Caloenas nicobarica (Nicobar pigeon): 135994271
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Entry
135994271 CDS
T11056
Symbol
ARPC1B
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04144
Endocytosis
cnic04517
IgSF CAM signaling
cnic04530
Tight junction
cnic04810
Regulation of actin cytoskeleton
cnic05100
Bacterial invasion of epithelial cells
cnic05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
135994271 (ARPC1B)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135994271 (ARPC1B)
09144 Cellular community - eukaryotes
04530 Tight junction
135994271 (ARPC1B)
09142 Cell motility
04810 Regulation of actin cytoskeleton
135994271 (ARPC1B)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135994271 (ARPC1B)
05100 Bacterial invasion of epithelial cells
135994271 (ARPC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135994271 (ARPC1B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cnic04812
]
135994271 (ARPC1B)
Membrane trafficking [BR:
cnic04131
]
Others
Actin-binding proteins
Arp2/3 complex
135994271 (ARPC1B)
Cytoskeleton proteins [BR:
cnic04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
135994271 (ARPC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
Beta-prop_Aladin
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_HPS5
eIF2A
EIF3I
PEP5_VPS11_N
RMC1_N
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
GD_N
Motif
Other DBs
NCBI-GeneID:
135994271
NCBI-ProteinID:
XP_065500783
LinkDB
All DBs
Position
14:complement(3565487..3573834)
Genome browser
AA seq
369 aa
AA seq
DB search
MAYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIYRKDGARWSKVHELKEHNGQVTGIDW
APESNRLVTCGTDRNAYVWTLKGNVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRIFSAYIKEVEERP
SPTPWGSKMPFGELMFESSSSCGWVHSICFSASGTRVAWVSHDSTLCLADASKKMAVASL
CTETLPLLAVTFITENSLVAAGHDCCPMLFTYEESQGTLTFGGKLDVPKQSSQRGLTARE
RFQNLDKKASSDTVNASLDTLHKNSISQISVLAGGKANCSQFCTTGMDGGMSIWDVKSLE
SALKDLKIK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcctaccacagcttcctgctggagcccatcagctgccacgcctggaataaggaccgg
acccagatcgccctctgccccaacaaccatgaggtccacatctaccgcaaggacggggcc
aggtggagcaaagtccatgagctgaaggagcacaatgggcaggtgacaggcattgactgg
gcccctgagagcaaccggctggtgacatgtgggactgaccgcaatgcctacgtctggacc
ctgaagggcaacgtctggaaacccaccctggtcatcctgcggatcaaccgggccgcccgc
tgcgtcaagtggtcccccaaggagaacaagtttgctgtgggcagcggctcccggctcatc
tccatctgctactttgagcaggagaatgactggtgggtgtgcaagcacatcaagaagccc
atccgctcgacggtgctcagcctcgactggcaccccaacaatgtcctcctggccgccggc
tcctgcgacttcaagtgccggatcttctcagcctacatcaaggaggtggaggagcggccc
agccccacgccctggggctccaagatgcccttcggggagctgatgttcgagtcgagcagc
agctgcgggtgggtgcacagcatctgcttctcggccagcggcacccgcgtggcctgggtg
agccacgacagcaccctctgcctcgccgacgccagcaagaagatggctgtcgcctccctg
tgcacggagaccctgcccctcctggctgtcaccttcatcaccgaaaacagcctggtggcc
gcgggccacgactgctgcccaatgctgttcacctacgaggagagccagggcacactgacc
ttcggggggaagctggacgtccccaagcagagctcccaacgcggcctcaccgcccgcgag
cgcttccagaacctggacaagaaagcgagctcggacaccgtcaacgcctcgctggacacc
ctgcataagaacagcatcagccagatctcggtgctggcaggcgggaaggccaactgctcg
cagttctgcaccacggggatggacggcggcatgagcatctgggatgtcaagagcctggaa
tcagcactgaaggatctcaagatcaaatga
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integrated database retrieval system
