Caloenas nicobarica (Nicobar pigeon): 135993943
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Entry
135993943 CDS
T11056
Symbol
RBM22
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135993943 (RBM22)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnic03041
]
135993943 (RBM22)
Spliceosome [BR:
cnic03041
]
Complex B
Other components
Prp19-related factors
135993943 (RBM22)
Complex C
135993943 (RBM22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
Nup35_RRM_2
RRM_occluded
zf-CCCH_2
zf-CCCH
RRM_3
zf-CCCH_4
RRM_YTH1
zf-CCCH_3
zf-CCCH_10
zf-CCCH_12
RRM_PARP14_3
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
135993943
NCBI-ProteinID:
XP_065500237
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All DBs
Position
13:7198662..7205711
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AA seq
420 aa
AA seq
DB search
MSTSLGSNTYNRQNWEDADFPILCQTCLGENPYIRMTKEKYGKECKICARPFTVFRWCPG
VRMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPIQVRDAGLSLKDEMPKSDVNKEYYTQN
MEREISNSDGTRPVGALGKATSTSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPDDKTITTLYVGGLG
DTISESDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIVNGRRLNV
KWGRSQAARGKEKDKEGTTESGIKLEPVPGLPGALPPPPAAEEEASANYFNLPPSGPPAV
VNIALPPPPGIAPPPPPGFGPHMFHAMGPPPPFMRAPGPIHYPSQDPQRMGAHAGKHSSP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtccacatcgctgggctccaacacctacaaccggcagaactgggaggacgcggacttc
cccatcctgtgccagacatgccttggagaaaacccatatatccgaatgaccaaagaaaaa
tatggaaaagaatgcaagatttgtgccaggcctttcacagtatttcgctggtgcccgggt
gttcgtatgcgtttcaagaaaacagaagtatgccagacatgcagcaagctgaagaacgtc
tgtcaaacctgcttgcttgacctggaatatggtttgcctattcaagtccgggatgcagga
ctctccctcaaggatgaaatgcccaagtctgacgttaataaagagtattacacccagaac
atggaacgagagatatccaattctgatggcaccagaccagttggtgcgctaggaaaagct
acttctaccagtgacatgctgctgaagctggctcggaccactccttactataaacgtaac
cgtcctcacatctgttccttctgggtaaagggagaatgcaagagaggagaagagtgtccc
tacaggcatgagaagccaacagatccagacgatcctctggctgatcagaacatcaaagat
cgttactacggaattaatgatcctgtggctgataaacttctgaaacgagcatcaaccatg
cctcgtctagacccccctgatgacaagactattactaccctctatgttggagggcttgga
gatactatctctgaatcagatctcagaaatcacttctaccagtttggggagattcggacg
ataactgtggtgcagcggcagcagtgcgcgttcatccagtttgccacccggcaggctgcg
gaggtggctgctgagaaatccttcaacaaactcattgtcaacggtcgcaggctgaatgtc
aaatggggaaggtcacaggcagcaagaggaaaagaaaaggacaaggaaggtactacagaa
tctggtataaagctggagccagttccagggcttcctggagctctcccccctcctccagct
gcagaagaggaggcttctgcaaattacttcaacctacctccgagcggccctccagccgtg
gttaacatcgccttgccacctcctcctggcattgctccgccaccacctccaggtttcgga
ccacacatgttccatgccatggggcctccacctcccttcatgagagccccgggccccatc
cactacccatcccaggatccccagaggatgggtgcccacgcagggaagcacagcagcccc
tag
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