Caloenas nicobarica (Nicobar pigeon): 135994161
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Entry
135994161 CDS
T11056
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnic02000
]
135994161 (TMC5)
03037 Cilium and associated proteins [BR:
cnic03037
]
135994161 (TMC5)
Transporters [BR:
cnic02000
]
Other transporters
Pores ion channels [TC:
1
]
135994161 (TMC5)
Cilium and associated proteins [BR:
cnic03037
]
Other cilia and associated proteins
Stereociliary proteins
135994161 (TMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
SYCE1
Motif
Other DBs
NCBI-GeneID:
135994161
NCBI-ProteinID:
XP_065500567
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All DBs
Position
14:16401375..16422713
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AA seq
814 aa
AA seq
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MSYHYNEAFENPDYHFSETLEIERKRSFQKNLFSHQTPYDSSLHVSSGEHSGRGWDYPLA
VQMASMRHGSEYSEGLPGVNVLSRSPHGNSMDNLAFEPEPELAHSPPSTSHLLDHPNTRR
ISTVSEEEKLVGNLASMSTSERIKAIQKMPENMKKKREIRNKVLKEITEKSRPGRTHFFH
CTQCLQGPALLFRRFGNSLAEYFHLLQLWHRTLKIIGAEFGTSVLSYFIFLKWLLTFNLF
SFLINFSFITIPQFLAAEPNNVSFTGLELFTGAGYFQQTVLYYGFYTNATISKIKNGPSY
NMQLAYIFTVGIYFAICFLILLISMAKSFCRNFINPQTYSGNASRLLCTWDFNITNEKAV
KLKQKNLSTQIKEDLMEVNREVLHLSVTERLARIVIHLVSWAASLGTAVAACAGVYFLST
NNAELFVKGHENDLESQAATLVLPIVTSLLNTFIPFFYSWLGHLERFQTPGYQIYVTITR
NIILKISIVGILCYYWLNVVAASQSQCWETLVGQDIYRLVLVNFIFCLLGSFFGEFLRRI
IGTTVRVSWGPPEFDIGRNVLELIYAQTLTWIGILFSPLLPGIQMIAFSIVFYVKKVSLM
MNCQPPRKVWRTAQMTTSFMFLLFFPSFLGVLSVVAVTVWRLKPSEECGPFRGLSSMYAA
VSNWIKILEDYTASKWVVWIYYNLITSELFFFILSALVLIITYLYWQIVEGRKTMARLLR
KQIINEGKDKMFLLKKLWALQRAKQTPPAPRGQGQQSPYSAGSSRGTGFPQAPSSGSGTG
AAQALALALRAREAALWEDEDDDRFLTTTGWNQY
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatcattacaatgaagcctttgaaaatccagactaccacttctcagagacactg
gaaattgagagaaagaggagttttcaaaagaacctgttctctcaccaaaccccttacgat
tcttcactgcatgtttcctctggagaacacagtggaagaggatgggattaccctctggcc
gtacaaatggcctccatgaggcatggctctgaatacagcgaaggtttaccaggagttaat
gtcctaagcagaagtcctcatggaaattccatggataatcttgcctttgagcctgagcca
gaactggcacacagcccaccttctacctcccatctgctggatcaccccaatacccgcaga
atttccactgtatcggaagaggaaaagttagttggaaatcttgcgagtatgtccaccagt
gaaaggattaaagcaatccagaagatgccagagaacatgaaaaaaaagagagaaatcagg
aataaagttcttaaagaaataacagaaaaatcacggcctggcagaactcactttttccac
tgcacacagtgtctgcagggaccagcactgctgtttcggcgatttggaaatagcttggca
gaatattttcacctactgcagttatggcacaggactctgaagattattggtgcagagttt
ggaacaagtgtcctttcttattttattttcttgaagtggctgctaactttcaacctcttc
tcattcctcataaacttcagtttcatcacaatccctcagtttcttgcagcagaaccaaat
aacgtttcattcactggtctggagctgttcactggagctggttattttcagcaaacagta
ctctactatggcttttacaccaatgctacaatcagtaaaataaagaatggtccatcttac
aacatgcagctggcctatattttcactgttggaatatattttgccatctgttttcttatc
ttgttgatcagcatggcaaaatccttctgcaggaacttcattaacccccagacatactct
ggaaacgccagcaggcttctctgcacttgggacttcaacataactaacgaaaaagccgtg
aagctgaaacaaaagaatctcagcacacagataaaggaagacctcatggaagtaaaccga
gaagttctacatctttctgtaacggagagacttgctcgtattgttattcaccttgtttct
tgggctgcttccctgggaacagcagtagctgcttgcgctggtgtttacttcctctccact
aataacgcagagctgtttgtgaaagggcatgaaaatgaccttgagagccaagctgccacg
ttggtgctacctattgtcacatctctcctcaacacattcatcccattcttctattcctgg
cttggacacctggagagatttcagactcctggataccagatatatgtcaccattacaaga
aatatcatcctgaagatatcaattgttggaatactgtgctactactggcttaacgttgtg
gctgcatcacagtcgcagtgctgggagactctggttggccaggatatctatcgtcttgtt
ctagttaacttcatattttgtttgcttggctctttctttggagagtttttacgaagaatt
atcggaactacagtccgtgtgagctgggggccgcctgaatttgatattggacgaaatgtt
ttagagttgatctatgcacagactttgacctggattggtatcctgttctcacctctgctg
cctggtatccagatgatagcgttttctatagtattttacgtgaaaaaggtcagtctcatg
atgaattgccaaccgcctcgcaaagtctggagaacggcacaaatgacgacgtccttcatg
ttcctgctgtttttcccctccttcctgggagtcctgtcagtcgtcgcagtcaccgtctgg
aggttaaaaccttcagaagagtgtggtcccttcagaggtttgtcttctatgtatgctgcg
gtctccaactggataaaaatactggaagattacactgcctcaaaatgggttgtgtggatc
tactataacttaattacaagtgaacttttcttcttcatcctctccgctcttgtcctaatt
attacttatctttactggcaaatagtagaaggaagaaagaccatggccagactcttacgc
aagcaaattattaatgaaggaaaagataaaatgtttttacttaaaaaactatgggcactg
caaagggcgaaacaaactccacctgcaccaagaggacaaggccagcagtctccctactcc
gctgggagctcgagaggcaccggcttcccacaagcaccgagctccggcagcggcaccggc
gcggcacaggccctggcactcgctctgcgcgctagagaggcagctctgtgggaagacgaa
gacgacgacagatttttgaccacgaccgggtggaatcaatactga
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