Caloenas nicobarica (Nicobar pigeon): 135993125
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Entry
135993125 CDS
T11056
Symbol
TRAIP
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnic04121
]
135993125 (TRAIP)
Enzymes [BR:
cnic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135993125 (TRAIP)
Ubiquitin system [BR:
cnic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135993125 (TRAIP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-rbx1
zf-RING_11
zf-C3HC4_3
zf-C3HC4_4
zf-ANAPC11
zf-RING_Vps41
zf-RING_16
EXOC6_Sec15_N
Prok-RING_1
RINGv
zf_RING_Vps8
Laminin_II
zf-RING-like
zf-Nse
Crescentin
WEMBL
FANCL_C
zf-UDP
Prok-RING_4
T3SSipB
DUF5305
HIP1_clath_bdg
MAD
Motif
Other DBs
NCBI-GeneID:
135993125
NCBI-ProteinID:
XP_065498821
LinkDB
All DBs
Position
11:7874889..7895261
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AA seq
464 aa
AA seq
DB search
MPIRAHCTICSDFFDNERDVAAVPCGHTFHRACLFQWFDTAPSRTCPQCRIQVSKRHIIN
KLFFDVALEEQTAPDAETLQNELDKVKAQLSVKEKEKRKCQAIVDGLRDTLDVRNATIES
LQKVLGETEMLCSSLKKQMKFLEQQQEDNRSSKEEARRLRNKLRTMERIELLLQSQRPEV
EEMIREMGVGQAAVEQLAIYCVSLKKEYENLKEARKISGEMTEKLKKELFSVNNKLQKTA
SELEKTEEELKSTQKDLKNADKEILSLKKKIDILQDTLKVPSVTRETLSRLVFESPAPVE
LRQPKLHRPAHSDEINLDATFDVDTPEHQPCRCLCSPAKRPKLDKKPPPVVNLAKKVLKE
TMENWADDLEDDALKGLLPAFIRKSVLSKKPSSGSLLAPHKNTGTVRMGYDGLGGRTKFI
QPTNLAEIRPLAVRSKKKVSRPASAAPSASSSSSSQARLDSFLQ
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcccatccgcgcgcactgcaccatctgctccgacttcttcgacaacgagcgggacgtg
gcggccgtgccttgcgggcacaccttccaccgcgcctgtctcttccagtggtttgacaca
gcaccaagccggacttgcccacaatgcagaatccaggtcagcaaaagacacatcatcaac
aagctgttttttgatgtggcactggaggagcagacagcaccagatgcggagaccttgcag
aatgaactggacaaggtgaaggctcagctctctgtgaaagagaaagaaaagcggaaatgc
caggccattgtggatgggctgagggacactctggatgtgcgcaatgccaccatagagtcg
ctccagaaggtgctgggagagacagagatgctgtgctcctctctcaagaagcagatgaaa
ttcctggagcagcagcaggaggataacagaagttcaaaggaggaggcccgccgcctgcgg
aacaagctgagaaccatggagcggattgagctgttgcttcagagccagcgccctgaagtg
gaggagatgatcagagagatgggggtcgggcaagcagcagtggaacagctcgcaatctac
tgtgtgtcgctgaaaaaggaatatgaaaacttgaaggaggctcggaagatctctggtgag
atgacagagaagctgaagaaggagctgttttctgtcaataacaagctccagaaaactgct
tcagagttggagaagacagaggaggagttaaaaagcacccagaaggatctgaagaatgca
gacaaggagatcttgagtttgaagaagaagatagacatcctgcaggacactctgaaggtc
ccatctgtgaccagagagacactcagtcggctggtgtttgaaagccccgctcctgtggaa
ctgcggcaaccaaagctccaccgcccagcccacagtgatgagatcaatctagatgctact
tttgacgtggacacccctgaacatcagccctgcagatgtctctgcagccctgcaaaaagg
ccgaagctggataaaaaaccgcctcctgtggtaaatctggcgaagaaagttctgaaggaa
acaatggagaactgggcagatgatctggaggatgatgcccttaaaggactcctgccagca
ttcatcaggaagtctgttctctccaagaagccatcttcgggcagcttgctggctccccac
aagaacacaggcactgtgaggatggggtatgatggcttgggaggcagaacaaagttcata
cagcctacgaacctggcagaaatccgcccgttagcagtgaggagcaagaagaaggtctcc
aggcctgcatctgcagctccctccgcatcgtcctccagcagcagccaggccaggctggac
agtttcctgcagtga
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