Caloenas nicobarica (Nicobar pigeon): 135993838
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Entry
135993838 CDS
T11056
Name
(RefSeq) protocadherin beta-15-like
KO
K16494
protocadherin beta
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cnic04515
]
135993838
Cell adhesion molecules [BR:
cnic04515
]
Cadherins
Protocadherins
135993838
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
135993838
NCBI-ProteinID:
XP_065500025
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Position
13:18285547..18288696
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AA seq
813 aa
AA seq
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MAIARQVLCLSAFLSLPHACSQSLRYSVAEEGESGSVVGNVAEDAGLAPAQLSARRARLA
SEDGRQHFRLERGTGRLVLAERLDREELCGQAATCTLPFELVLANPLQFFRVEVAVEDIN
DHAPVFPEEQVTIKIPETGNLGSHFPLVGAHDLDIGSNSIQAYSISPENKYFSVSFGGRS
EGEKYVELVLEKVLDREEQAEMDFSVIAMDGGSPPRSGSTQIRIIVLDVNDNAPVFTQKL
YVASLFENAPEGSVVLRVVATDLDAGPNGDISYQFSQAVGQSDSAFVIDPVSGEIKLTKP
LDFEATENHELTVQAKDGGGLSAICKVLVEVVDVNDNAPELVVSSFSSPLPENALPGTVV
ALFTVRDRDSGANGKISCALEDQLSFSLHLAYKNYYELVTVSTLDREETARYILSVVAAD
AGSPSLTTTQTFTVDISDVNDNAPVFSQTLYTMYVRENNVPTVLVGAVSAADADVGSNAK
VTYSLVPAHPTEQPPCSCISVNSENGDVFVLRPLDYEQLKQIEVLVLASDAGSPALSANI
TVRLVVVDENDNAPLVLYPSQDTSSLSSELVPMSAETGYLVTKVVAVDADSGQNSWLSYH
LLRATDPGLFVVGVQSGEVRLRRVVTERDAVKQKLVVLVRDNGQPPLSATASLIALLLSD
FSDVRLPHSSLATEDEGDSLTMYLIISLVFVSILFLASMAAFVTLKVCKRKELKGGHVLY
GAGTLQSGLADGGAAGTLPHPYCYEISLTTGSGNSEFKFLKPILPSLPPQNCTVGGATDD
EQDFPRGYITMEDRAPAQPGMLSAEQFNSLSFK
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggcgatcgcaaggcaagtgctttgtctctctgctttcctgtccctgccgcacgcttgc
tcccagtccctccgctattccgtagccgaggagggggagagcggctcggtggtaggcaac
gtggcggaggacgcggggctggccccggcgcagctctcggctcgccgcgcccgcctggcc
tcggaggacggccggcagcactttcgcttagagcgcggcaccggccgcctggtcctggcg
gagaggctggaccgggaggagctgtgcgggcaggccgctacatgcacgctgcccttcgag
ctggtgctggccaaccccctgcagttctttcgggtcgaggtggccgtggaggacatcaat
gaccatgcacccgttttcccggaggaacaagtcaccattaagattccggagacgggcaac
ttgggttcgcatttcccattggtgggagctcatgacctggatattggcagcaacagcatc
caggcttacagcatctctcccgagaataagtactttagcgtgtcctttgggggtcggagt
gagggtgagaagtacgttgaactggtcttggaaaaggtactagacagagaggagcaggca
gagatggatttcagtgtaattgccatggatggtggctctccacccaggagtgggagcacc
caaatccgcattattgttctagatgtaaatgacaatgctccagtcttcacacagaaactg
tacgttgccagtctttttgaaaatgcaccagagggctctgttgttctgcgagtggtggca
actgatttggatgcaggacctaatggggacatctcctatcagttcagccaagcagtgggc
cagagtgactctgcatttgtgattgaccctgtcagtggggagattaaactaacaaagcct
ctggacttcgaggcaacagagaatcatgagctcaccgtgcaagccaaggatggtggtggt
ctgtctgcaatctgcaaggtgctggtggaggtggtggatgtgaacgacaatgcaccggag
ctggtggtcagttccttcagcagccccctccctgagaatgcattgcctgggacagtggtc
gccctctttactgtcagggacagggattctggagccaatgggaagatttcctgtgccctt
gaggaccagctgtcattctccttgcatctggcctataagaattactatgagctggtgact
gtgagcacactggaccgggaggagactgcacggtacatcctcagtgtcgtagcagcagat
gcggggtcaccttctctcacaaccacccaaaccttcacagtggacatctcagatgtgaat
gacaatgctcctgtcttcagccaaaccttgtacaccatgtatgtgcgtgagaataatgtc
cccacagtgcttgttggagctgtgagtgctgcagatgcagatgtggggtccaatgccaag
gtgacctattccctggtaccagcccaccccacagagcagcctccctgctcctgtatctct
gtgaactctgagaatggggatgtgtttgtgttacggcctctggactatgagcagctgaag
cagattgaagtcttagtgcttgcctctgatgcaggttctcctgccctcagtgccaacatc
actgtccgccttgttgtggtggatgagaatgacaatgcgccactggtgctgtacccctca
caggacaccagctcactgtccagtgagctagtgcccatgtcggctgagactgggtacttg
gtcaccaaagtggtggccgtcgatgccgactcagggcagaattcgtggctttcgtaccac
ctgctgagggccactgaccctgggctgtttgtggtgggtgtccaaagtggggaggtgcgg
ctgaggagggttgtgacagagagagatgctgtgaagcagaagcttgttgtcctagtgcga
gacaatgggcagccaccactgtcagccacagcatcactgattgcacttctgctcagtgac
ttctcagatgtccgcctaccacacagcagcctggccacggaggatgaaggtgactcccta
acaatgtatttgataatttccttggtctttgtctcaatcctcttcctcgcctccatggca
gcctttgtcactctcaaggtgtgcaagagaaaggagctgaaaggtgggcacgtgctttat
ggtgctggcaccttgcagagtggccttgctgatggaggtgctgcagggaccctgccccac
ccctattgctatgagatcagcctcacaacaggttcaggcaacagtgagttcaagttcctg
aagcccatcctccccagccttccaccacagaattgcactgtgggtggggccactgatgat
gaacaggatttcccccgtggctatatcactatggaggacagggcaccagcccagccaggg
atgctctctgcagagcagttcaatagtctttcctttaagtag
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