Caloenas nicobarica (Nicobar pigeon): 135993460
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Entry
135993460 CDS
T11056
Symbol
GPR50
Name
(RefSeq) LOW QUALITY PROTEIN: melatonin-related receptor
KO
K04285
melatonin receptor type 1A
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135993460 (GPR50)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cnic04030
]
135993460 (GPR50)
G protein-coupled receptors [BR:
cnic04030
]
Rhodopsin family
Others
Melatonin
135993460 (GPR50)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srsx
Motif
Other DBs
NCBI-GeneID:
135993460
NCBI-ProteinID:
XP_065499424
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Position
12:12031281..12072457
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AA seq
459 aa
AA seq
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MQAALGGLGGFCRGRTPHTGCSGGPGAPRPGAPRRRRAVAPSDRQRRGCPAPGSXPPAPP
RAGRWHRRGGGGVRPPGRVPGRAPPCGAAVLPGGLPSGREEEEGPRRWRAEARMERLGSN
GSCPGCRRDGGPSARAATALAAVLIFTIVVDVLGNALVILSVLRNKKLRNAGNIFVVSLS
VADLVVAVYPYPLILSAIFHNGWTMGNVHCQISGFLMGLSVIGSIFNITAIAINRYCYIC
HSLRYDKLFNLKNTWCYLCVTWILTVVAIVPNFFVGSLQYDPRIYSCTFAQTVSTSYTIT
VVVVHFIVPLSIVTFCYLRIWILVLQVKHRVRQDCKQKLRAADIRNFLTMFVVFVLFAVC
WGPLNFIGLAVSINPSKVQPHIPEWLFVLSYFMAYFNSCLNAVIYGLLNQNFRKEYKRIL
LTLRTPRMLFIDVSKGGTEGMKSKQSPAVTNNNQAEIHL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcggctctcggcgggctgggcggcttctgccgggggcgaaccccgcacacgggc
tgcagcggggggcccggtgctccccggcccggtgctccccgccgccgccgcgcggtggcg
ccatcggaccggcagcgccgcggctgccccgcaccgggcagcnncccccccgccccgccc
cgggcagggcggtggcaccggcggggagggggcggcgtgcgccccccgggacgggtaccg
ggacgcgctcctccctgcggcgcggccgtgctgcccggggggctgccgtcggggcgggag
gaggaggaggggccccggcggtggcgggcagaggcgcgcatggagcggctggggagcaac
gggagctgcccgggctgccggcgggacgggggtccgtcggcgcgggccgccaccgccctg
gcggccgtactcatcttcaccatcgtggtggacgtgctgggcaacgcgctggtcatcctc
tcggtgctgaggaacaagaagctccgcaacgccgggaacatctttgttgtgagtttgtct
gtcgcagacctcgtggttgcggtttacccataccctctgatcttgagtgccattttccat
aatggatggaccatgggaaatgttcactgccagataagtgggttcctgatgggcttaagt
gtcatcgggtccattttcaacatcacggcaatcgcaatcaaccgctactgctacatctgc
cacagccttcggtacgataagctcttcaacctgaagaacacctggtgctatctctgcgtg
acctggatactcacagtggtggcaattgtgccaaacttctttgttggctccttgcagtat
gacccccggatttactcctgcacctttgcccagacggtgagtacatcgtacaccatcaca
gtggtggtggttcacttcatcgtcccactgtccatagtgacgttttgttacctacggatc
tggattttggtgcttcaagtcaaacaccgggtaagacaagactgcaagcagaagctcaga
gcagccgacatccggaatttcttgactatgtttgtggtttttgtcctttttgctgtgtgc
tggggaccgttaaactttattggccttgctgtttcaattaatccttcaaaagtgcaacca
cacattccagaatggctttttgtcctgagctattttatggcctattttaacagctgcctc
aatgctgtgatctatgggcttcttaaccagaatttccggaaggaatacaaaaggatcctg
ctgacgctccggactcccaggatgctcttcatcgatgtgtccaagggtggaacagaaggg
atgaaaagcaagcagtctccagccgtaacaaacaacaaccaagctgaaatacacttatga
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