Caloenas nicobarica (Nicobar pigeon): 135994019
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Entry
135994019 CDS
T11056
Symbol
FBXO38
Name
(RefSeq) F-box only protein 38 isoform X1
KO
K10313
F-box protein 38
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnic04121
]
135994019 (FBXO38)
Ubiquitin system [BR:
cnic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
135994019 (FBXO38)
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Paralog
GFIT
Motif
Pfam:
F-box
F-box-like
Motif
Other DBs
NCBI-GeneID:
135994019
NCBI-ProteinID:
XP_065500360
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All DBs
Position
13:1729156..1751716
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AA seq
1181 aa
AA seq
DB search
MGPRRKSVKPSAVNREGSQSTKADEPKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKL
KEAVTLYLRVVKVVDLCAGRWWEYMPTGFTDSSFLTLLRKMPDIEQLYGLHPRYLERRRV
RGHEAFSIPGVLEALQACPNLLGVETSHLELVEAIWTYMPQVHILGKFRNRNGAFPIPPE
NKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYLKWVRLTKPQPFKDFLCISLRTFVMR
NCAGPTNSLKYVPLVTGLASARNLEHLELVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVL
GACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDE
FLLQCKMTNGDLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLVIYNCPHLHNPNNWI
TDHSRWTRLVDLTLVRCHAIKLDSFSQFIELLPSLEFISLDQMFREPPKGCARVGLSAGT
GIGVSSALVSNQNSNNDNDNNNNHQNNNNPNIHHNNHQHPNDQNEENELRQDGQAEEQQI
AAEALNEMEEVAHEEGVAAGLGQNEAPVHSQAVVPMEIDEEQAGPSGIQSVVKAAPITVH
DSDSEDEEENMGSSRACISNSIAQNYSDGEEKSRDPVERRETSVSGKGKTPLRKRCSASQ
AGQPKPFHSEESSCEKGCQVTSEQIKADMKAASDMPERNKSKDSYPGCSNATGSTGTSSS
CGAVPAGPDCAQAANSPCAGAESGRCVCSPCQHRDSSRRHAEESSGCSRCCCYKPQDAQQ
RTSGSCDAECPSTSGACRNGPNSTAADFALRTLPNCGPAGGTSDERTSGGACGPARDEEG
TGSQPRGWEMELKEEYPRRPLTRARSKLSHVPLVSESEVAKPKPRQTTKRKRTADKSTST
SDPVIEDDHIQVLTLKSKNLVGITLTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENA
PVVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKIFSGPYPYHI
CIIHEFSNPPNVRNKVRVRSWMDTIANINQELIKYEFFPEATRTEEDLKKYTKYPWGRDI
YTLEGIVDGAPYSMITDFPWLRSLRTAEPNSYARYDFEDDERTTIYAPRRKGQLSADICM
ETIGEEISELRQMKKGVFQRVVAIFIHYCDVNGEPVDDDYI
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgggtccccggcggaaaagtgtgaaaccaagtgcggtgaacagggaaggctcccagtcc
accaaagctgatgagccaaaggattatatgaaccagctctctcatgaagtgctttgccac
atctttaggtaccttcccttgcaggatatcatgtgcatggaatgcctgtcgcggaagctg
aaggaagcggtcacgctgtacctgcgcgtggtgaaggtcgtggatctgtgtgccggccgc
tggtgggaatacatgcccactggtttcactgattccagtttcctaacgctgctgcggaag
atgccagacattgaacaactttatggtcttcatcccaggtatcttgaaagacgcagagtc
cgtggccatgaagctttcagcattcctggagttttagaggctttgcaggcctgtccaaat
ctgctgggcgttgagacctctcatttagagctggtggaagctatttggacatatatgcca
caggttcatattttagggaagtttcgtaatcgcaatggtgcttttccaattcctccagag
aacaagctgaaaattcctataggagctaaaattcagactttgcacttagtaggagtgaat
gtccctgagattccttgtatcccaatgctgaggcacctttatttgaagtgggtgagactc
acgaaaccacagccttttaaagatttcctttgtatcagcttacgcacttttgtcatgagg
aactgtgccggacccacaaattctttgaagtacgttcctctagtgacgggcctggcttct
gctcgaaatctggagcatttagaactggttcgtgttccatttcttggaggacttatccag
catgtggtagaagatagttggagatcaggtggttttaggaatttgcacactatagttctg
ggagcttgcaagaatgcacttgaagtggatcttggctacctcatcataactgctgcacga
aggttgcatgaagtgcggatccagccttccttgaccaaagatggtgttttttctgctctg
aagatggctgaactggaatttccacagtttgaaactcttcatctaggatacgttgatgaa
tttttactacagtgtaaaatgacgaatggagacttggtgaagtatggcttggctgatgtg
gttgaaaatccaggaattattacagatattggtatgaaagctgtaaatgaagttttttct
tgcatcaagtacctcgtcatttacaactgcccacatctacacaacccaaataattggatc
acagatcattcaaggtggacccgactggttgacctcaccctggtgcgatgccatgcgata
aaactagattcttttagtcagttcattgagttattgccaagcttagaatttatttctttg
gaccagatgttccgtgaacctcctaagggttgtgctcgcgtgggtctaagcgcaggcaca
ggaattggtgtgtcgtctgccctggtcagcaatcagaactctaacaatgacaatgacaac
aacaataaccaccagaataacaataatcccaacatccaccacaacaatcaccaacaccca
aatgaccagaatgaggagaatgagctgcggcaagatggtcaagctgaagagcagcagatt
gcagctgaggcactgaatgagatggaggaggtggcacatgaagaaggggtggctgccgga
ctgggacagaatgaggccccggttcacagccaggctgttgttcctatggagatcgatgaa
gagcaagcaggacccagtggcattcagtccgttgtaaaagcagcacctattactgtccac
gattcagacagtgaagatgaggaagaaaacatggggtcttcaagagcctgcatctcgaac
agcattgcacagaactactcagacggagaagagaaaagcagagatccagtggaaaggaga
gaaacttcagtgagcggcaaaggcaagacgccgctgcggaagaggtgtagcgccagccag
gcggggcagccgaagccgttccactcagaggagagcagctgtgagaagggctgtcaagta
acgagcgagcagattaaagcggacatgaaagcagcaagtgacatgcctgaaaggaacaaa
agcaaggattcttacccaggttgcagtaacgctacgggatcaacgggaacatccagctcc
tgcggtgctgttcctgccggccctgactgcgcacaggcggccaatagcccctgtgctggg
gctgaatccgggcggtgtgtctgctcgccttgtcaacaccgagattctagcaggagacac
gctgaggagagctctgggtgttccaggtgttgctgctacaagccgcaggatgcgcagcag
aggactagtgggtcttgcgatgcggagtgtccgtcaacgagcggagcctgcaggaatgga
ccaaacagcactgccgccgattttgcacttaggactctgccgaactgtgggcctgcagga
gggacgagtgacgagaggactagtgggggtgcctgtgggcctgccagggacgaggagggc
acgggctcgcagccaaggggctgggagatggagcttaaagaagaatatcctcggcgacca
ctaacgagagctagaagcaagctgtcccatgttcctctggtgtctgagtcagaggtggcc
aagccaaagccacggcaaaccacaaagcggaaaaggacagcggacaagtccacgagcaca
agtgacccggttattgaagatgatcatattcaagtactgactttgaaatccaaaaacctt
gttggaatcaccttgaccaactgtggaataacagatttggtactgaaagactgtcccaaa
atgatgttcatacatgctacaaggtgccgtgtattgaaacacttaaaagtagaaaatgca
ccggtcgtcaatcggtttgactatgcgcagtgcaagaaattaaacatggatcaggttctg
gatcagattcttaggatgccgccggaaagaaaccggatcatttatcttcgtccaatgcag
caggttgacacgttgactcttgagcaaaagatatttagtggtccttatccgtaccatatt
tgcataattcatgaattcagtaacccacctaacgtccgcaacaaggtgcgcgttcggagc
tggatggacacaatagcaaatatcaaccaagagctcattaaatacgagttcttccctgaa
gctacacgaactgaggaggacctgaagaaatacactaagtacccttggggacgagatatt
tacactctggaaggcattgtggacggtgccccgtactccatgatcaccgacttcccatgg
ctgaggtctctgagaacagccgagccaaacagctacgctcgctacgactttgaggatgat
gagagaactactatttatgctccgcggagaaaaggacaattgtctgcggacatctgcatg
gaaacaataggagaagagatctcggagctgcggcagatgaagaagggcgtgttccagcgg
gtggtcgccatcttcatccactactgcgacgtcaacggggaacccgtagatgacgattac
atctga
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