Caloenas nicobarica (Nicobar pigeon): 135993459
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Entry
135993459 CDS
T11056
Symbol
RLIM
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM isoform X1
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnic04121
]
135993459 (RLIM)
Enzymes [BR:
cnic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135993459 (RLIM)
Ubiquitin system [BR:
cnic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135993459 (RLIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING-like
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
135993459
NCBI-ProteinID:
XP_065499420
LinkDB
All DBs
Position
12:complement(3660619..3679230)
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AA seq
595 aa
AA seq
DB search
MESSDSSDKGNIDQSEAQRQSQLDRLDREEAFYQFVNNLSEEEYRLMRDNNLLGTPGEIT
EEELLRRLHQVKEGPPQQNSDENRGAESAEDVSNGDSIIDWLNSVRQTGNTTRSGQRGNQ
SWRAVSRTNPNSGDFRFSLEINVNRNNGNTNPETENEPSVEPSGGEDLENSQSDSEIPRS
ESPSVRQPGSERSTSEELTTEEASPPRGQRRARSRSPEQRRTRARTDRSRSPINPVSETP
RRSHHNTSSQTLDHSSVNEAEGSSRTRQHVTLRQHTVGTEVPSENAVLFSAPETRPVPQA
AGSSETNGTSETATPGQRPPTIVLDLQVRRVRPGEYRQRDSIANRTRSRSQTPNNTVTYE
SERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELS
YFMYSDSDADPSGPTPNQNMDASEPQNGGGGTSSNESTDASSGEVYEGGNDSGSTSGARR
EGRNTRGSVTFEESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQIDNLAMRNFGESDALKT
CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaaagctcagattctagtgataaaggaaatattgatcaatcagaagcacaacgtcag
agtcaactagatcggttagatcgagaggaagctttctatcagtttgtaaacaacctgagt
gaagaggaatacaggcttatgagagataacaatttgctaggaacaccaggtgaaattact
gaagaagagttgctgagaaggctacaccaagttaaagaaggtccgccacagcaaaacagt
gatgagaatagaggtgcagagtccgcagaagatgtttcaaatggagattctataatagac
tggcttaattcagtccgacagactggaaatacaacacgaagcgggcaacgaggaaaccag
tcttggagagcggtgagcaggactaacccaaatagtggtgacttcagattcagtttggaa
ataaatgtcaaccgtaataatgggaacacaaatccagaaactgagaatgagccatctgta
gagccttccggtggggaggatttggaaaacagccaaagtgactctgaaattccaaggtct
gaatcaccatctgtaaggcagcctggatcagaaaggagcacttcagaggagctgacaact
gaggaagcttcccctcctagagggcagaggagagcgagaagcaggagtccagaacagcgg
agaacacgggctagaactgatagaagtaggtcacctattaatccagtgagtgagactcct
cgcaggtctcatcacaatacatcatctcaaacgcttgaccactcctcagtgaatgaagct
gagggaagctctagaactaggcagcacgtgacattaaggcagcacacagtgggaactgag
gtgccaagtgaaaacgcagttctgttttcagcccctgaaacaagacctgttcctcaagcg
gcaggttcttcagaaaccaatggcaccagtgagaccgcaacccctgggcagaggcctcct
accatagtacttgatcttcaggtgagaagagttcggccaggagaatatcggcaaagagac
agcatagccaacagaacacggtccaggtcccagacacccaacaacaccgtcacatatgaa
agtgaacggggagggtttaggcgcacattttcacgttcagaacgggctggagtgagaact
tacgtcagtacgattaggattccgatccgtaggatcttaaacacaggcttgagcgagact
acatcagttgctattcagactatgctcaggcagataatgacaggctttggagagctgagt
tactttatgtatagcgatagtgatgcagatccgagtggcccaactccaaatcagaacatg
gatgcttctgagccccagaatggaggtggtggtacttcaagcaatgaaagtacagatgct
agctcaggggaggtgtacgaaggtggtaatgacagtggttcaacatctggtgccagacgg
gaaggtcggaatacgaggggatcagtcacatttgaagaaagtggttctctgccattcctt
agcctagcacaatttttcctactaaacgaagatgacgatgaccaaccaagaggactcacc
aaagaacaaattgacaacctagcgatgaggaattttggtgagagcgatgctctgaaaacc
tgtagtgtgtgtatcacagagtacacagaaggcaacaagctccgtaaattgccttgttca
catgagtatcatgtccactgcattgatcgctggttatcagaaaattctacttgtcccatt
tgtcgcagagcagtcttagcttctggtaacagagagagtgttgtctaa
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