Caloenas nicobarica (Nicobar pigeon): 135994091
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Entry
135994091 CDS
T11056
Symbol
PDLIM7
Name
(RefSeq) PDZ and LIM domain protein 7
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135994091 (PDLIM7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cnic04990
]
135994091 (PDLIM7)
Domain-containing proteins not elsewhere classified [BR:
cnic04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
135994091 (PDLIM7)
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
PDZ_6
Serpentine_r_xa
Motif
Other DBs
NCBI-GeneID:
135994091
NCBI-ProteinID:
XP_065500464
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Position
13:complement(3907084..3924437)
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AA seq
881 aa
AA seq
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MGDMESYKVMLNGPAPWGFRLQGGKDFSMPLSISRLTPGGKAAQAGVGVGDWVLYIDGEN
TSSMTHIEAQNRIRACGDRLCLTLSRAQNHLGKPQKHCPQQNSSALRGQLTSESTARAGD
ETCDVRAPGACLHPPAQWVLSLDKQPPQLLVSPSTPTYDPVKLQLIENAVDWQPRIGRTQ
SRSFHKLARLTGTDGMEDHEDELVSKPRDARGSVGGTVEQWQPSQPPEPPSTPVCDPGKL
RLMEDAVDWQPRTGTSQSRSFHKLARLTGTDGMEDHEDELVSKPRDARGSVGGTVEQWQP
SQPPEPPSTPVCDPGKLRLMEDAVDWQPRTGTSQSRSFRKLARLTGTDGMEDHEDELVSK
PSSVSCCCFFSLLLLLFLLLCPPFSLCSLPFPRAELLVQLQSLPCAHPVMGTASAQPLLG
CGGGYGHWQHLAGDVRRCWAVPGPGARCPVSLAWGYRQPGRAEDARGSVGGTVEQWQPSQ
PLKPPSTPVCDPGKLRLMEDAVDWQPRTGTSQSRSFRKLARLTGTDGMEDHEDELVSKPR
VPAEHLPSVPRRQPSQPPEPPSTPVCDPGKLRLMEDAVDWQPRTGTSQSRSFRKLARLTG
TDGMEDHDDVFVKKPSQVSVLDPSPGAAMKTEPGLAPRTPTATPGPASRPPWAVDPSFAE
RYAPDKTSTVVSKHSQPATPTPMQNRSSIVQAAQQSPEGPGRTPLCYKCNKVIRGRYLVA
LGHYYHPEEFTCCQCRKVLDEGGFFEEKGSIFCPKCYDTRYAPSCAKCKKKITGEVMHAL
KMTWHVQCFTCAACKTPIRNRAFYMEEGQPYCERDYEKMFGTKCRGCDFKIDAGDRFLEA
LGFSWHDTCFVCAICQTNLEGKTFYSKKDKPLCKSHAFSHV
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatatggagtcctacaaggtgatgctgaacgggccggcaccctggggcttcagg
ctgcagggagggaaggatttcagcatgccactctccatctccaggctgacgccgggcggg
aaggcggcccaggccggcgtgggagtgggtgactgggtgctgtacatcgacggggagaac
accagctccatgacgcacatcgaggcccagaacaggatccgtgcctgcggggacaggctc
tgcctcaccctgagcagagcccagaaccacctggggaagccgcagaagcactgccctcaa
caaaacagctcggcccttcggggccagctcacctccgaatctacggcccgggctggtgac
gaaacctgtgacgtacgcgcccctggcgcctgcctgcaccccccagcacaatgggtgctg
agccttgacaagcagcctccacagctgctggtgtccccgagcacccccacgtatgaccct
gtgaagttgcagctgatagagaacgctgtggactggcagccccgcatcgggaggacccag
tcacgctccttccacaaactggcccggctgacgggcacagacggcatggaggatcatgag
gatgagcttgtttcaaagcccagggatgctcgtgggtctgtcgggggcacggtggagcag
tggcagccctcgcagccgccggagccccccagcacccctgtgtgcgaccccgggaagctg
cggctgatggaggatgctgtggactggcagccccgcaccgggacctcccagtcgcgctcc
ttccacaaactggcccgtctgacgggcacagacggcatggaggatcatgaggatgagctt
gtttcaaagcccagggatgctcgtgggtctgtcgggggcacggtggagcagtggcagccc
tcgcagccgccggagccccccagcacccctgtgtgcgaccctgggaagctgcggctgatg
gaggacgctgtggactggcagccccgcaccgggacctcccagtcgcgctccttccgcaaa
ctggcccggctgacgggcacagacggcatggaggatcatgaggatgagcttgtttcaaag
cccagctctgtgtcctgttgctgtttcttctctcttcttctcctcctattcctcctcctc
tgtcctccgttctctctctgttctctccctttccccagagctgagctgttggtgcagctg
cagagcctgccctgcgctcaccccgtgatgggcaccgccagcgctcagccactgctcgga
tgtggaggaggctatgggcactggcaacaccttgctggggatgttcggaggtgctgggca
gtgcctggtcctggggcacgatgtcctgtgagcctggcgtggggctacaggcaaccgggc
agagctgaggatgctcgtgggtctgtcgggggcacggtggagcagtggcagccctcgcag
ccgctgaagccccccagcacccctgtgtgcgaccccgggaagctgcggctgatggaggac
gctgtggactggcagccccgcaccgggacctcccagtcgcgctccttccgcaaactggcc
cggctgacgggcacagacggcatggaggatcatgaggatgagcttgtttcaaagcccagg
gtgccggctgagcacctgccctctgtccctcgcaggcagccctcgcagccgccggagccc
cccagcacccctgtgtgcgaccccgggaagctgcggctgatggaggatgctgtggactgg
cagccccgcaccgggacctcccagtcgcgctccttccgcaaactggcccggctgacgggc
acagacggcatggaggatcatgatgatgtgtttgttaaaaagcccagccaggtctccgtg
ctcgacccatccccaggagcagcgatgaagacggagccgggattggcccccaggactccc
accgccacccccggccctgccagccgcccaccctgggctgtggacccctcgttcgctgag
cgctacgcaccagacaagacaagcacagtggtgagcaagcacagccagccggccacgccg
acccccatgcagaaccgcagctccatcgtgcaggcagcgcagcagagccccgaggggccg
ggccgcacacccctctgctacaagtgcaacaaggtcatcaggggacgctacctggtggct
ttgggacattattaccaccccgaggagttcacctgctgccagtgcaggaaggtgctggat
gagggcggcttcttcgaggaaaaaggctccatcttctgtcccaagtgctacgacacacgc
tatgcgcccagctgcgccaagtgcaagaagaagatcactggggaggtgatgcatgcgctg
aagatgacctggcatgtgcagtgcttcacctgtgctgcctgcaaaactcccatccgcaac
cgtgccttctacatggaggagggacagccctactgtgagagagactacgagaagatgttt
ggtaccaagtgccgtggctgcgacttcaagattgacgctggggaccggttcctggaggcg
ctggggttcagctggcatgacacttgcttcgtctgtgcgatctgccagaccaacctggaa
gggaagacattctactccaagaaggacaagccgctctgcaagagccacgctttctcccac
gtgtga
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