Caloenas nicobarica (Nicobar pigeon): 135993394
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Entry
135993394 CDS
T11056
Symbol
MED12
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 12 isoform X1
KO
K15162
mediator of RNA polymerase II transcription subunit 12
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnic03021
]
135993394 (MED12)
Transcription machinery [BR:
cnic03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
135993394 (MED12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med12-LCEWAV
Med12-PQL
Med12
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
135993394
NCBI-ProteinID:
XP_065499297
LinkDB
All DBs
Position
12:complement(13706008..13742244)
Genome browser
AA seq
2166 aa
AA seq
DB search
MAAFGVLSYEHRPLKRPRLGPPDVYPQDPKQKEDELTALNVKQGFNNQPAVSGDEHGSAK
NVNFNPAKISSNFSSIIAEKLRCNTLPDTGRRKPQVNQKDNFWLVTARSQSAINNWFTDL
AGTKPLTHLAKKVPIFSKKEEVFGYLAKYTVPVMRAAWLIKMTCAYYAAITETKVKKRHV
IDPFIEWTQIITKYLSEQLQKIAEFYRQLPGQGCGSPSGPMPQEVEQALKQWDYNEKLAM
FMFQDGMLDRHEFLTWVLECFEKIRSGEDEFLKMLLPLLLRYSGEFVQSAYLSRRLAYFC
TRRLAMQLDGAGGHPPHILSAQTGNPLPSTPTPQPAAGNPPPSPFSDLLLCPQHRPVVYG
LSCILQSIILCCPSALVWHYSLTDSRIKTGSPLDHLPIAPSNLPMPGGNSAFTQQVRAKL
REIEQQIKERGQAVEVRWSFDKCQETTAGFTIGRVLHTLEVLDSHSFERSDFSNSLDSLY
NRIFGLGPTKDSHEISPDDDAVVALLCEWAVSYKRSGRHRAMVVAKLLEKRQAEIEAERC
GDSEVVDEKGSISSGSLSAASAPVFQDVLMQFLDTQAPMLTDPGKENEKVEFFNLVLLFC
ELIRHDVFSHNIYMCTLISRGDLAMDSHGPRPPSPFDDPAEEHDRKETEGNSGIKLEETG
LSEPMDIDHNSSMIFDDMEKTDFSMFSPPMHCESKASPSPEKPDPEKEAKPLLKDKSVEG
MLASLYDQPRHIQYATHFPIPQEESCSHECNQRLVVLFGVGKQRDDARHTIKKITKDILK
VLNRKSTAETGGEEGQKRKKSKPEAFPTAEDIFAKFQHLSHFDQHQVTSQVSRNVLEQIT
SFALGMSYHLPLVQHVQFIFDLMEYSLNISGLIDFAIQLLNELSVVEAELLLKSSDLVGS
YTTSLCLCIVAVLRHYHSCLILNQDQMAQVFEGLCGVVKHGMNRSDGSSAERCILAYLYD
LYTSCSHLKSKFGELFSDFCSKVKNTIYCNVEPSDSNMLWEPEFMIDTIENPSAHNFTYT
NLGKSLNENPANRYSFVCNALMHVCVGHHDPDRVNDIAILCAELTGYCKSLSAEWLGVLK
ALCCSSNNGTCGFNDLLCNVDVSDLSFHDSLATFVAILIARQCLLLEDLIRCAAIPSLLN
AACSEQDSEPGARLTCRILLHLFKTPQLNPCQQDGNKPTVGIRSSCDRHLLAASQNRIVD
GAVFAVLKAVFVLGDAELKGSGFSHPGGVDDLMDDELGTRKAGGRVVTVETASLDIYAKY
VLRSICQQEWVGERCLKSLCEDSNDLQDPVLSSTQAQRLMQLICYPHRLLDNEEGENPQR
QRIKRILQNLDQWTMRQSSLELQLMIKQTANNEMNSLLENIAKATIEVFQQSAETCSASS
AGNGVNNISSSASATPASNKSKPILSSLERSGVWLVAPLIAKLPTSVQGHVLKAAGEELE
KGQHLGSSSRKERDRQKQKSMSLLSQQPFLSLVLTCLKGQDEQREGLLTSLYSQVQQIVT
NWREDQYQDDCKAKQLMHEALKLRLNLVGGMFDTVQRSTQQTTEWAVLLLDIISSGTVDM
QSNNELFTTVLDMLSVLINGTLAADMSSISQGSMEENKRAYMNLVKKLRKELGDRQSDSL
EKVRQLLPLPKQTRDVITCEPQGSLIDTKGNKIAGFDSIFKKEGLQVSTKQKISPWDLFE
GLKHSAPLSWGWFGTVRVDRKVSRFEEQQRLLLYHTHLKPKPRSYYLEPLPLPPEEEEPP
TPVALETEKKAAEPAKADKTSSNPATATEERKKKQSKTKKRNQSSNKTEDFVLGPSRGVS
YGVGMPTDLLHHQPGSTMSRLAYGQSPVGLYAQNQPLPAGGPRLDTSYRPVRMPLGKLVQ
SRPPYSGVLPPGMGSMMGIDPSYKPAVYRQQPPVSQGQILRQQLQAKLQGQGIMGQQPVR
QMAPTPSYGTLQPSQGYTPYVSHIGLQQHPSQSGTMVPPTYSGQPYQNSHPSSNPALVDP
VRQMQQRPSGYVHQQAPGYGHTLGNTQRFPHQSIQQAPMMSGMNHLGPQGVPSGIRPSQI
LPDQQQQQYLRQQQQQQQQMLRQQQQQQQQQQQQQQQQQQQQQQQPQPPQPQPQQQPQVS
TVPQPQAQGQPPGLGMQALPPQQPIFQRQGLQQTQQQQQTAALVRQLQQQLSNTQTQQNN
NPFGRY
NT seq
6501 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctttggcgtcctcagctacgagcaccgtccgctgaagcgcccgcgcctcggc
ccgcccgacgtttacccgcaggaccccaagcagaaggaggatgagctgaccgctctgaac
gtcaagcaaggcttcaacaaccagcccgcggtctccggggacgagcacggcagcgccaaa
aatgtcaatttcaacccagcgaagatcagttcaaattttagcagtattattgcagaaaag
ctgcgttgcaatacactgcctgacacaggaagacggaaaccccaggtgaatcagaaggat
aacttttggctggtgacagcacgttctcagagtgccataaacaactggttcacagatctg
gctggaactaagcccctcactcatctcgctaagaaggtgcccatctttagcaagaaggaa
gaagtctttggttatttggcgaaatacactgttccagtaatgagagcagcctggctcatc
aaaatgacttgtgcctattatgctgccatcacggaaaccaaggtgaaaaagcgtcatgtc
attgatcccttcattgaatggacacagatcataaccaagtacctgtcagagcagctgcag
aaaattgcggagttctacagacagctcccagggcaaggctgtggttcaccgtcgggacca
atgccccaggaggtggaacaagctttgaagcagtgggactacaatgagaaacttgctatg
ttcatgttccaggatggcatgctggaccggcatgaattcctgacgtgggtcctggagtgc
tttgagaaaatacggtcaggagaagatgaatttctgaaaatgctcctacccctgctgctg
cggtactctggagagtttgtgcagtcagcatacctgtccagacgtctggcctacttctgc
acccgcaggcttgctatgcagctggatggtgctggtgggcacccaccccacatcctgtct
gcccagacagggaatcctcttccttcaactcccacccctcagccagctgcagggaatcct
cctcccagccctttcagtgacttactgctgtgcccccagcaccggccagtggtctatggg
ctcagctgcatcctccagagtataattttgtgttgcccaagtgcccttgtgtggcattac
tccttgactgatagcaggataaagactggctctccgctggaccacctgcctatagcccca
tccaacttgcccatgccaggagggaactcagcctttacacagcaggttcgggcaaagctg
cgtgaaattgagcagcagataaaggaacgtggccaggctgtggaggttcgctggtcattt
gacaagtgccaggaaaccacagcaggtttcactattggccgtgtcttgcacactttagaa
gttctggacagccacagctttgaaagatctgacttcagcaactctttggattccttgtac
aacaggatatttggtttgggtccaaccaaagacagtcatgagatctccccagatgacgat
gcagtggtggccttgctgtgcgagtgggctgtcagctataaacgctctggacgccacagg
gctatggttgtggccaaacttctggagaagcgtcaagcagagatagaggctgagagatgt
ggagactctgaagttgtggacgagaagggttccatctcctcgggttctctctcagcagcc
agcgctcctgtctttcaggatgtcctcatgcagttccttgacactcaagctcctatgcta
actgatcctgggaaggagaatgagaaggtggagttctttaaccttgtgctgctgttctgt
gagctaatccgacatgatgtcttctctcacaacatctacatgtgcacactcatctctcgg
ggtgatcttgccatggattctcatgggcctcgcccgccctcacccttcgatgaccctgct
gaggagcatgacagaaaggagacggagggaaacagtggcatcaagctagaggaaacaggt
ctttctgagcccatggacatcgaccacaactccagcatgatcttcgatgacatggagaag
acagacttttcgatgttttctcctccaatgcattgtgaatctaaagccagcccttcccct
gagaaaccagatcctgaaaaggaagcaaagcctctgctgaaggataagtctgtggaagga
atgctagcatccctgtatgaccagcctcggcacatccagtatgcaacacactttcctatt
cctcaggaggagtcctgcagtcatgagtgtaaccagcgcttggtagttctttttggggtt
ggaaaacaacgggatgatgctcggcatacgatcaagaaaataaccaaagacattctaaaa
gtcttaaacagaaagagcactgcagagacaggtggagaggaaggccaaaagaggaaaaag
agcaagccagaagcattcccaacagcagaagatatctttgcaaagttccagcacctttct
cactttgatcagcaccaagtcacatctcaggtatctcgcaatgtcttggaacagatcacc
agctttgccttgggaatgtcgtaccacctgcctctggtacagcacgtgcagttcatattt
gacttgatggagtattcactcaatatcagtggtcttattgactttgccatccagttgctg
aatgaactgagcgtggtggaggcagaactactgttgaaatcctccgaccttgttggcagc
tacaccaccagcttgtgcctgtgcattgtggctgtgctgcggcactatcactcctgcctt
atattgaaccaggaccagatggctcaggtcttcgaaggtttgtgtggggtagtgaaacat
ggcatgaaccgctcagatggctcctcagcagagcgctgtatcctggcctatctctacgac
ctgtatacctcctgcagtcacctcaaaagtaaatttggggagctcttcagtgacttctgc
tccaaggtgaagaacacaatctactgcaatgttgagccatctgactccaacatgctgtgg
gaaccagagttcatgattgacactattgaaaatccgtctgcacataactttacgtacacc
aacctgggcaagagccttaatgaaaacccagctaaccgctacagttttgtctgtaatgca
cttatgcacgtgtgtgtgggacaccatgatcccgacagggtgaacgacattgctatcctg
tgtgctgagctaactggctactgcaagtctctaagcgccgagtggctgggtgtgctcaaa
gctttgtgctgttcctccaataatgggacctgtggcttcaatgatcttctctgcaatgtt
gatgtcagtgacttatctttccatgattccttggccacctttgttgctattctcattgcc
cggcagtgcttgctgctggaggacctgattcgctgtgctgccatcccctcgctcctcaat
gctgcctgcagtgaacaggactcggaaccaggagcacgtctgacctgccggattttactt
catctgtttaagactccgcagctgaacccatgccagcaagatggcaacaaacccacggtg
ggaatccgctcttcctgtgaccgtcacttactggcagcttcccagaatcgaattgtggat
ggagccgtctttgcagtgctgaaggctgtgtttgtcctgggagatgcagaactgaaaggc
tctggcttttcccaccctggaggtgttgatgacctcatggatgatgagctgggcaccagg
aaggccggcggtcgggtagtaactgtagaaacagctagcttggatatttatgccaagtat
gtactaaggagtatatgtcaacaggagtgggtaggtgagcggtgtctgaagtccctctgt
gaagacagcaatgacttgcaggaccctgtcctgagcagcacacaggcccagaggctgatg
cagctgatttgttatccacataggcttctggacaacgaagaaggagaaaatcctcagcgg
cagaggattaaacgcatcttacagaatctggaccagtggaccatgaggcagtcctcactg
gagctgcagctcatgattaagcaaacggcaaataacgagatgaactccttgttagaaaat
atagccaaagccaccattgaggtattccagcagtcagcagagacctgctctgctagctct
gctggcaacggagtcaacaacatcagtagctcagcaagtgctacacctgccagcaacaaa
tccaaacccatcctcagctccctggagagatcaggagtgtggctggtggcccctctgatt
gccaagcttccaacatcagtgcagggccatgtgctgaaagctgctggagaagaactggag
aaaggacaacatctggggtcatcatcccgcaaagagcgggatcgccagaagcagaagagc
atgtctctgctgagccagcagccatttctgtcactggtgttaacatgcttgaaaggacag
gatgagcagcgggaaggcctcctcacctctctgtacagtcaggtccagcagattgttaca
aattggcgggaagatcagtaccaagatgactgcaaagccaagcagctgatgcatgaagcc
ctgaaactacgactgaatttggtggggggaatgtttgacacagttcaacgcagtacacag
cagacgactgaatgggctgtgcttctcctggacatcatcagcagtggcaccgtggacatg
cagtcaaacaatgagctcttcaccaccgtgttggacatgctgagtgttctcatcaacggc
accctggctgctgatatgtccagcatttctcagggcagcatggaggagaacaagcgggca
tacatgaatcttgtcaagaaactcaggaaagagctgggggaccggcaatctgacagccta
gagaaggtgcgacagctactgccgcttcccaagcagacccgagatgtcatcacctgtgaa
cctcagggatccctcattgacaccaaaggcaataaaatagctggatttgactccatcttc
aagaaggagggtttgcaagtttctacaaagcagaagatttccccttgggatctgtttgag
ggcttaaagcactcagcccccctctcctggggatggtttgggacagtccgggtggatcgc
aaggtgtctagatttgaggagcagcagaggcttcttctgtaccacacacacttgaaaccc
aagccccgcagttactacctggagccgttgccactgccccctgaagaggaagagcctcct
acacctgtggctttagagacagagaagaaagctgcagaaccagccaaggctgataaaaca
agctccaatcctgccaccgctactgaagaacgcaagaagaaacagagcaaaaccaagaaa
cgcaaccaatcttccaacaaaactgaggattttgtgttgggccctagccgaggggtttca
tatggagttggtatgcctacagatctcttgcatcaccagccgggaagcactatgtcaagg
ctggcatatgggcagtcgccagtgggtctctatgcccagaaccagcctcttccagcaggt
ggccctcgcctggatacatcctacagacctgtacgcatgccactggggaaactcgttcag
agtcgtcctccctacagcggtgtgctgcctcctggaatggggagcatgatgggcatcgac
ccgtcctacaagccagcagtgtacagacagcagcctcccgtctcccagggacagatactg
aggcagcagcttcaagcaaaactgcagggccaaggcataatgggacagcagcctgtgcgc
cagatggctcccaccccatcctatggaacactgcagccctcccagggttataccccttac
gtctcccacataggccttcagcagcatccctcccagtcaggcacgatggtacctcctacc
tattctggccaaccctaccagaattcccaccccagctctaatcctgccctggtggatcct
gttagacagatgcagcagagaccaagcggctacgtacaccagcaggcccccggctacggg
cacaccttgggcaacacacagaggtttccacaccagtcaatacagcaagcccccatgatg
agtgggatgaaccatttgggtcctcaaggagtcccctcaggaattcgacccagccagata
ctgcctgaccagcagcagcagcagtacctgaggcagcagcagcaacagcagcagcagatg
ctgaggcagcagcagcagcagcaacaacagcaacagcagcagcagcagcaacaacagcaa
caacagcagcagcagccacagccaccgcagccgcagccccagcagcagccccaggtttcc
acagtgcctcagccacaggcgcagggccagcccccggggctggggatgcaggctcttccc
ccccagcagcccattttccagcgccagggtcttcagcagacacagcagcagcagcaaaca
gctgctctggttcgacagcttcaacagcagctttccaatacacagacacagcagaacaac
aacccctttggacgctactga
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integrated database retrieval system
