KEGG   Caloenas nicobarica (Nicobar pigeon): 135994083
Entry
135994083         CDS       T11056                                 
Symbol
LARP1
Name
(RefSeq) la-related protein 1 isoform X1
  KO
K18757  la-related protein 1
Organism
cnic  Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:cnic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cnic03019]
    135994083 (LARP1)
Messenger RNA biogenesis [BR:cnic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     135994083 (LARP1)
SSDB
Motif
Pfam: LARP1_HEAT La
Other DBs
NCBI-GeneID: 135994083
NCBI-ProteinID: XP_065500451
LinkDB
Position
13:complement(5992366..6039220)
AA seq 1053 aa
MATQVEALLPGAPLLAAEERALVLKPPQDGGREKGESPMGPDGGPGAPRPPSAKQQKEES
NNQEKESLLRAGGEAEDGGEAGGAGRREFIEAPPPKVNPWTKNAPAAAPAVNGQSPPDIF
PPDGQSEHTTPAKVVRAANPRQRKGSKVGDFGDATNWPTPGEIAHKSVQQPHKAPSLRKL
PVKKDMKEQEKGDGSDGKESLKTKSDESGEEKNGDDDNQKSAQKKKGNKHKWVPLQIDMK
SEVPRDKTASRNNRQNEQHRHPSNNRGELKGWHPDNKHERSWQDHDETSSVKSEGGAVRG
AFRGRGRGRGRGRGRGRGGHFDYQYGYRKFEGSDGSRTQKYASNITYYFDNISSAELYSV
DQELLKDYIKRQIEYYFSVDNLERDFFLRRKMDSDGFLPITLIASFHRVQALTTDISLII
KALKDSKVVEIVDEKIRRKEQPEKWALPGPPMADYTQTDFSQFINCPEFVPRQSFQKETE
SAPGSPRPASPVPTKTEEVSNLKTMPKGLSASLPDLDSETWIEVKKRPRPSPARPKKPEE
SKTPQQQKQKDQDEPEELDFLFDEEMEQMDGRKNTFTDWSDEDSDYEIDDRDVNKILIVT
QTPPYLRRHPGGDRTGNHTSRAKMSSELAKVINDGLYYYEQDLWTEQFEPEYSQIKQEVE
NFKKVNMISREQFDTLTPEPPVDPNQEVPPGPPRFQQVPTDALANKLFGVPEPSTIARSL
PTTVPESPNYRNARTPRTPRTPQLKDPTQTPRFYPVVKEGRTIDAKTPRKRKTRHSSNPP
MECHVGWVMDSREHRPRTASISSSPSEGTPAVGSYGCTPQSLPKFQHPSHELLKENGFTQ
HVYHKYRRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNKKMYEEFKQLAVEDGKEGY
RYGLECLFRYYSYGLEKKFRPDIFKDFQEETIKDYEAGQLYGLEKFWAFLKYSKAKNLDI
NSKLQEYLSKFKRLEDFRVDPPMGEEGGHKRYPTTSGGDGRKRYPSQSSSKTVSQCPSSQ
AHTSPSQPAQEDAKNLSQQSPAPLAAEPQTVGK
NT seq 3162 nt   +upstreamnt  +downstreamnt
atggcgacgcaggtggaggcgctgctgcccggcgccccgctgctggccgccgaggagcgc
gccctggtgctgaagccgccgcaggacggcggccgggagaagggcgagtcgcccatgggc
cccgacggcggccccggggcgccgcggccgcccagcgccaagcagcagaaggaggagagc
aacaaccaggagaaggagagcctgctgagggcgggcggcgaggcggaggacggcggcgag
gcgggcggcgcggggcgccgggagttcatcgaggccccgccgcccaaggtgaacccctgg
acgaagaacgcccccgccgccgcgccggcagtgaacgggcagtcgcctccagatatattt
ccacctgatggccagtctgaacacacaactcctgcaaaagtggtgagggctgccaaccca
agacagcggaaagggagcaaggttggtgatttcggtgatgccacgaattggccaacacct
ggagaaatagcccacaagagtgtccagcagccgcacaaagcaccgtcccttcggaaactg
cctgtcaagaaagacatgaaagagcaggaaaaaggggatgggagcgatggcaaagagagc
ctgaaaaccaaatcagatgagtctggggaggagaagaatggtgatgatgacaaccagaag
tcagcgcagaagaagaaaggcaacaaacacaagtgggtccctttgcagatagacatgaag
tcagaggtgcctagggacaaaacggcctctcggaacaaccggcaaaatgagcagcacagg
cacccctccaacaaccgcggcgagctgaaaggctggcacccggacaacaaacatgagcgc
agctggcaggaccacgatgaaacctccagcgtgaaaagcgaggggggagctgtgcgtggg
gctttccggggccgaggtcggggccgtggcaggggccggggccgtggcagaggaggccac
ttcgactaccagtatgggtaccggaaattcgagggctcagatggctcccgtacccagaag
tacgctagcaacatcacttactacttcgacaacatcagcagcgccgagctctacagcgtg
gaccaggagctgctcaaagactacatcaagcggcagatagaatattacttcagcgtggac
aacctggagcgagacttcttcctccgtcgcaagatggactcagacggcttccttcccatc
accctgattgccagcttccaccgggtgcaggccctgaccactgacatcagcctcatcatc
aaggccctgaaggacagcaaggtagtggaaatcgtggacgagaagatcaggagaaaagag
cagccagaaaaatgggctctgcctggccctcctatggcagactacacacagacagacttc
tcgcagttcatcaactgccctgagtttgtgccccggcaaagcttccagaaagagacagag
tctgctcctggctcgccacgtcccgccagcccggtccccaccaaaacagaggaggtcagt
aacctgaagacaatgcccaagggcctgtctgcaagtctgccagacctggattcagagaca
tggatcgaagtgaagaagagacctcggccctccccagccaggcccaagaaaccagaggag
tcaaagacaccgcagcagcagaagcaaaaggaccaagatgaacccgaggaactagacttc
ctcttcgatgaggagatggagcaaatggatggccgcaagaacaccttcaccgactggtca
gatgaagattcggattatgagattgacgatagggacgtgaacaagattctcatcgtgaca
cagacgcctccttacctgcgccggcatcctggcggggaccggactggcaaccacacatcc
agggctaaaatgagctcagagctggccaaggtgatcaacgatgggctgtactactacgag
caggacctgtggacagagcagtttgagccagagtattcacagatcaagcaagaagtagag
aacttcaagaaagtgaatatgatcagcagggagcagtttgacaccctgaccccagagccc
cctgtggatccaaaccaggaagtccctcctggtccccccaggttccagcaagtacctaca
gatgctttggctaacaagttgtttggagtccctgagccttcaaccatcgcccggtctctg
cctacaactgtaccagaatcacccaactaccgcaacgccaggaccccccggacccctcgc
acgcctcagctgaaggacccaacgcagacgccccgtttctacccggtggtgaaagagggc
aggacgatagatgccaagactccgcggaagaggaagacacggcacagttcaaaccccccg
atggaatgccacgtgggctgggtgatggactctcgggagcacaggccccgaactgcctcc
atcagctccagcccctcggagggaaccccggccgtcggaagctacggctgcaccccgcag
tccctgcccaaattccagcatccttcgcacgagctgctcaaggagaacggcttcacgcaa
cacgtctaccacaagtaccgtcggcgctgccttaacgagaggaaacgactgggcatcggt
cagtcccaggagatgaacacgcttttccggttctggtccttcttcctccgagatcacttc
aacaagaaaatgtatgaggagttcaagcaactggctgtggaggacgggaaggagggatac
aggtacggtctggagtgccttttcagatactacagctacgggctggagaagaaattccgg
ccagacatctttaaggactttcaagaagagaccatcaaggattacgaagctggacagctg
tatgggctggaaaagttctgggccttcttaaaatattccaaagccaaaaatctggacatc
aacagcaaactgcaagaatacctcagcaagttcaagcgccttgaggacttccgagtggat
ccacccatgggggaggaaggtggacacaagagataccctacaacgtcaggaggagatggc
aggaagcgctacccatcccagtcttccagcaaaacggtcagccagtgcccatccagccaa
gcccacacctcacccagccagcctgcacaagaggatgccaaaaatctgagccagcaatcc
cctgcccccttggctgcagaaccgcagacagtggggaagtag

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