Caloenas nicobarica (Nicobar pigeon): 135993918
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Entry
135993918 CDS
T11056
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
135993918 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnic03400
]
135993918 (UIMC1)
DNA repair and recombination proteins [BR:
cnic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
135993918 (UIMC1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
UIM
zf-WRNIP1_ubi
Motif
Other DBs
NCBI-GeneID:
135993918
NCBI-ProteinID:
XP_065500188
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Position
13:4047932..4087549
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AA seq
810 aa
AA seq
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MPRKKKLSEGLDSRDQDEEEEKRNAASGKKKRSFVDAFIVISDSDGEQESKEESGLQKKR
TKQQLDRTKFTAKRKIAHMTEEEQFALALKMSEQEARQVNCQEEEEEELLRKAIAESLNS
CQPSESSDATPQLSAEVLGVRGQRQPTKKEGSDIQGSLAVCPDTPPSKCSSHSQSARADG
NGQTDVARSPLVVLRRLSQEIVESSLVSSIIVSPGKGQPLTRSSEKPSSPAKSDSSNVLL
STLGEDLISLSPTFGRVTSGSWRLTPRRLFASPSSSSEATGQEPKEQPLPCTGHSPRESG
AGSSATLWKSWTTEWCGSPRRSGGGTGTKRPSQPGHEACVSTKQAEQNEVPNSTPELCVL
NAAEEKHKQEEARDTVHYYWGIPFCPKGVDPNQYTKVILCQLEVYQKSLKQAQRQLLHKK
EFGNPVVPSSSLSTNELVKGEQISRENGVADDAEDGDPDGQKESDSVTWLLPSKRREAES
PGHSMEEEKNSTSDDEPTTSYCQASQVLPAEDVREDEEPMQIAQSLSVLTPLGDKRSPDI
ATENSAEEEISVCPETQLSPLEAVEVESEEVCLGSREAPVQADGDEDTGRTVSERSPTAT
DHVSCPLCAQGFPATEIERHAMYCNGGAGEEAGRDTPVLTRRQREAKSKAANRDSSPTSL
DIDKCEKCYLCKSLVPLLQYQRHVDSCLQAARQAQGTRRLRSAKDAGRQERGLLRMLELS
ESKSAGADVETPLPGLGDQQSPPTLSSRAGGPVADTPRSLQHLPFSVSPPKPGVSFSEAT
DCVVDVEPHAALRLGSQQQTKGCRRRKRKF
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgccgaggaagaagaagctctcagagggcctggactctcgagatcaggatgaggaggaa
gagaagaggaacgcagccagtggcaagaagaagcgcagctttgtggacgcgtttattgtc
atatctgacagcgatggagagcaggagtcaaaggaagagagtggattgcaaaagaagaga
acaaaacagcagctggatagaacgaagttcactgctaaaaggaaaatagcacacatgact
gaagaggaacagtttgcactggccctgaaaatgagtgagcaagaagccagacaagtgaac
tgtcaggaagaggaagaggaggagctcttgaggaaggccattgctgagagccttaatagc
tgtcagccctcggagtcctctgatgcaacccctcagttgtctgcagaagtgctgggcgtg
cgaggccaaaggcagcccaccaagaaagaaggctctgacatccaggggagtctggcggtt
tgccctgacacccctccctccaagtgcagctcccactcacagagcgccagagctgatggg
aacggacagacggatgtcgcccggagccctctggtagtgttgaggaggttaagccaggaa
atcgttgaaagctcactagtatccagcataatcgtgtccccgggaaagggccagcctctg
acaaggtcaagtgaaaagccttcctcaccagcaaaaagtgattctagtaacgtgttactc
agcaccctgggagaggatctcatctctttgagtcccacctttggcagggtgacttcaggc
tcctggcgactgacgcctcggaggctgttcgcaagcccctccagctcttccgaagcaaca
ggccaggaaccaaaagagcagcccctgccctgcactggccattctccgagagaatccggt
gccgggagctcagccacgctctggaagagctggaccacggaatggtgtggcagccccagg
aggagcggtggaggaacaggtaccaagcgcccctcgcagcctgggcacgaagcctgtgtt
tccacaaagcaagcagagcagaacgaggtgcccaacagcacccctgagctttgcgtgttg
aatgcggcggaggagaagcacaagcaggaggaggcgagggacacagtgcactattactgg
ggcatccccttctgccccaaaggagtggaccccaaccagtacaccaaagtcatcttgtgt
cagctggaggtttaccagaagagcctgaagcaggctcagaggcagctattgcataagaag
gagtttggtaacccagttgtgcccagttcttccttgagcacaaacgagcttgtgaaagga
gagcagataagcagggagaacggggttgctgatgatgcagaagatggagacccagatgga
cagaaggagtctgacagcgtcacctggctcctcccttcaaagaggagggaggcagagagt
ccagggcacagcatggaagaagagaagaactccacttctgacgatgaaccgaccaccagc
tactgccaggcctcccaggtgctgcctgccgaggatgtgcgtgaagacgaggagcccatg
caaattgctcagagcctctccgtgttgaccccacttggcgataaaaggagcccagatatt
gccacagaaaactctgctgaagaagagatctctgtttgcccagagacccagctgagtccg
ctggaagctgtggaggtggagagtgaagaagtttgcttgggcagcagagaggcacctgtg
caggctgatggagatgaagatactggcaggaccgtgtctgagcgcagtcctacagctact
gatcatgtgtcgtgcccactgtgtgcccaaggctttccagctacggagatcgagcggcac
gccatgtactgcaacggcggcgcaggagaggaggctggcagggacactccagtgctcacc
cggcgtcagagagaagcaaaaagtaaagctgccaacagagacagcagcccaacatccttg
gatattgacaagtgtgagaagtgctacctctgtaagtcactggtgccactgctgcagtat
cagaggcacgtggacagctgcctgcaggctgctaggcaagctcagggaaccaggaggctg
cgaagcgccaaggatgctggacggcaggagaggggactcctcaggatgctggaactctcg
gagagcaagtctgcaggtgctgatgtggagacccccctccctggactaggagaccaacag
tcccctcccaccctgtcatccagagccggggggccagtggcagacaccccccgctccctt
cagcaccttcctttctctgtctcccctccaaaacccggtgtctccttctcagaagccacg
gactgtgtggtggacgtggagccacacgcggctcttcgcttgggcagccagcagcagacc
aaaggctgccgccgaagaaagcgcaagttctga
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