Caloenas nicobarica (Nicobar pigeon): 135993504
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Entry
135993504 CDS
T11056
Symbol
LAMP2
Name
(RefSeq) lysosome-associated membrane glycoprotein 2
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03272
Virion - Hepatitis viruses
cnic03273
Virion - Lassa virus and SFTS virus
cnic04140
Autophagy - animal
cnic04142
Lysosome
cnic04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
135993504 (LAMP2)
03272 Virion - Hepatitis viruses
135993504 (LAMP2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135993504 (LAMP2)
04142 Lysosome
135993504 (LAMP2)
04140 Autophagy - animal
135993504 (LAMP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135993504 (LAMP2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cnic04147
]
135993504 (LAMP2)
04090 CD molecules [BR:
cnic04090
]
135993504 (LAMP2)
Membrane trafficking [BR:
cnic04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
135993504 (LAMP2)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
135993504 (LAMP2)
Other autophagy associated proteins
RNautophagy/DNautophagy
135993504 (LAMP2)
Exosome [BR:
cnic04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
135993504 (LAMP2)
CD molecules [BR:
cnic04090
]
Proteins
135993504 (LAMP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
Syndecan
Motif
Other DBs
NCBI-GeneID:
135993504
NCBI-ProteinID:
XP_065499494
LinkDB
All DBs
Position
12:complement(4345089..4357643)
Genome browser
AA seq
454 aa
AA seq
DB search
MTGGEAPQASARRSALAAPPGVPDMEPLCRSPACLLLLLLGASGFFQSYAVEVDVKDASN
TTCLYAKWMMKFLIKYETNSSDYKNITLDLPSNVTHDGSVCGNDTQAALLTLQFGEGHSW
SNNFTKTNETYQGDFVTFTYNTNDTAVFPDAKRKGPITVVVKDTMLPVQLNNVYVCHNTD
FFEAENVIQIFWNVTLQAFVQNGTISKNESRCRADTPTSAPTVPPTIANTTIANATSAST
STSAPAPTSAPKPVENPETGNYSLKSGNKTCLLATVGLQLNVSKDKPVLININPKTTSAD
GTCGNTTATLRLNDGNSTLIAFTFVVKNTSASVPKFYLKEVNVTLLNHLNGSVISNADNN
NFSKWDTFLGSSYMCRKEQTLEINENLQIHTFNLWIQPFLVKENKFSTAQECSLDDDSIL
VPIVVGASLACLIAIIVVAYIIGRRKSYAGYQTL
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaccggtggcgaggcccctcaggcgtccgctcgccgctcggccctcgccgcccccccc
ggtgtcccggacatggagccgctctgccgctcccccgcctgtctgctcctcctgctgctc
ggcgcctccggtttcttccagtcctatgcagttgaagtagatgtaaaggatgcctctaat
actacgtgcctgtatgcaaaatggatgatgaaattcttgataaaatatgaaacaaacagt
agtgattataaaaacataaccttggatttgccatccaatgtgacacacgatggaagcgtc
tgtggcaatgacacacaagctgcacttctgaccttgcagtttggagaaggtcactcttgg
agcaataactttacaaaaaccaatgaaacttaccagggggatttcgtcacgtttacctac
aacactaatgatactgctgtatttcctgatgcgaaaagaaaaggaccaattactgttgtt
gtaaaggatactatgcttccagttcaactgaataacgtctacgtgtgtcataatactgac
ttttttgaagcagaaaacgtaatacagattttctggaatgttacattgcaggcttttgtt
cagaatggcacaatcagtaaaaacgagtccagatgtcgtgctgacacacctacttctgca
cctaccgttccacctactattgccaatacgactattgctaatgcaactagtgcatctacc
agcacttcagcacctgctccaacctctgcgcccaaacctgtggagaatccagaaacggga
aactattctcttaaaagtggaaataaaacttgtcttctggctactgtggggctgcagctg
aatgtttccaaagacaagcctgttctgatcaacatcaatccaaagacaactagtgcagat
ggtacatgtggcaacacaacggctactctgagactgaatgatggaaacagcactttgatt
gctttcacgtttgttgttaaaaatacaagtgcaagtgtaccaaaattttatctgaaagag
gtgaatgttacactgctcaaccatctgaatggttctgtcatttcaaatgcagataacaac
aatttcagcaagtgggatactttccttggtagttcttatatgtgccgaaaggagcaaact
cttgagattaatgaaaatcttcaaatacatacttttaatctatggattcagccattcctt
gtgaaggaaaataaattctctacagcccaggagtgttcactggatgatgacagcattctg
gtcccgattgtagttggtgcttcacttgcttgcttgattgccattatagtggttgcttac
ataattggcagaagaaaaagctatgccggatatcaaactttgtga
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