Caloenas nicobarica (Nicobar pigeon): 135993942
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Entry
135993942 CDS
T11056
Symbol
GABRP
Name
(RefSeq) gamma-aminobutyric acid receptor subunit pi isoform X1
KO
K05189
gamma-aminobutyric acid receptor subunit pi
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04080
Neuroactive ligand-receptor interaction
cnic04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
135993942 (GABRP)
04082 Neuroactive ligand signaling
135993942 (GABRP)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cnic04040
]
135993942 (GABRP)
Ion channels [BR:
cnic04040
]
Ligand-gated channels
GABA-A
135993942 (GABRP)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
135993942
NCBI-ProteinID:
XP_065500235
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Position
13:complement(15685759..15697874)
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AA seq
445 aa
AA seq
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MFCRYFCFFSLCLFLPIQRRCSLGHVSNLQSSDTTSLPGFENLTMGYNKYLRPYFGGQPV
QIAMSLDIASISSISESDMDYTATIYLQQRWTDPRLVFHGNKSFSLDARLVELLWVPDTY
IVESKRSFLHDVTVGNRLIRLFSNGTILYALRITTTVACNMDLSKYPMDTQTCRLQLESW
GYDENDVVFTWLKGNDSVHGLEKLQLSQYTVERYYTLVSKSQQETGSYPRLILQFELRRN
VLYFILETYVPSTLLVMLSWVSFWITLDSVPARTCIGVTTVLSMTTLMIGSRSSLSKTNC
FIKAIDVYLGICFSFIFGALVEYAMAHYSSSQKCAAKAPQEQPANELTKEMEEVNISNIL
NSSITSYKQKISFTSIEISSDNVNCSDLTMKTHEKIKCVLRNKMHRIIGYFTIQNPSNVD
HYSKLLFPLFFMLVNVFYWAYYLYF
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgttctgcagatatttttgcttcttcagtttgtgtcttttccttccaatccaaaggagg
tgctccctgggtcacgtatccaacttgcagagcagcgacacaacgtccctccctggattt
gagaacctcaccatgggatataacaaatacctccggccctactttggcggacaacctgtt
caaattgcaatgagtctggacatcgcaagtatttctagcatatctgagagcgacatggat
tacacagctacgatttatctgcagcagcgctggacagacccccgcttggtctttcacggc
aacaagagcttctcgctagatgctcgtctcgtggaattgctctgggtaccagacacgtac
attgtggagtccaaaaggtccttcctgcacgatgtcactgtggggaaccgcctcatcaga
ctgttctctaatggcactatcttgtatgccttaagaatcactactaccgttgcttgtaac
atggacctgtcaaaataccccatggacacacaaacatgcagactgcagctagaaagctgg
ggatacgatgaaaacgacgtcgtcttcacgtggttgaaagggaatgactctgtccatggc
ttggaaaagttgcagctctctcagtacacggtggaacgttactataccctggtctcgaag
tcacagcaggaaacaggcagttacccacgactgatattgcagtttgagttgagaaggaat
gtcctttacttcatcttggagacctacgtgccctccactctgctcgtcatgttgtcctgg
gtttctttttggatcacactggattcagtgcctgcaagaacctgcattggagtaacaaca
gtgctttccatgacaactctgatgatcggctcacgaagttcactttcgaaaaccaactgt
ttcattaaggccattgatgtttacctcggcatctgcttcagcttcatctttggtgccctg
gtggaatatgccatggctcactacagctcatcacagaagtgtgcagctaaggcacctcaa
gagcagcctgcaaatgagctcactaaagaaatggaagaagtcaacatcagtaacatcctc
aacagctccatcaccagctataaacagaaaatcagctttacaagcattgagatttcaagc
gataatgtgaactgcagtgacttgaccatgaaaactcatgagaaaatcaaatgtgtcttg
agaaacaaaatgcacaggattattggttatttcacaattcagaaccccagcaatgtagac
cactactccaaattgcttttccctttgtttttcatgctggtcaatgtgttttattgggcc
tattacctatatttttag
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