Caloenas nicobarica (Nicobar pigeon): 135993780
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Entry
135993780 CDS
T11056
Symbol
SLIT3
Name
(RefSeq) slit homolog 3 protein isoform X1
KO
K06850
slit 3
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cnic00536
]
135993780 (SLIT3)
Glycosaminoglycan binding proteins [BR:
cnic00536
]
Heparan sulfate / Heparin
Axon guidance molecules
135993780 (SLIT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
EGF
Laminin_G_2
LRRNT
Laminin_G_1
LRR_9
EGF_TEN
LRRCT
LRR_14
hEGF
JAG1-like_EGF2
EGF_DL_JAG
EGF_Teneurin
LRR_EndoS
Laminin_G_3
EGF_2
Motif
Other DBs
NCBI-GeneID:
135993780
NCBI-ProteinID:
XP_065499911
LinkDB
All DBs
Position
13:16559244..17058756
Genome browser
AA seq
1520 aa
AA seq
DB search
MLSGGRSAFLCLGMVLSFWSSVSWMPVGGCPHKCTCIASNVDCHGLGLKTVPRDIPRNAE
RLDLEKNNITRITKTDFTGLKNLRVLHLEENQISVIERGAFQDLKQLERLRLNKNKLQVL
PELLFQNTQKLTRLDLSENQIKGIPRKAFRGIIDVKNLQLDNNQISCIEDGAFRALRDLE
ILTLNNNNITRIPVTSFNHMPKIRTLRLHSNVLHCDCHLAWLSDWLRQRRTIGQFTFCLA
PVNLRGFLVAEVQKKDFVCSGSQSEPPSCSASSITCPSACTCSNNVVDCRGRGLTEIPAN
LPEDIWEIRLEQNLIKIIPPGAFTQYKKLKRIDISKNQISDIAPDAFKGLKSLISLVLYG
NKITEIPQGLFDDLVSLQLLLLNANKINCLRVNTFQGLHNLKLLSLYDNKLQTISKGLFA
PLRSIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSNPRRLANKRISQIKSKKFR
CSGSEDYRSKFTGKCFMDLVCPEKCRCEGTIVDCSNQKLTRLPGHLPEYTTDLRLNDNDI
SVLEATGLFKKLPNLRKINLSNNKIKEIREGTFDGASGVQELILTENQLESVHGRMFRGL
TGLKTLMLRSNSISCINNDTFAGLSSVRLLSLYDNHISTITPGAFSTLVSLSTINLLANS
FNCNCHLAWLGKWLRKKRIVSGNPRCLKPFFLKDIPIQDVDVQDFTCDGNDESSCLLSPP
CPSQCTCVDSVVRCSNKGLRILPKGIPKDVTELYLEGNHLTAVPKGLSAFRHLTLIDLSN
NSISVLANYTFSNMTQLSTLILSYNRLRCIPVHAFNGLRSLRVLTLHGNDISSVPEGSFN
DLISLSHLALGTNPLHCDCHLRWLSEWVKAGYKEPGIARCSGPDAMGDRLLLTTPTHHFQ
CREPTDISVVSKCNPCLSNPCKNNGTCSNDPVDFYQCTCPFGFKGRDCSVPINSCIQNPC
QNGGTCHLTEANKDGFSCSCVLGYEGERCEINPDDCEDNDCENNSTCVDGINNYVCLCPP
NYTGELCDEVINHCVPDLNPCQHESKCLPLDKGIRCECLPGYSGKHCEIDDDDCVGHKCR
HGAVCVDAVNGYTCVCPQGFSGLFCETPPPMVLLQTSPCDDYECQNGAQCIVAHQEPVCR
CLAGFAGQKCEKLITVNFVGKDSYVELPSAKIRPQANISLQVATDKDNGILLYKGDNDPL
ALELYQGHVRLIYDTLNSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGTPKSLGK
LQKQSSASLNTPLYIGGIPTSTGLSSLRQGADKTPNGFHGCIHDVRINNELQDFKDLPQQ
SLGVLPGCKSCNICKHGICRSLEKTSVICECHPGWTGPLCDQEIGDPCLNHKCLHGKCVV
ANVAYTCKCTEGYTGVYCDKKNNSSNPCRILKCNHGQCKTSEHGEPYCECEPNYSGEHCD
RENLCQGEIIREVVRKQQGYTSCATASKVPRLECRGSCSSGQCCVPLRSKRRKYFFQCTD
GSTFTEELERHVECGCSKCL
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgttgtctggtggaagaagtgcgtttctgtgccttggaatggtcttgagcttttggagc
tccgtgagttggatgcctgttggaggatgcccgcataaatgtacatgtattgcttccaac
gtggattgtcatggactgggactcaaaactgtaccaagggatattcccaggaatgcagag
agacttgatctagaaaagaataatatcacaagaatcacgaagacagacttcacaggactg
aagaatctccgtgtcttacacttggaagaaaatcagattagtgtgatagaacgtggagca
tttcaggatctgaaacaacttgaacggctgcgtctgaacaagaataaattgcaagttctt
ccagagctgctttttcagaacacacagaagttaactagattagacctgagcgaaaaccag
ataaaaggaatccctagaaaggcctttcgaggaatcattgatgtgaagaacttgcaactg
gacaacaaccagatcagctgcatcgaagatggagccttccgagccctgcgcgacctggag
atccttactctcaacaataacaacatcacccgcattcctgttaccagtttcaatcacatg
ccaaagatcaggactctgcggctccactccaacgtcctgcactgcgactgccacctggcc
tggctgtcggactggctgcggcagcgacgcaccatcggccagttcaccttctgcctggcg
cccgtcaacctgcgcggcttcctcgtggcagaggtgcagaagaaggacttcgtctgctct
ggttcccagtccgagcctccgtcgtgcagtgccagttccatcacttgcccatctgcctgc
acctgcagcaacaacgtggtggattgtcgaggaaggggcttaacagaaattccagctaac
ctgccagaggacatttgggaaatacgtttggaacaaaacctcatcaaaatcattccccct
ggagcttttactcagtacaagaagcttaagagaatagacatcagcaagaatcagatttct
gacattgcacctgatgcgttcaaaggcctgaaatctctcatttcgttagtgctctatgga
aacaagatcacggagattccccagggcctttttgatgatcttgtgtctctgcagctgctg
cttctcaatgccaataagatcaactgcctgagggtaaacacgttccaaggtctgcataat
ctcaaactgctatctctttatgacaacaaactgcagaccatcagcaaggggctctttgca
cctctccgatcgatccagactctacatttagctcagaatccatttgtgtgcgactgccat
ttgaagtggctggctgattacctgcaggataatccgatagaaaccagcggcgctcgatgc
agcaatccgcgtcgccttgccaacaaacgaatcagccagatcaagagcaagaagttccgc
tgctcagggtcagaggattacagaagtaaattcaccgggaagtgtttcatggacctggtc
tgtcctgagaagtgtcgctgcgaggggacaattgtagactgctctaaccaaaaactcacc
cggttacccggtcaccttcctgaatacactactgatctgcgtttgaatgacaatgatatt
tccgttttggaagctacgggactcttcaagaaattgcccaacctcagaaaaataaatctg
agcaacaataagatcaaggagatccgagaaggcacatttgacggagcttcaggagtgcag
gaactgatcctgacagagaatcagctggaatcagtgcatggacgaatgtttagaggcctc
acagggctaaagacattgatgctgaggagcaactctatcagctgtataaacaacgacacc
tttgctggactgagctcggtgaggctgctttctctgtatgacaatcacatcagcactatc
acgcctggagctttcagcacattagtctccttgtctacgattaatttgctggccaactcc
tttaactgtaactgccacttggcctggctgggaaaatggttgaggaagaagagaattgtc
agtggaaatccacgctgcttgaaaccctttttcttaaaggatattccaatccaagatgta
gatgtccaggacttcacctgtgacggtaacgatgaaagcagctgcttgctttcccctcct
tgtccttcccagtgtacctgcgtggactcggtggttcggtgcagcaacaaagggctgcgg
atattgcccaaaggaattcccaaagacgtgaccgagctatacctggaaggaaaccatctg
actgctgtgccaaaggggctctccgcctttagacacctgacgctgattgatctgagcaac
aacagcataagtgtcttggccaattacaccttcagcaacatgactcagttatcaacactc
atcctgagttacaacagacttcggtgcatcccagtccacgcgttcaatgggctcaggtct
cttcgggtgctgacactccatggaaatgatatttccagtgttcctgaaggttctttcaac
gacctgatatccctttcccatctggctctgggtaccaaccccttgcactgcgactgccac
ctgcgctggctgtccgagtgggtgaaggcgggatacaaggagccgggcatcgcgcgctgc
agcggccccgacgccatgggggacaggctgctgctcacaacgcccacccaccacttccag
tgcagagagccgacagatatcagtgtggtgtccaagtgtaacccctgcctctccaatccg
tgtaagaacaatgggacatgcagcaatgatccagtggacttttatcaatgcacctgccct
tttggcttcaagggtcgagactgcagtgtgcccattaattcctgcattcaaaatccatgt
cagaatggagggacctgccacctcaccgaggcaaataaagatggattcagctgttcttgt
gtccttgggtatgagggggaaaggtgtgaaataaacccagatgactgcgaagataatgac
tgcgagaacaactctacgtgtgtggatgggatcaacaactatgtctgtctctgccctcct
aattacacaggtgaactgtgtgatgaggtgattaaccactgtgttcctgatctcaatcca
tgccaacatgagtccaaatgtcttccccttgacaaaggaatcagatgtgagtgcttgccg
ggttacagcggaaaacactgtgaaatagatgatgatgactgcgtgggccataagtgtcgc
catggagccgtctgcgtagatgccgtcaatggctacacctgcgtctgtcctcagggcttc
agcggacttttctgtgaaactcctccgccgatggttctgctccagaccagcccgtgtgac
gactacgagtgccagaacggggctcagtgcatcgtggcgcaccaggagcccgtctgccgc
tgcctcgccggcttcgccgggcagaagtgcgagaagctcatcacagtcaactttgtgggg
aaggattcctacgtggagctgccgtcagccaaaattcgccctcaggcaaacatctccctc
caggtagcaacagacaaggacaatggcatcttgttatacaaaggagacaacgatcctttg
gctctggagttgtaccaagggcacgtgaggctcatctacgacacgctgaattctccacct
accacagtgtacagtgtggaaacagtaaatgatgggcagtttcacagtgtggagcttgtg
atgctgaatcaaactctgaacctggtggtggacaagggaactcccaagagcctgggaaaa
ctccagaagcagtcttctgccagcctcaacacacccctctacatcggagggatcccgacc
tccactggattatcctcactgcgccagggtgcagataagacaccaaatggttttcatgga
tgcattcacgatgtccgcatcaataacgagctgcaggatttcaaggatttaccacagcag
tcactaggagtccttcctggctgcaaatcctgtaacatctgcaagcatggtatttgccgg
tccctagagaaaacaagtgtgatttgtgaatgtcacccaggctggacaggacccctgtgt
gaccaggaaattggagacccctgtcttaaccacaagtgtctgcacgggaagtgcgtggtg
gccaacgttgcttatacgtgtaagtgcacggagggctacacaggtgtgtactgcgacaag
aagaacaactcctccaatccctgcaggattctgaaatgcaaccacgggcagtgtaaaact
tccgagcacggggaaccctactgcgaatgcgaacccaactacagcggagagcactgtgac
agagagaatctctgccaaggagagatcattcgagaagtcgtccgtaagcagcagggctac
acgtcgtgtgccacggcctccaaagtcccgcgcctggaatgccgcggcagctgcagcagc
gggcagtgctgtgtcccgctgcggagcaagaggcggaaatacttcttccagtgcacggat
ggatccaccttcacagaagaactggagaggcacgtggaatgcggctgctcgaaatgctta
taa
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