Caloenas nicobarica (Nicobar pigeon): 135994255
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Entry
135994255 CDS
T11056
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03015
mRNA surveillance pathway
cnic05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
135994255 (CPSF4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
135994255 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnic03021
]
135994255 (CPSF4)
03019 Messenger RNA biogenesis [BR:
cnic03019
]
135994255 (CPSF4)
Transcription machinery [BR:
cnic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
135994255 (CPSF4)
Messenger RNA biogenesis [BR:
cnic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
135994255 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-C3H1
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
135994255
NCBI-ProteinID:
XP_065500762
LinkDB
All DBs
Position
14:complement(3541562..3548343)
Genome browser
AA seq
243 aa
AA seq
DB search
MQELIASVDHIKFDLEVAVEQQLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPTCKFMHPRFELPMGTTEQPP
LPQPTQTQQKRTPQVIGVMQSQNNNTGNRGPRPLEQVTCYKCGEKGHYANRCTKGHLAFL
SGQ
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctcatcgccagcgtggaccacatcaagttcgacctggaggtggccgtggag
cagcagctgggggcgcagccgctgcccttccccggcatggacaaatcaggtgcagctgtc
tgtgaattttttttaaaagcggcctgtggaaaaggaggcatgtgcccgttccgacacatc
agcggggaaaagacagttgtttgcaaacactggctacgaggactgtgcaaaaagggagac
cagtgcgagtttctgcacgagtacgacatgaccaagatgcctgagtgttacttctactcc
aaatttggggaatgcagtaacaaagaatgtccgtttttgcacatcgacccggaatctaag
atcaaagactgtccctggtatgacagaggcttctgtaaacatggtcccctctgcagacac
cggcacactcgaagagtcatttgtgtgaattaccttgtaggattctgtccggaggggccc
acctgtaaattcatgcacccacggtttgaactgccaatgggaaccacagagcaaccaccg
ctgcctcaaccgacacagacccagcaaaagagaacacctcaagtcattggagtcatgcag
tcgcaaaataacaacactgggaacagaggaccccggccgctggagcaggtcacctgctac
aagtgtggtgaaaaaggtcattatgccaacagatgcaccaaaggacatctggcctttctc
agtgggcagtga
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integrated database retrieval system
