Caloenas nicobarica (Nicobar pigeon): 135994421
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Entry
135994421 CDS
T11056
Symbol
NLRC3
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cnic04054
]
135994421 (NLRC3)
Pattern recognition receptors [BR:
cnic04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
135994421 (NLRC3)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
NACHT
NLRC4_HD2
NOD2_WH
LRR_8
LRR_4
FISNA
DUF5474
LRR_12
Motif
Other DBs
NCBI-GeneID:
135994421
NCBI-ProteinID:
XP_065501019
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All DBs
Position
14:complement(10474590..10483965)
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AA seq
1062 aa
AA seq
DB search
MSREASDGRGLDQPLPQAAGEVHLTTVPGGDHLLPAEAGPPHGGGGQPGAGGELPARAEP
VVQKHLESLQSYYGNGLDTGPLQRLTNLLLVEGLTDIQQKEHDILQIEATKGLRSVSKSI
SLEKLFLPLSKLSIPPRISVTIGVAGIGKSTLVKLFVYTWAKGEINRDIIFVLPLTFREL
NTYEKLSAERLICLAFPHIAEPNCISAGAARTLLILDGLDEFKTPLDFSNTVVCTDPKKE
IQVDNLITNIIRGNLLQEASVWVTSRPTAASQIPGGLVDRMTEIRGFRAAEMKDFLDQMF
LDNRDLSSQVLHHIRANRSLHILCTVPGFCWIYGSSIGYYLKNSTNQSQETTVVPRTLSE
IYSYYFKMALSNDWPEKPRETLRIEQAVNNSKKIVGSLGRLAFYGLLKKKYVFYEQDMKA
YGIDLALLQSSLCSRLLLKEETPSFTAYCFSHLTIQEFLAAIYYYTAAKRAIFDLFTESG
MSWPKLGFLSHFKSAVQRSLQAEDRQLDVFVRFLSGLLSPQVNKLLSGWLLVKDEHNSFR
NQAISFLQGCLNTDYVISLRTVNTVHCLYEIQHMEIAKAVEEAMKNESLAGMLTPVNCSA
LAYLLQVSDVCVEETNLSSCLTYNVCKSLLPQLLFCQNLRLDNNQFKDNVMELLGSMLSV
KDCQIQKLSLAENQISNKGAKALARSLMVNRSLTVLDLRSNSIGPTGAKALADALKKNQV
LLSLNLQHNVIKEDGATFLAEALLTNHRLMTLHLQKNAIGAHGARKIAEALKQNCSLKEL
TLSSNAVGDNGSVALAEALKVNHSLQSLDLQSNSISSAGVMALTLALCTNKGLISLNLRE
NSISKDGGPAIARALRINSTLRKLDLAANLLYDEGGKAIALAMKENQALTSLHLQWNFIQ
AKAATALAQALQSNSSLATLDLQENAIGDEGMAALSTALKVNTTLSDLHLQVASVGATGA
QALAEALMVNKSLQILDLRGNSIGVAGAKAMANALKVNRSLRWLNLQENSLGMDGAICIA
TALKGNHGLTYVNLQGNRIGQSGAKMISDAIRTNSPDCVVDV
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgggaggcctctgatggaagaggcttggatcaaccgctaccgcaagcagctggt
gaggtccatctcaccacagttcctggaggagatcatctgctacctgcggaggctggacct
cctcacggcggaggaggccagccgggcgcaggaggcgagctccctgcccgagcagaacct
gtggtgcagaagcacctggagagcctccaaagctactatgggaacggcttggacacgggt
cccctccagcgactcacgaacctgctgctggtggaaggcttgaccgatatccagcagaag
gagcatgacatcctgcagattgaagccaccaaaggcctacgaagtgtatctaagagcatc
tctctggagaagctcttcctgcctctctccaagctcagcatcccacctcggatctctgtc
accatcggagtggccgggattggcaaaagcacccttgtgaagctgtttgtctacacctgg
gcaaaaggggagatcaacagggacatcatctttgtgctgcccctcaccttccgggagctc
aacacctatgagaagctctctgctgagaggctcatctgcttggcgttccctcacatcgct
gagcctaactgcatctcggcaggagctgccaggaccctcctgatcctcgacggcttggat
gagttcaaaacgcctttggatttttccaacacggtagtatgcaccgaccccaaaaaggag
atccaagtggacaacctgatcaccaacattatacgtggcaacctgctgcaggaggcttct
gtctgggtcacgtcgcggccaacagcagccagccaaatccccggcgggcttgttgaccgg
atgacagaaatacgaggttttagagcagcagagatgaaggacttcttggaccagatgttc
cttgacaacagagacctgtccagccaagtcctgcatcacatcagggctaacaggtcatta
cacatcctgtgcaccgttcctggcttttgctggatttatggctcctcaatcggttattac
ctaaaaaatagcacaaatcaatcccaagaaacaaccgttgtgcctaggaccctatcagaa
atctactcctattattttaaaatggctctgagcaacgactggccagaaaagccaagagaa
acgctcaggatcgagcaggctgtgaacaatagcaagaagatagtgggcagcctgggcaga
ctggccttctatgggctgctcaaaaagaaatatgtgttttacgagcaggacatgaaggcg
tacggcattgaccttgccttgctgcagagcagcttgtgcagtcgcctcctgctcaaagaa
gagacaccatccttcacagcctactgcttctcccacttaaccatacaggagtttctagcg
gctatttattattacacggctgccaagcgggcaatatttgacctcttcactgagagcggg
atgtcctggcccaagttggggttcctcagccacttcaagagcgctgttcagaggtcactg
caggcagaggacaggcaactggacgtctttgtgcgttttctctccgggctcctttccccg
caggtgaacaagctgctctctgggtggctgttggtgaaggacgagcacaacagcttcagg
aaccaagcgatcagcttcctccagggctgcctgaacaccgactatgtcatctccttgcgg
acggtgaacaccgtgcactgcctgtatgaaattcagcacatggagatcgctaaggctgtg
gaagaagcaatgaagaacgagagcctggccgggatgctcacccctgtgaactgctctgcc
ctggcttatctcctgcaggtctctgatgtctgcgtggaggagacgaacctttccagctgc
ctcacctacaacgtctgtaagagcctgctcccccagctcctcttctgccagaacctcagg
ctggacaataatcagttcaaggacaacgtgatggagctgctgggcagcatgctgagcgtg
aaggactgccagatccagaagctcagcttggcagaaaatcagatcagcaataaaggagcc
aaagcactggccaggtcgttgatggtgaacaggagcctgacagtgctggacctgcggagc
aactccatcggccccactggagcaaaagcactggctgacgcgctgaaaaaaaatcaagtc
ctgctctccctgaacctgcagcacaacgtcatcaaggaggatggtgccaccttcctggct
gaggccctgttgaccaaccacaggctgatgaccctgcacctgcagaagaacgccatcgga
gcccacggtgccaggaaaatcgccgaggcgctgaagcagaactgcagcctgaaggagctg
acactctccagcaacgcagtaggagacaatggctcagtggccttggcggaagctctgaag
gtgaaccacagtctgcaaagcctcgatctccagagcaactccatcagcagcgctggggtc
atggcgctgacactggctctctgcaccaacaagggactcatcagcctcaacctgcgggag
aactccatcagcaaggacgggggccctgccatcgcccgcgccctgcgcatcaacagcacc
ctcaggaagctggacttagcggcgaacctgctgtatgacgaaggcggcaaggccatcgct
ttagcgatgaaagagaaccaggcgcttacgtccctccacttgcagtggaacttcatccag
gcaaaagctgccacggccctggcacaagcactacagtccaacagcagcctggccaccctc
gacttgcaggaaaatgccatcggagatgaggggatggctgccctttccaccgcactgaag
gtcaacacaaccctgtcagatctccacctgcaggttgcttcagttggtgcaactggtgct
caagccctggcagaggccttgatggtcaacaagagcctacagatcctggacttgcggggc
aactccattggcgtggcaggggccaaggcgatggccaacgcactgaaggtgaaccgcagc
ctccgctggctcaacctgcaggaaaactccctgggcatggacggagccatctgcattgcc
accgctctgaagggcaaccatggccttacctacgtgaacttgcaggggaaccgcatcggc
cagtcgggagccaagatgatctctgacgccatccggacaaactcgcccgactgtgtcgtg
gacgtatga
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