Caloenas nicobarica (Nicobar pigeon): 135994162
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Entry
135994162 CDS
T11056
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RBBP6-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cnic04121
]
135994162
Enzymes [BR:
cnic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135994162
Ubiquitin system [BR:
cnic04121
]
Ubiquitin ligases (E3)
U-box type E3
135994162
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_3
zf-C3HC4_2
zf-CCHC
zf-RING_2
zf-RING_5
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
135994162
NCBI-ProteinID:
XP_065500568
LinkDB
All DBs
Position
14:16609948..16637716
Genome browser
AA seq
1927 aa
AA seq
DB search
MAVPGPPRPRTGERGPESGDQGPERGPHGGSTTLRLPTGTTAPQPASPGLVPAPWDRHLC
PVLMLTAPPPASLPPSGTGITESQNVRSSGARAASCAWERCGPELRPQAPFPPVRPPGLW
ARAQPAPLAPTPSVDPSPCRRGDKPGVGDTTPFATVDAATEQHHLAMAASHVYYKFFSNL
NYDVATFHGLHISLRELKRQIMRRKKLKPTNCDLLVTNAQTKEEYTDDNALIPKNSSVIV
RRIPAERVKATSKTYVITPKSHKILQSAFRRHFXSRTEPVSGPSKAIDDSSAPISLAQLI
KAANVAETNASEEEKIKAMTQSCQEYDPVNFMKKNLGPLPSSYTCFRCGKPGHYIKNCPT
NRDKNFESVPRIKKSTGIPRSFLMEVKDPNTKGAMLTNTGRYAIPTINAEAYARGKKEKP
PFLPAEPPSSSSFADDDSVPDELLCLICKDIVTDAVVIPCCGNSYCDECIRTALLESKEH
TCPMCHQTDVSPDGLVANKILRQAVNNFRNGTGYSKQIQQQQQHQLPPPLMRETITRNLQ
PPLRPTISRQKDPLITPSASLSSHSAALSSFGPTQASAAAERPGILPSVIVSDAPPAVSL
PFRAEKPGGPFREADAVIPPAALVTAAELPKSSSLTISSLLEEQGYQVPVLRQPALTSLL
SPQGQSIPPTGRPMRASTIWPARGRPGWEPSNQGCLHSEHTQRTQAPTXATPPVSMPMPP
PPLCLPAPHTLPFPAMVASPQFPPQSPPGHPRRAGCTVSLPGHSPAPENMPSAWVPTNTT
PRTQAPPLSREEFYREXQRHKEEEKKKSKLDEFTNDFAKELMEYKRIQKEHRRLFSRSRS
PCDASSYSRSSYTYSKSRSGSSHSRTYSRSFSHSQSRSSSRSPPYLRRGKVNSRDHHSSS
RSHCYYHSRSRPCRRCRSRSRSPLLRGQSHAKGTIPQGEGEREYFNRHAEVPAYNMKDYY
GRPVDFRDPFENERYREWERNYREWYGKFYKGCAVGAQPPPAVNRENFSPERFGPPETRQ
ENSPYAWGNREDYPGGQSHRSHNVSGDYCEKPSGRERHGISDPRKSKEKEVKYPWGDGKG
NKYERHQKRRKCNENEGFPSAELLEGARKPREPVTAGDDKTDSLFMLPSRDDATPVRDEP
MEIDSIAFKPVSEEERTEEDKPKEKNDNTKWKVEVAVPPKKDDIIIPAKTSQETVDTDCE
NSPQMEPPAKKVKEELPKTDNVIISSSQKDEKAPGTPWKFHPEVTKDHLETRTAKDEKVK
KDHPKETKSEKPSKEDKSKNVEKSKTSDAKPEKSKGKVDEEVVKEHEATSIDASKPETAE
WKTSPKGKTEFDAEKGELTPEKDKSAFLNQPAKKIELNQETGKKIVSGENVPPAKELVEK
PKASSSNVKQEKAKGEVQIKVTAADGSSSVLVDYTSSSSTEGRPVTKTEENPDTKQTIIK
TMEEYNNDITAPAEDVILMIQVSQSERDKDDFESEEEHIKSTQVPTNVGKPASVIKNMSA
KPPNPVKHNEKEMEPLEEIQKATKEVNYESSQHDAKSSKSLMSNEKGKNKDWDHSLSDKD
TSEKSSVQQEKDHSECATERGNRKNISQSSKDSRSEKHDIGPGSTAKDFGPNHVKKSDHN
GNRDHSSSKCRDEKSEFARIKDSPSGNRESTSVQKSKPRDEPAEPSEKGAGDAKRSRYSP
PRQWKQSDHKAAPDYKRTLEQHKPLAKTPGKETEKHVPEVKSEKEKEPGGNIPPLRQEAL
DVKNENVTSRNDPSVVKPEPQVSSSSQLSSDITQDTDEAAFVPDYDESDSDSNGSATDEN
AAGENPKELSEKAVDKVKEDPAAPAAVGQPEGSRSQSSLSVGPSHSQSPSEHHTQSHSSS
ASPGEGQDTKKSEKEKQQRKKKEKHKKQKKHIESKMELEKSHKHKKKKLKKGKDKEKDDQ
KVKSATI
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgccgggcccgcccaggccccggaccggagagcggggaccggagagcggggac
cagggaccggagaggggaccccacggcggcagcaccacgttgcggttacctacaggaacc
accgccccgcaaccagcatctcccgggctggtaccagcgccctgggaccgtcatctctgc
cccgtcctgatgctgacagccccaccgccggcatccctgccaccctccggaaccggcatc
acggaatcccagaatgtcaggagcagcggtgcccgagccgccagctgcgcctgggagcgc
tgcgggccagagttgaggccgcaggcgcctttccctcctgtccgcccgcccgggctgtgg
gctcgggctcagccggcaccgcttgccccaaccccctcggtggacccttccccctgtcgc
cgtggggacaaacccggcgtgggggacacaacgccgtttgccacagtcgacgctgccacg
gagcagcaccacctggccatggccgcgtcacatgtctactacaagtttttctccaacctg
aactacgatgtggccaccttccacggcctccatatctccctgcgcgagctcaagcgccag
atcatgcgccgcaagaagttgaagccgacaaactgtgacctgctggtcaccaacgcacag
accaaagaagaatacacagatgataatgccctgattccaaagaactcatcggtaattgtt
agaagaatccctgctgaaagagttaaagctaccagcaaaacatatgttataactcctaag
tcacacaaaatcctacaaagtgctttcagacgtcatttctaaagtcgaactgaaccagtg
agtggaccgtcaaaagccattgatgactcttctgcacctatttctctggcccaacttatt
aaggctgccaatgtggctgaaaccaatgcttccgaagaagagaaaataaaggctatgaca
cagtcctgccaggaatacgatccagtcaatttcatgaagaaaaacttgggcccgcttcca
tcatcatacacttgctttcgttgtggaaaacctggccactatataaagaactgcccaact
aacagggacaaaaattttgagtctgttcccagaattaaaaagagcacaggaattccaagg
agtttcctgatggaagtgaaagatcccaataccaagggtgctatgctgacaaacactgga
agatatgcaataccaactattaatgcggaagcttatgcgagaggaaagaaggaaaagcct
ccctttttaccagcggagccaccctcctcctcctccttcgcagatgatgattctgttcca
gatgagttgttatgtctcatttgtaaagatatagtgactgatgcagttgttattccctgc
tgtggaaacagttattgtgatgaatgtattagaacggcattactggaatctaaggagcat
acatgtccaatgtgtcatcaaacagacgtttctcctgatggtttagttgccaacaaaatc
ctacgccaggctgtgaacaacttcagaaatggaactggctacagcaaacagattcagcag
cagcagcagcaccagctgccaccaccactaatgagagaaacaataacacgcaacctgcaa
cctccactccggccaacaatttccagacagaaggatccactaattactccatcagcttct
ctgtcttctcattctgctgctttgtcgtcgtttggccctactcaggcatctgcggcagct
gagcggccaggaattctgccttctgtcattgtctctgatgccccaccagcagtctccctg
cccttccgtgccgaaaagccaggtggaccttttcgtgaggctgatgcagttatacctcct
gctgctctggtgactgccgctgagcttcctaaatcttcctctctgacaatcagcagtttg
ttggaagagcagggctatcaggttcctgtactaagacaaccagcactgacaagtcttctg
agcccccaaggacaatcaatacccccaactggtcggccaatgagagccagtacaatttgg
ccagcacgtgggagaccaggctgggaaccttcaaatcaaggatgcctgcacagtgaacat
acccaaaggactcaggccccaacanccgcaacaccaccagtctccatgcccatgcctcca
cctcccttgtgtcttccagcaccccacacgcttccttttccagcaatggtggcatcacca
cagtttcctcctcaatctccacctggtcaccctcgacgtgctgggtgcactgtctccctt
ccagggcattccccagctcctgaaaacatgccatcagcttgggtaccaacaaataccacc
ccaaggacacaagcacctcctttatctagggaggagttttacagagaataacagagacat
aaagaggaggagaaaaagaagtccaaacttgatgaatttacgaatgattttgctaaggaa
ttgatggaatataaaaggattcaaaaggagcacaggcgtttgttttccaggtccaggtct
ccctgtgatgcttcatcttactctagaagttcatatacctactccaagtcaagatcaggc
tcttcccactctcgcacctactctcgatcatttagtcattcccagtctcgttcctcgtcc
cgatcaccaccgtatctaagaagaggcaaagtgaacagtcgtgaccatcattctagttca
aggtcacattgttattaccattcaaggtctcgcccatgcagaagatgccgttcacggtca
aggtctccactacttagaggccagtctcacgctaaagggactatacctcaaggggaagga
gaaagggagtattttaacagacacgcagaagttccggcatataatatgaaagattactat
ggcagacctgttgacttcagagatccatttgaaaatgaaagatacagagaatgggaaagg
aactatagagaatggtatggaaagttttacaagggctgtgctgttggtgctcaacctcca
cctgcagtaaatagagagaacttttctcctgagaggtttggtccacctgagaccagacaa
gagaactcaccatatgcttggggaaacagggaggattatcctggtgggcagagccacaga
agtcataacgtaagtggagattactgtgaaaaaccttctggaagagagaggcatggcatc
agtgatcctagaaaatcaaaagagaaagaagtgaaatatccatggggagatggcaaagga
aataaatatgaaagacaccagaagagaagaaaatgcaatgagaatgaaggatttcccagt
gctgaattgttagaaggtgcaagaaaaccaagagagccagttacagcaggagacgataaa
acagactccctgttcatgctcccaagcagagatgatgccacccctgtaagagatgagcct
atggaaatagattcgattgctttcaaaccagtgtctgaagaggagagaacagaggaggat
aagccaaaagaaaaaaatgacaacacaaagtggaaagtagaagtggctgttcctcctaag
aaagacgacataataataccagctaaaacttcccaagagacggtggacaccgattgtgaa
aattctcctcaaatggaacctcctgcgaaaaaagtgaaggaggagttgccaaagacagac
aacgttataatatcttcctctcaaaaggatgagaaggctcctggtactccatggaaattt
cacccagaagtgacaaaagatcacctagaaaccagaacagccaaggatgaaaaggtgaag
aaagaccatccaaaagaaaccaaatcagagaagccctccaaagaggacaagtcaaaaaat
gtggaaaaaagcaaaacttctgatgcaaaacctgaaaaaagcaaaggaaaagtagatgaa
gaggtggttaaggaacatgaagccacttccatagatgcctcaaaaccagaaactgctgaa
tggaaaacatcgccaaagggaaagactgagtttgatgctgaaaaaggagagctaactccc
gaaaaagacaaatctgcatttcttaaccaacccgcaaaaaagattgaactcaaccaagaa
actggcaaaaagattgtgagcggagaaaatgtgcctcctgcaaaagaacttgttgagaaa
cccaaggcaagcagcagcaatgttaaacaggaaaaagcgaagggggaagtgcaaataaaa
gtaacagcagctgatggatctagttcagttcttgtagattacaccagcagtagttctact
gagggaaggcccgttacaaagactgaagaaaatccagatacaaaacaaactatcattaag
accatggaggagtataataatgatattacagcccctgcagaagatgtcatccttatgatc
caagtctctcagtcagagcgggataaagatgactttgagtctgaagaggaacacattaaa
tctacccaggtgcccacaaatgtaggaaaacctgcaagtgttataaaaaatatgagtgct
aagccgccaaaccctgtaaaacacaatgaaaaagagatggagcctttggaggaaatacag
aaagctacaaaagaggtgaattatgaaagctcccaacatgatgcaaaaagttcaaaaagt
ttaatgtcaaatgaaaaaggaaaaaacaaagactgggatcattccctgtcagacaaggac
acttctgaaaagagcagtgtgcagcaagaaaaagaccactcagaatgtgcaactgaacga
ggaaacagaaaaaatatttctcagtcttccaaagacagcagatcagagaaacatgatatt
ggccctggatccactgctaaagactttggtcctaaccatgtcaaaaaatctgaccacaat
ggcaacagagatcattccagttccaaatgtagagatgaaaagagtgaatttgcaaggata
aaagactctccttctggaaacagagaatctacctcagtacagaaaagtaagccaagagat
gaaccagcagagccatccgaaaaaggcgctggggatgccaaaaggagcagatacagccct
ccacgccagtggaagcaatctgatcacaaagctgctcctgattacaagcgtacattggag
caacacaaacctctagctaaaactccaggaaaagagacagagaagcatgtaccagaagta
aagagcgaaaaagagaaagagccaggtggtaatataccacctttgagacaagaagcccta
gatgtaaaaaatgagaatgtgactagtcgaaacgatccaagtgttgtcaagcccgagcct
caggtaagcagctcctcacagctctcttctgacataactcaagacactgatgaggctgca
tttgtaccagactacgacgaaagtgacagtgacagtaatggatccgcaacggatgagaac
gctgcaggagaaaatcctaaagaactatcagaaaaagctgttgacaaggtgaaagaggat
ccagcagcacctgctgcagttgggcagcctgaaggaagcagaagtcaaagcagcctcagt
gttggccccagccacagtcaaagcccttctgagcatcacactcaaagccacagcagcagt
gccagcccaggagagggtcaagacaccaagaaaagtgaaaaagagaagcagcagcgcaag
aagaaggaaaagcacaagaagcagaagaaacacattgaaagcaaaatggaattggaaaag
agccacaaacacaagaagaaaaaactgaagaagggcaaagataaagagaaagatgaccaa
aaagtgaaatctgctacaatatag
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integrated database retrieval system
