Caloenas nicobarica (Nicobar pigeon): 135994245
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Entry
135994245 CDS
T11056
Symbol
ERCC4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03420
Nucleotide excision repair
cnic03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
135994245 (ERCC4)
03460 Fanconi anemia pathway
135994245 (ERCC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnic03032
]
135994245 (ERCC4)
03400 DNA repair and recombination proteins [BR:
cnic03400
]
135994245 (ERCC4)
DNA replication proteins [BR:
cnic03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
135994245 (ERCC4)
DNA repair and recombination proteins [BR:
cnic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
135994245 (ERCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Motif
Other DBs
NCBI-GeneID:
135994245
NCBI-ProteinID:
XP_065500748
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All DBs
Position
14:complement(17005531..17022023)
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AA seq
903 aa
AA seq
DB search
MAALLEHESQIFLELFHRDGLLVCARGLGVDRLLLRFLRLYCEPASLVLVLNTGPAEEEY
FIDQLRSDGVVHLPRRVTNEITNNTRYEFYTQGGVFFATSRILVVDFLTDRIPANLITGI
LVYKAHRIIESCQEAFILRLYRQKNKEGFIKAFTDNAVAFNTGFCQVERVMRNLFVSKLY
LWPRFHVAVNSFLEKHKPEVVEIHVSMTPAMLAIQTSILDILNACLRELKRYNPALEVED
LSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLLYLTQYDCITFLNLLE
SLKASEKAFGENSGWLFLDSSTSMFVNARARVYRIADEKLNQKGKVPEKSDVKKENELKR
ELVLESNPKWEALREVLKEIENENKNSEDLGGPGQVLICASDDRACAQLREYIIAGAEAF
LTRLYNKTFGKDEKAAEVWIADRKAIKSKGNARPDTGPQAKKAKLAASSKQNKNKKQQDQ
TIIQMIGKAEEEKREELEAEDNKQLSSSPENNTEETVPEDFHVNLPSDCYYGIFKDPLTI
IHPLQGCTDPYALTRVLHEVEPRYVVLYDAELSFVRQLEIYKASRPGKPLRVYFLIYGGS
TEEQRYLTALRKEKEAFEKLIREKAGMVIPEEREGRDETNLDLTRDAKPASAAADTRKAG
GQEQKSVQQTVIVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSISDLI
GSLNNGRLYAQCVSMSRYYKRPILLIEFDPNKSFSLIPRGSLHQEISSNDVTSKLTLLTL
HFPKLRILWCPSPHATAELFEELKENHPQPDAETAMAITADSEVLPESDKYNPGPQDFLL
KMPGVNAKNCRALMNHVKSIAELVTLSKDELAKILGNAANATQLFDFIHLTYGEAMAKGK
SKR
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctgctggagcacgagagccagatcttcctggagctgttccaccgcgacggg
ctgctcgtctgcgcccgcgggctcggcgtcgaccgcctgctgctgcgcttcctgcgcctc
tactgcgagcccgccagcctggtgctggtgctcaacaccggccccgccgaggaggagtat
tttatcgatcagctgaggtcagacggagttgttcatcttcctcggcgtgttaccaatgaa
attacaaacaatactcgatatgaattttacacacaaggaggagtcttctttgcaacaagt
cgaatccttgtggtagatttccttaccgacagaattcctgcaaacctcattaccggcatt
ttggtatacaaagcgcacagaatcattgagtcctgtcaggaagcatttattttgcgactt
taccgccagaagaataaggaaggcttcattaaagcttttacagataacgcggttgcattt
aacactggcttttgccaggtggaaagagtgatgagaaatctttttgtcagcaaactttat
ctgtggccaagatttcatgtagcggtgaactcatttttagagaagcataaacctgaagtg
gtggaaatccatgtgtcgatgactcctgctatgcttgctatccagacttcaatcctggac
attttgaacgcgtgcctgagagaactcaaacgttacaatccagctcttgaagtagaagat
ctatctttagaaaatgctattggtaaaccttttgacaagacaatacgtcactatttagat
cctctctggcatcagcttggagctaagacaaaatctttggtccaggatttgaagatacta
cgtactttgctactgtacctaactcagtatgattgcatcactttccttaatcttctggag
tcactgaaagcaagtgaaaaagcttttggtgaaaattcaggttggctgtttcttgactcc
agtacttcaatgtttgtcaatgctcgagctagagtttatcgcattgcagatgagaaactg
aatcagaaaggcaaagtccctgaaaaaagtgatgtaaagaaggaaaatgaactgaaaagg
gaactggttctagaaagtaaccccaaatgggaagctttgagagaagtactgaaagagatt
gaaaatgagaataagaacagtgaagaccttggtggtccagggcaagtgcttatttgtgcc
agtgatgaccgagcttgtgcacagctcagggagtatattattgctggagcagaagctttt
ttaacaagactgtataataaaaccttcggaaaggatgagaaagctgcagaagtgtggatt
gcggacagaaaagccatcaagtccaaaggaaacgccagaccagacactgggcctcaagcc
aagaaagccaagctcgccgcttcttcaaaacaaaataaaaacaagaaacagcaagaccag
actataatccaaatgatagggaaagctgaggaggaaaagagagaggagttagaggcagaa
gacaacaaacaattaagcagtagcccagaaaataatactgaagagaccgttcctgaagat
ttccatgtgaacttaccctcggattgttactatggtattttcaaggacccactgacaatt
attcatccgttgcagggttgcactgatccctatgcactcactcgggtactgcacgaagta
gaaccaagatacgttgtgttatatgatgcagaactgagttttgttcggcagctggagatc
tacaaggcaagcaggcctgggaagcctttgagggtttatttcctcatatatgggggctca
acagaagaacagcgctatctcacagctctgaggaaagagaaggaggcctttgaaaaactc
attcgagagaaggctggcatggttattcctgaagaaagagaaggaagagatgaaacaaac
ttggacctaaccagagatgctaaacctgcctctgctgctgctgacacgcgcaaagcaggt
ggacaggagcagaagagtgttcagcaaactgtaatagtggatatgcgggaattccggagt
gagcttccatcactgattcatcgtcgtggtatcgacatcgagccggtcactttggaggtt
ggagattatattttaactcctgatatctgtgtagagcggaagagtatcagtgatctgatt
ggttccttaaacaacggcaggctgtacgcacaatgcgtttctatgtcccgttactataag
cgaccaatcctcctgattgaatttgatcctaacaaatccttctccttgattccacgaggc
tctctgcatcaggaaatttccagtaatgatgttacttctaaactaactcttctaacgctc
catttcccgaagttacggatcctgtggtgtccctctccccacgctactgctgaactgttt
gaagagttaaaagaaaaccatccccaacccgacgcagaaacagcaatggccatcacggca
gattctgaagttcttcccgagtcagacaagtataaccccggtcctcaggactttctgtta
aaaatgccaggtgttaatgcaaaaaactgccgtgccttaatgaaccacgttaaaagcatt
gcagagctagtgacgctgtcaaaggacgaactcgccaaaattttgggtaatgctgcaaat
gccacgcaactctttgactttattcacctgacctacggagaggcaatggctaaaggaaaa
agcaaaaggtga
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