcaggaacttcaagggaaaaggcaaagtcctgatggg
actactctgttatctgaagacatgagaagagaacttcagagacagcagtgggaaaaagaa
gaagaagaagccctcagaaaacccataggacccatacattatgaggacattcgagaaaat
gaggccaggcagcttggtgttggttactttgccttttctcgtgacaaagaacttaggaat
aaacaacgggcaacactggatatgctaagagagcagacacttgatcagagaactaaacgt
gaacagttgaaagaaaaaaggaaggcagctctagatgcaaggctgtctaaacttcgagca
cggaagattaagaagttaagggaagctggattagaggaagaggcagaaaaactggagaat
gcagagctgaaaggtgttactgaggaaccagaagctccgagagttactgcagcaagtaga
aaggttgaggttgtcatccaggagagaagagatacaaagcctggcgtgccatatgtccga
gagtgggataaaggcaaagaactgatgtttggacaatggtcaaagaaacaggaagaactc
agagatgaacgagatccagaatttgcgccaccttctgattactttctgggacaaaagaaa
aatgataattacagaagtcggaattcaaacagtcctgaaaattcctctgaaaaactggaa
acagagacagcacaaaatcaacagatgccatcagcgcaggtcaacggcagcagcactgaa
gatgtgccgccgtcagtgcgggcttacaacagcaatgttcaaaatgagccggcatcaacc
ggggcccgtgatagtgacactcaagcgccatcatcagaggaggatgacagcagcgatgat
gacgatacgatgccatcagcacaggcttacggctatggtgctcacggtgtgctgccgtcg
atgcaggcatacggctatggcgctcgaggtgcgccgtcatcagtgcaggcttacggctat
ggcagtcacgaaatgccatttccaatgcaggcttacggctacagcgctcaaggtgtaatg
ccaccaatgcacgcttatggctacagcactcatgatatggcatttccaatgcagggttat
ggctatggcacccaagatgtgccgccagctatgcaggcatgcggctgcagcgcccaagat
gtgccaccagggatggagggttgcaactgtggcgcccaagatgcgccaccagggatgcag
gcctgcagctgcagcacccaagatgtgccgccatcactgcaggcctgcggttgcagcgct
caagatgtgccgccagggatgcaggcctgtggttgcagcactcaagatgcagcgccttca
gcgcagaccgacagcagcgacgctcaaaatcaggaaccgctttaccaaagtttagatgat
atgctgtcttactacagacaagtgacttga
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