Caloenas nicobarica (Nicobar pigeon): 135993787
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Entry
135993787 CDS
T11056
Symbol
CYFIP2
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04810
Regulation of actin cytoskeleton
cnic05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
135993787 (CYFIP2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135993787 (CYFIP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135993787 (CYFIP2)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
135993787 (CYFIP2)
Factors involved in mRNA localization
Other mRNA localization factors
135993787 (CYFIP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
135993787
NCBI-ProteinID:
XP_065499928
LinkDB
All DBs
Position
13:complement(5241153..5291314)
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AA seq
1253 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCTQSSISPQYNICEQMVQIRDDHIRFI
SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSAHVMEVYSWKLVHPTD
KFCNKDCPGTAEEYERATRYNYTSEEKFAFVEVIAMIKGLQVLMGRMESVFNQAIRNTIY
AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGGREPPNDPCLRGEKDPKG
GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEEFHKQSFF
FTHLLNISEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM
EYVLYPLDLYNDSAYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV
LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD
QAISRFESEDLTSIVELEWLLEINRLTHRLLCKHMTLDSFDAMFREANHNVSAPYGRITL
HVFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI
YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR
LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAVLFCLLIEQALSQEEVCD
LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAQEGDLL
TKERLCCGLSMFEVILTRIRSYLQDPIWRGPPPTNGVMHVDECVEFHRLWSAMQFVYCIP
VGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
KKMADRIRKYQILNNEIFAILNKYMKSVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcacgtcacgctggaggatgccttgtccaacgtggacttgctggaggagctg
cctctgccagaccagcagccatgcattgaaccacctccgtcctccatcatgtaccaggct
aattttgacacaaactttgaagacagaaatgcctttgtgaccggcattgccaggtacatc
gagcaggcaacggtgcactccagcatgaatgaaatgctggaagaaggccatgagtatgct
gtgatgctttacacatggaggagctgctcacgagccatcccccaggtgaaatgtaatgaa
cagccaaaccgagtggagatttatgagaagacggtggaagtcctggagccagaagtcaca
aagcttatgaagttcatgtattttcagcgcaaggccatcgagcggttctgcagcgaggtg
aagcgcctgtgccatgctgagcggaggaaagactttgtctctgaggcctatctccttacg
ctgggcaagttcattaacatgtttgctgtcctggatgagctgaagaacatgaagtgcagc
gtcaaaaacgaccactctgcctacaaaagagctgcccagttcctgcggaagatggcagac
ccacagtctatccaggagtcccaaaacctctccatgttcttggcaaaccacaaccgcatc
acacagtgtctgcaccaacaactggaggttatccctggctatgaggaattgctggctgat
attgtcaatatctgtgtggattactacgaaaacaagatgtatctcactcccagtgagaaa
cacatgctcttaaaggtgatggggtttggcctgtatctaatggatgggaatgtcagcaac
atttacaagttggatgccaagaagagaatcaaccttagcaaaatagacaagttcttcaag
cagctgcaggtggtccctttattcggcgatatgcagatagaactggccagatacattaag
accagtgctcactatgaggagaacaaatccaagtggacgtgcactcagagcagcataagt
ccccagtacaacatctgtgagcagatggtccagatccgagatgaccacatccgcttcatc
tcagagcttgctcgctacagcaacagcgaggtggtcactggctcaggactggacagccag
aaatcagatgaagagtacagggagctcttcgatctcgctttacggggactgcagctgctg
tccaagtggagcgcccatgtcatggaagtgtactcttggaagctggttcatcccacagat
aagttctgtaacaaggattgcccaggaacagcagaagagtatgaaagagccacccggtac
aactacaccagtgaagagaagtttgcctttgtggaggtaattgccatgattaaaggtctg
caagtgctgatgggccggatggagagcgtctttaaccaagccatccgcaacactatctat
gcagccctgcaggactttgcccaggtgaccctgcgagaaccactgaggcaggcggtcagg
aagaagaagaatgttctgatcagtgtccttcaggcaattcggaagacaatctgtgactgg
gagggaggtcgagagcctccaaatgatccttgcctgagaggtgagaaggatcctaaaggt
ggatttgatattaaagtcccacgacgagcagtaggaccatcaagtacacagctttacatg
gtgcggaccatgctggagtccctcatagcagacaagagtggctcaaagaagactctgagg
agcagcttggatgggccgatagtcttggccattgaggagttccacaagcagtccttcttc
ttcacccaccttctcaacatcagcgaagcgctgcagcagtgctgcgacctgtcccagctc
tggtttcgggagttcttcctggagctgaccatgggccgccgcatccagttccccatcgaa
atgtccatgccctggatcctcacggaccatattctggaaaccaaagaaccctccatgatg
gagtacgtactgtaccccttggacctctataatgacagcgcatactatgcgttgaccaag
ttcaaaaagcagttcctatacgatgaaattgaagctgaagtgaatttgtgctttgatcaa
tttgtgtacaagctggcagatcagatctttgcctattataaagcaatggctggcagtgtt
ttattggacaaacgtttccgggctgaatgtaagaattatggggtgattattccataccca
ccatccaaccgctatgaaacgctgctcaagcagaggcatgtccagctgctgggtagatca
atcgacctgaacaggctcattacccagcgtatctcagcagcgatgtacaaatcattagac
caggccattagccgctttgagagcgaggacctgacatccatagtggagctggagtggctc
ttggaaatcaatcgcctgactcacaggttgctgtgcaagcacatgacgttggacagcttc
gatgccatgttccgggaggccaaccacaacgtctctgcgccctatgggcgcatcaccctc
cacgtcttctgggagctcaactttgactttctaccaaactactgctacaatggatccacc
aacaggtttgtcaggacagcaatcccattcacgcaggaaccccagcgggataaaccagcc
aacgttcagccgtattacctgtatggatccaagcctctcaacattgcctacagtcacatc
tatagctcctaccgcaatttcgtggggccacctcatttcaagactatctgcaggcttctt
ggctatcaagggatcgcagtggtcatggaagagctgttgaagatcgtcaagagcctgcta
caaggcaccatcctgcagtatgtgaagactctgatcgaagtaatgcccaagatatgccgc
ttgccgagacatgaatatggctctccaggaatcctggagtttttccaccatcagctgaag
gacatcattgagtacgcggagctgaagaccgatgtgttccagagcctcagagaagtgggc
aatgccgttctcttctgcctccttatcgagcaggctttgtcccaggaagaagtttgtgat
ttgctgcatgctgctcccttccaaaatattttgcccagggtctacatcaaagaaggagaa
cgcttggaggtgcgcatgaagcgtctcgaagccaagtatgccccacttcacctggttccc
ttaatagagaggctgggcactccgcagcaaatagccatcgcccaggagggtgacttgctg
accaaggagcggttatgctgcgggctgtccatgttcgaggtgatcctgacgcggattagg
agctacctgcaggaccccatctggcgcgggccacccccgacgaacggggtcatgcacgtg
gacgagtgcgtggagttccaccggctctggagtgccatgcagtttgtgtactgcatcccc
gtgggcaccaacgagttcactgcagagcagtgctttggagatggtctgaactgggcgggt
tgctctatcattgttctccttggacagcaacggcgctttgacctctttgacttctgctac
cacctgctgaaggtgcagaggcaggacgggaaggatgaaatcataaaaaacgtgcccttg
aagaagatggctgacaggatcaggaagtatcagatcctgaacaacgagattttcgccatc
ctgaacaagtacatgaagtcggtggaaacagacagttccacggtggagcacgtgcgctgc
ttccagcccccaatccaccagtcactggccaccacctgctag
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