Caloenas nicobarica (Nicobar pigeon): 135993206
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Entry
135993206 CDS
T11056
Name
(RefSeq) contactin-3-like
KO
K06761
contactin 3/4/5/6
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cnic04515
]
135993206
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cnic00537
]
135993206
Cell adhesion molecules [BR:
cnic04515
]
Immunoglobulin superfamily
Contactins
135993206
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cnic00537
]
Others
135993206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Sp38
Tissue_fac
Pur_ac_phosph_N
C2-set_3
Egh16-like
Motif
Other DBs
NCBI-GeneID:
135993206
NCBI-ProteinID:
XP_065498946
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All DBs
Position
11:11776156..11833386
Genome browser
AA seq
998 aa
AA seq
DB search
MEGTHAGAIYEELQPMGRICLGEFCGGLSPVGETPQWSVKSMSRPPPEEEAAVETCDELT
TTPFPIPLHHWEQSPHLRITYSRKQLRFGYLENSRTKMRSAVSVREGQGVVLLCGPPPRA
GDLSFAWIFNEYPSFVQEDSRRFVSQETGHLYIAKVDPSDVGNYTCVVTSTVTNSQVLGS
PTPLVLRTDGVMGEYEPKIEVQFPETLPAAKGSTVKLECFALGNPVPQINWRRTDGLPFP
SKIKLRKSNGMIEIPNFQQEDAGLYECITENSRGKNIARGRLTYYAKPHWIQTIKDTEVA
VEDTLYWDCRASGKPKPSYRWLKNGEQLSVEGRIQIENGALTISNLNLTDSGRYQCIAEN
KHGVIYSSAELRVVASAPDFSKNPMKKLIQVQIGSTVDFECKPKASPKAKCSWKKGGEQL
HENERIVLLKDGGLRIVNVTKVDAGSYTCLATNQFGTASGSTNLIVTEPTRIILAPSSMD
VTVGESVVLPCQVQHDPILDISFTWYFNGTLTDFKKDASHFEKVGGSSSGDLMIRNIQLK
HSGKYVCMVKTEVDSVASAADLIVRGSPGPPEHVKVDEITDTTAQISWQEGIDNHSPVTT
YTIQARTPFSVGWQRVTTVPDVIDGKTFTTTVVDLNPWVEYEFRVVASNKIGGGEPSLPS
EKVRTEEAVPEIPPSEVSGGGGSRSELVITWDPIPEELQNGEGFGYVVAFRPYGTTTWIQ
TVVTSPDTPRYVFRNESILPFSPYEVKVGVYNNKGEGPFSSVTTVFSAEEEPSIAPSGVS
ATSLSSSVIEVSWTAIPWKMSSGRLLGYEVRYWNNGGKEESSNRVKAAGNETSIRITGLK
SNLAYYTAVRAYNSAGAGPFSATVNATTKKTPPSQAPGNVMWNVTDSRVILSWEEVRAME
NESEVTGYKVLYRTSSQTSMNVLNTDKTTAELFLQFNEDYIIEVKATTDGGDGTSSNQIL
IPRLASMDARGSGPSVLNIFSVSSFLPTILSLTLNSVL
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggaagggacccacgctggagcaatttatgaagaactgcagcctatgggaaggatttgc
cttggagaattttgtggaggactgtctcctgtgggagagaccccacagtggagtgtgaag
agtatgagtcgtcctccccctgaggaggaagcagcagtagagacgtgtgatgaactgacc
acaaccccattccccatccccctgcatcactgggaacaaagtccccatctcagaattacc
tattcaaggaaacagttaagatttggttatcttgaaaactccaggacaaagatgagaagt
gcggtgtcggttcgagaggggcagggagtcgtgctgctctgcggcccacccccccgggcg
ggagatttgtcatttgcttggatcttcaatgaatatccatcatttgtacaagaggacagt
cgtcgatttgtgtctcaagagaccggtcacctctacatagccaaagtcgatccgtcagat
gtaggaaattacacctgtgttgtgaccagcactgtgaccaacagccaggttcttgggtcg
ccaactcctctagtgttgcgcacggatggtgtgatgggcgaatatgaacccaaaatagaa
gtgcagtttcctgagacacttcctgcagctaaaggctccactgtgaagctggaatgcttt
gcactaggaaaccctgtgcctcagattaactggagaagaactgatggtctgccatttcca
agtaaaataaagctgaggaaatccaatggcatgattgaaatacctaatttccagcaagag
gatgcaggactatacgaatgtattactgaaaactccagaggaaaaaacattgcaagagga
cgtctcacttactatgcaaaacctcactggatccagacgataaaagatactgaagttgct
gtagaggacaccttatactgggattgcagagcaagtggaaagcccaaaccatcatatcgg
tggctgaagaatggagagcaattgtcagtagagggaaggatccaaattgaaaatggtgca
cttacaatatcaaatctaaatctgacagattctggcagataccagtgcatagctgaaaat
aaacatggtgtcatctattcgagtgcagagctcagggttgtagcatctgctccagatttt
tccaagaacccaatgaagaaactgatccaggttcaaataggcagcacagttgactttgaa
tgtaaacccaaagcttctcctaaggccaaatgctcctggaagaagggaggtgagcagcta
cacgaaaatgaaagaatcgtgttattaaaggatggaggattaagaatagtcaatgtgacc
aaagttgatgctggaagctacacgtgcctggcaacaaaccagtttggaacagccagtggc
tccacaaacttaatagttacagagccaaccaggattattttggcaccttccagcatggat
gtcactgttggagaaagtgttgtcttgccttgccaggttcagcatgatcctatactggac
atcagcttcacctggtatttcaatggaacactcactgatttcaagaaggatgcttctcat
tttgagaaggttggagggagttcatcaggagatttaatgattagaaacattcagctgaaa
catagtggaaaatacgtgtgtatggtgaagacagaagtggacagcgtagcatctgcagca
gaccttattgtacgaggctcacctgggccccccgaacatgtgaaagtggatgaaataact
gataccacagctcagatctcctggcaagaaggcatagataatcatagcccagtgaccact
tacaccatacaagcaaggacacccttttcagttggctggcagcgagttacaacagttcca
gatgtgatcgatggaaaaacattcacaaccacagtagtggatttaaatccttgggttgaa
tatgaatttcgtgtagttgccagtaacaaaataggaggtggagaacctagtttaccctca
gaaaaagtaagaactgaagaggcagttcccgaaattcccccatctgaagtcagtggggga
ggaggcagcaggtctgaactggtcataacgtgggatcccattcctgaagaattacaaaac
ggagaaggatttggctatgttgttgctttccgcccctatggcaccacaacatggatacag
acggtggtcacctctcctgacacaccaagatacgtctttaggaatgaaagcatcttgccc
ttttcaccatacgaagtcaaagttggtgtctataacaataaaggagaagggccgttcagt
tcagtaaccacagttttttcagctgaagaagagcccagcatagcaccctccggtgtctct
gcaacaagtctctcgtcctcagtcatcgaggtctcctggacggccattccctggaagatg
agtagtggaaggttactgggctacgaggttaggtactggaataatggtggaaaagaagaa
tcttcaaacagagtgaaagctgcagggaatgagacatcaataagaataacaggtttgaag
agcaacttggcatactacacagctgtccgtgcttacaacagcgctggggcaggtcccttc
agtgccacagtaaatgctaccacaaaaaagacaccacccagtcaagcgccaggaaatgtc
atgtggaatgtcaccgactccagagtaatcctcagctgggaggaagtaagagctatggag
aatgagtctgaggtgaccgggtataaggttttgtacaggaccagcagtcagaccagcatg
aacgtgctgaacacggacaagacaaccgctgaacttttcctccagtttaatgaagattac
atcatagaagtaaaagcaacaaccgatggtggagatggcactagcagcaatcagatcctg
attcccagactagccagtatggatgcaagaggttctggtccctcagtcttgaatatcttc
agtgtatccagcttcttaccaacaatattgtccttgactcttaattcagtgttgtga
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