Caloenas nicobarica (Nicobar pigeon): 135993699
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Entry
135993699 CDS
T11056
Name
(RefSeq) heat shock factor protein 3-like isoform X1
KO
K09416
heat shock transcription factor 3
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135993699
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
135993699
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Vert_HS_TF
UPF0242
PEARLI-4
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
135993699
NCBI-ProteinID:
XP_065499786
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Position
12:22669385..22683984
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AA seq
551 aa
AA seq
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MREASALPGAPGAAPVPGFLAKLWALVEDPQSDDVICWSRNGENFCILDEQRFAKELLPK
YFKHNNISSFIRQLNMYGFRKVIALENGMVTAEKSSVIEFQHPFFKQGKAHLLENIKRKV
SAVRTEDLKVCTEDLHKVLSEVQEMREQQNNMDVRLANMKRENKALWKEVAVLRQKHSQQ
QKLLSKILQFILSLMRGNYIVGVKRKRSLTDAAGASPSKYSRQFVRIPVESGQAVTFPEH
GADDEDGSGTGLIIRDITDTLDNAGDGLLAVAHTSGRARETQTALDPGLPICQVSQPNEL
NYAEPIPPVHINDVNKSSERGNSAVELHAAQPTAPEDPVSVIDSILNENNPGNQSDPLLD
REEIQDFLNCIDASLEELQAMLSGKQYNFGSEGFSDTLNPELPALDMTLVEASPGMENIQ
IADLAEGTEDLGASERATAGSKDMQLIQYRANPLLSLFEELPSSEAAGKLEDPKDLLLPP
LEEKPALHPPSGSGTALPAAPAGPAEPLDALGVGDAPLLAEDGNGEYKLFPLLLLSPVAN
FIEEASEIETS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcgggaagcgtcggcgctgcccggcgccccaggcgccgccccggtgcccggcttcctg
gccaagctctgggcgctggtggaggacccgcagagcgacgacgtcatctgctggagccgg
aacggtgagaacttctgcattctggatgagcagaggtttgccaaggagcttctccccaag
tacttcaaacacaacaatatctccagcttcatacgacagcttaacatgtatggtttcagg
aaggtgattgcgctggagaacggtatggttacagccgagaaaagctccgtcattgagttc
cagcaccctttcttcaagcaagggaaggcacatttactggaaaatatcaagcgcaaggta
tctgcagtaagaactgaggatctcaaggtctgtaccgaggatttgcacaaagtgctctct
gaagtccaggagatgcgagagcagcagaacaacatggacgtcagactggccaacatgaag
agagaaaataaggccctgtggaaagaagtggcagttctaaggcagaagcacagtcaacaa
cagaagctgctgtctaagattcttcaatttatactaagtttgatgcgaggaaattatatt
gttggggtcaaaagaaaaaggtctctaacggatgctgcgggtgcttcgccttccaagtac
agtcgtcagttcgtccgcatcccggtggagagcggccaggcagtgacttttcccgagcac
ggtgcagatgatgaggatggcagtggtacaggtctcatcattcgagatatcaccgatacc
ctggataatgccggcgacggtctgcttgctgtggcacacaccagcggcagagccagagag
acacagacagctctggatcctggcttaccgatttgtcaagtatcgcagccaaatgagtta
aattatgcagaacctatcccaccagttcatataaatgatgtcaacaagtccagcgaaaga
ggaaattctgctgtggagctccatgctgcacaacctactgctccagaagaccccgtgtcc
gtgattgactccatcttgaacgagaacaaccctggaaaccaaagtgaccctttactggac
agagaagaaattcaggattttcttaattgcattgatgccagccttgaagaacttcaagca
atgttatctgggaagcagtataactttggttctgaaggtttcagcgatacacttaatcct
gagctgccagccctggatatgaccttggtggaagcttcccctggtatggaaaatattcag
attgcagacctggcagagggcaccgaagatctgggagcgagtgagagagcaacagcaggg
agcaaagatatgcagctgatccagtacagggccaaccctctgctttcgttatttgaagaa
ctaccttccagtgaagccgcagggaagctggaggatccgaaagaccttctgctgccaccc
ctggaggagaaacctgctcttcatcctccgtcgggcagcggaacggccctgccagcagct
ccggccggcccggctgagcccctggatgcgctgggagtgggggacgcaccgctcctcgcc
gaagatgggaacggggagtacaaactgttcccgctcctgctcctcagtcctgtcgccaac
ttcatagaagaggcctccgagatagaaacttcttga
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