Caloenas nicobarica (Nicobar pigeon): 135994050
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Entry
135994050 CDS
T11056
Symbol
CDX1
Name
(RefSeq) homeobox protein CDX-1
KO
K09312
homeobox protein CDX1/4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135994050 (CDX1)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
135994050 (CDX1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
YdaS_toxin
HTH_NDX
Motif
Other DBs
NCBI-GeneID:
135994050
NCBI-ProteinID:
XP_065500413
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Position
13:complement(7401642..7414817)
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AA seq
259 aa
AA seq
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MYVGYLLDKDTNMYPSPVRHPSLNLNTQNYVPGPPQYTDFASYHHVPGINNDPHHGQPAA
AWGSPYTPAKEDWHSYGTAAAPSTASPGQFGFSPPDFNSIQPPGSGLLPPPISSSVPQLS
PNAQRRTPYEWMRRSIPSTSSSGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRKAE
LAAALGLTERQVKIWFQNRRAKERKVNKKKMQQQSQPTSTTTPTPPAVGTPGPIGGLCSS
STPNLVSSSPLTIKEEFMP
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtaggttatcttttggataaggacaccaacatgtatcccagccctgtccggcat
cccagcctcaacctcaacacccagaattatgtgccggggccaccccagtacacggacttc
gccagctaccaccatgtgccagggattaacaacgacccgcaccacgggcagccggcggcc
gcctggggctctccctacacccctgccaaggaggactggcattcctacggcaccgccgcc
gcgccttccaccgccagcccggggcagtttggattcagccccccagattttaactccatc
cagcccccgggctctggactcctgcctccacccatcagcagctcggtcccccagctctcc
cctaatgcccagagacgcaccccgtatgagtggatgaggcgcagcattcccagcaccagc
agcagcggcaagacaaggacaaaagacaagtaccgggtggtctacacagaccaccagcgc
ctggagctggagaaggaatttcactacagccgctacatcaccatccgccgcaaggccgag
ctggccgctgccctcgggctcaccgaacggcaggtgaaaatctggtttcaaaatcggagg
gcgaaggagaggaaggtgaacaagaagaagatgcagcagcaaagccagcccaccagcacc
accacgcctaccccgccggctgtcggcacgccaggacccatcggaggcctctgcagcagc
agcaccccaaacctcgtctcctcatctcccctgacaatcaaggaggagttcatgccttag
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