Caloenas nicobarica (Nicobar pigeon): 135993777
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Entry
135993777 CDS
T11056
Symbol
CTNNA1
Name
(RefSeq) catenin alpha-1 isoform X1
KO
K05691
catenin alpha
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04520
Adherens junction
cnic05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
135993777 (CTNNA1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
135993777 (CTNNA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cnic04812
]
135993777 (CTNNA1)
Cytoskeleton proteins [BR:
cnic04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
135993777 (CTNNA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
GIT1_C
Motif
Other DBs
NCBI-GeneID:
135993777
NCBI-ProteinID:
XP_065499906
LinkDB
All DBs
Position
13:complement(19471964..19585158)
Genome browser
AA seq
905 aa
AA seq
DB search
MTAITAGNVNFKWDPKSLEIRTLAVERLLEPLVTQVTTLVNTSNKGPSNKKRGRSKKAHV
LAASVEQATENFLEKGDKIAKESQFLKEELVAAVEDVRKQGDLMKSASGEFADDPCSSVK
RGNMVRAARALLSAVTRLLILADMADVYKLLVQLKVVEEGILKLRNAGTEQDLGIQYKAL
KPEVDKLNIMAAKRQQELKDVGHRDQMAAARGILQKNVPILYTASQACLQHPDVAAYKAN
RDLIYKQLQQAVTGISNAAQATASDDAAQQQGGGGELAYALNNFDKQIIVDPSTFSEERF
RPSLEERLESIISGAALMADSSCTRDDRRERIVAECNAVRQALQDLLSEYMGNAGRKERS
DALNSAIDKMTKKTRDLRRQLRKAVMDHVSDSFLETNVPLLVLIEAAKNGNEKEVKEYAQ
VFREHANKLIEVANLACSISNNEEGVKLVRMSASQLEALCPQVINAALALAAKPQSKLAQ
ENMDLFKEQWEKQVRVLTDAVDDITSIDDFLAVSENHILEDVNKCVIALQEKDVDGLDRT
AGAIRGRAARVIHVVTSEMDNYEPGVYTEKVLEATKLLSNTVMPRFTEQVEAAVEALSSD
PAQPMDENEFIDASRLVYDGIRDIRKAVLMIRTPEELDDSDFETEDFDVRSRTSIQTEDD
QLIAGQSARAIMAQLPQEQKAKIAEQVASFQEEKSKLDAEVSKWDDSGNDIIVLAKQMCM
IMMEMTDFTRGKGPLKNTSDVISAAKKIAEAGSRMDKLGRTIADHCPDSACKQDLLAYLQ
RIALYCHQLNICSKVKAEVQNLGGELVVSGVDSAMSLIQAAKNLMNAVVQTVKASYVAST
KYQKSQGMASLNLPAVSWKMKAPEKKPLVKREKQDETQTKIKRASQKKHVNPVQALSEFK
AMESI
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgattactgcaggcaacgttaacttcaaatgggaccccaaaagcttggagata
aggacactggcggttgaaagactacttgagcctcttgttacacaggtaacaacactggtt
aacactagcaacaagggcccctctaataaaaagcgagggcgttctaaaaaggcccatgtt
ttggctgcttcagttgaacaagcaacagagaatttcctggagaaaggagacaaaattgca
aaagagagccagttcctgaaagaggagctggtagcggctgtggaggatgttcgcaagcaa
ggtgacttgatgaagagcgcttcgggggagtttgcagatgacccctgttcctccgtcaag
cgggggaacatggtgcgggcagcgcgcgccctcctctctgctgtcactcgcctgctgatt
ctggctgacatggcagatgtctacaagctacttgttcaactcaaagtggtggaagaaggt
atcttgaaactaagaaatgctggcacagagcaggatttgggtatccagtacaaagctctg
aaaccagaagtggataagcttaacataatggcagccaagagacaacaggaattgaaagat
gtaggtcaccgtgatcaaatggcagcagccagaggaatcctgcagaagaacgttcccatt
ctgtacacggcgtcgcaggcctgcctgcagcaccccgatgtcgccgcctacaaagccaac
agggacttgatctacaagcagcttcagcaggcggtcaccggcatctccaatgccgctcag
gcgacggcgtcggatgatgctgcccagcagcagggcggagggggagagttggcctatgct
ctgaacaacttcgataaacaaattattgtggatccatcgaccttcagtgaagagcgtttt
aggccttccctggaagagcgcctggagagcatcattagcggagcagccctgatggctgat
tcatcctgcacacgtgatgaccgacgggagcggatagttgccgagtgtaatgcggtgcga
caggccttgcaggatctactttcagaatacatggggaatgctggacgcaaagaaagaagc
gatgcactgaactctgcaattgataaaatgaccaaaaagacccgagacttgcgtagacag
ctccgcaaagctgttatggaccacgtatcagactcttttctggaaacaaatgttccgctt
ttagtcttgattgaagctgccaagaatgggaacgaaaaagaagttaaagaatatgcccag
gttttccgtgaacatgccaacaaattgattgaggttgccaacttggcctgttccatctcg
aacaacgaagaaggtgtgaagctggttcgcatgtcagccagccagctcgaagccctgtgt
ccccaggtgatcaacgcggcgctggcgctggctgccaaaccccagagcaagctggctcag
gagaacatggatctcttcaaggagcagtgggagaagcaagtccgcgtgctgacggacgcc
gtggacgacatcacatccatcgacgacttcctggctgtgtcagagaatcatattttagaa
gatgtaaacaaatgtgtcattgctctccaagaaaaagatgtcgatgggttagaccgcaca
gctggtgcaattcgcggccgtgctgctcgagtcattcacgttgtcacttccgaaatggat
aactacgaaccgggagtctacaccgagaaggtgttggaagcgacaaagttactgtccaac
acagttatgccgcggtttactgagcaagtcgaagctgctgtggaagcactgagttcagac
cctgctcagcccatggatgaaaatgaatttatcgacgcatcgcgactggtgtacgatggg
atacgagacatcaggaaagccgtactgatgatccggactcctgaagagttggatgattct
gactttgagaccgaggattttgacgtccggagcagaacaagtattcagactgaagatgat
cagctcattgctggacaaagtgcgagggctatcatggctcagctcccgcaagaacaaaaa
gcaaagattgccgagcaagtcgcgagcttccaggaagaaaagagtaaattggatgctgaa
gtatcaaaatgggatgacagcggtaacgatataattgttctggccaaacaaatgtgtatg
attatgatggaaatgacagacttcaccagaggtaaaggtccactgaaaaacacgtcagat
gtgattagcgcagccaagaagattgcggaggccgggtcgaggatggacaagctgggacgg
accattgctgaccactgccccgactcagcgtgcaagcaggacctgctcgcctacctgcag
cgcatcgcgctctattgccaccagctgaacatctgcagcaaagtgaaggctgaagttcag
aacctcggtggggagctggttgtgtctggggtggacagcgccatgtccctcatccaagca
gccaagaacctgatgaacgcggtggtgcaaaccgtcaaggcctcctacgtggcctccacc
aagtaccagaagtcgcagggcatggcgtcgctcaacctgcccgccgtctcctggaagatg
aaggctccggagaagaaacccctggtcaagagggagaaacaagacgaaacccaaacgaaa
atcaagagagcgtcccagaaaaaacacgttaacccggtgcaggcgctcagcgagttcaag
gccatggaaagtatctaa
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