Caloenas nicobarica (Nicobar pigeon): 135994594
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Entry
135994594 CDS
T11056
Symbol
ABCA3
Name
(RefSeq) phospholipid-transporting ATPase ABCA3 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135994594 (ABCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnic02000
]
135994594 (ABCA3)
Transporters [BR:
cnic02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
135994594 (ABCA3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_23
RsgA_GTPase
AAA_22
AAA_30
AAA_15
Motif
Other DBs
NCBI-GeneID:
135994594
NCBI-ProteinID:
XP_065501353
LinkDB
All DBs
Position
14:9475337..9504617
Genome browser
AA seq
1727 aa
AA seq
DB search
MQEGPAERWRRQRSPSDGRMVVLRQFGLLLWKNYILQKRQILVTVIEICLPLLFAAILIA
LRHRVHSVSHPNATIYPPQSVDDLPGFFYRRRPSNPWELAYVPSDSSAVRSIAEAVERAL
PISIRAQGFASERDFEEYVKSDNRSGSVLAAVIFKHRFPQSTSPLPLQVDYKLRFKYSPR
NAPRSEQTGLNPNLDRDWHTSYLFPLFQLPGPREAKFADGGTPGYIREGFLAVQHAVDRA
IMQYHANASSTSLLENITVVVQRFPYPAYVNDLFLLAIQNQLPLLLMLSFTYTSLNIVRA
VVHEKEKKLKEYMHMMGLSNWLHWSAWFLMFFLFLLVSVFFVTVLFCVKVSEQGAVLTNS
DPTLVFTFLAIFSISSISFNFMVSTFFSRANVAAAAGGFLYFFSYIPYFFISPRYDLMSH
SQKLASCLISNVAMAMGAQLIGMFEGKGTGIQWRDLMKPVSVDDNFTLAQVLGMLLLDSV
LYGVVAWYVEAVFPGEYGVPQPWYFFLTPSYWCGRPRTVVGKEKEEEEDPEKALKSQYIE
EEPADLVSGIKIKHLSKVFKVGNKMKEAVKDLTVNMYEGQITVLLGHNGAGKTTTLSMLT
GLHSPTGGQAYINGYEISQDMVLIRRSLGLCPQHDVLFDNMTVEEHLHFYAGLKGYPPSK
CPEEINHILRILNLEDKRHSLTKALSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPASR
RATWDLLQQQRSNRTILLTTHFMDEADLLGDRIAIMAKGELQCCGSSLFLKRKYGAGYHM
VMVKEPYCNLGEISRLICQYVPNATMESNAGAELSFILPKESTHRFEALFTELEQKREEL
GIASYGASVTTMEEVFLRVGKLVDSSMDIQAIQLPALQYQHERRSNDWAMDDSSSLSGMT
DMTDDSGALITEDCSSIKLNTGFYLCCQQFYAMFMKRAMYSWRNWKMVAAQFLVPLIFTA
FALIVAKTFPGPRDSSLLRLTLEPYGQTIVPFSISAASGLSQRLAEQYVELLDAQRQSPL
EVLGGLEDYLISRASEEGGAFNEHYIAAASFEGAGNRTVVTALFNNQAYHSPATALMLAD
NAVFRVLAGPNASITVTNYPQPRNITEKAKDQLMEGQTGFAIAINLLYGMASLASTFALL
LVSERAIKAKHVQFVSGVYVVNFWLSALLWDIINFLIPCALMLVIFQAFDVQAFTQDSHL
VDVMLIFLLYGWAIIPLMYLLSFLFSVAATAYTRLTIFNILSGTATFLAVTIMSIPELGL
MDLSKTLDKVFLVLPNYCLGQCISDFYQNYEFIQFCTSSVEAIFICKAFNISYQMNYFSW
ETPGIGRYLTSLSIQGFSFLFLLFLIETNLLWRLRTLVCGICRRRKWVALLNRVSVLPED
RDVADERKKVLESPPELLSSLSSPLVIKELTKVYDSRESLLAVDRISLAVSKGECFGLLG
FNGAGKTTTFKMLTGDESITSGDAFVDGHSILANIKKVQQRIGYCPQFDALLDHMTGRET
LSMYARLRGIPERYIGSCVENMLRGLLLEPHADKLVRAYSGGNKRKLSAGIALIGGPPVI
FLDEPSTGMDPVARRLLWDAVTRTRECGKSIIFTSHSMEECEALCTRLAIMVNGQFKCLG
SPQHLKSKFGSGYTLLAKTRSEEEGELQAFKAFMEKTFPGSVLKHEHQGMVHYHLTNKNL
SWAQVFGALEKAKEKYRLEDYSVSQISLEQVFMSFTRFQHYTEDRGK
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagggtcctgcggagcggtggcggcggcagcggtccccttctgatgggaggatg
gttgttctcaggcagtttgggctgctgctgtggaagaactacatcttgcagaaacggcag
attttggtgacagtcatcgaaatctgcctgccgctgctctttgctgccatcctgatagcg
ctgcggcaccgggtacactccgtcagccaccccaacgccaccatctaccccccccagtct
gtggatgacctgccgggcttcttctaccgccggcgccccagcaacccctgggagctggcg
tacgtcccctccgacagcagcgccgtcaggagcatcgccgaggcggtggagagagcttta
cccatcagcatcagagcccagggctttgcctcagagagggactttgaggagtatgtcaag
tcggacaaccgctcgggcagcgtgctggccgccgtcatcttcaagcaccgcttcccgcag
agcacatccccgctccccctccaggtcgactacaagctgcgcttcaagtacagcccgagg
aacgcaccgcggagcgagcagacaggtctgaaccccaacctggaccgggactggcacacc
agttacctcttcccgctcttccagctgcctgggccccgcgaggccaaatttgccgatgga
gggacgccgggctatatccgagaaggtttcctggcggtgcagcacgcggtggacagagcc
atcatgcagtaccacgccaacgccagctccaccagcctgctggagaacatcacggtggtg
gtgcagcgcttcccctaccccgcctacgtcaacgacctcttcctcctcgccatccagaac
cagctgcccctgctgctcatgctcagcttcacctacacctcactcaacatcgtccgtgcc
gtcgtacatgagaaagagaagaagctgaaggagtacatgcacatgatgggcctcagcaac
tggttgcactggagcgcctggttcctcatgttcttcctcttcctcctggtgtctgtgttt
ttcgtcaccgtgctcttctgtgtcaaggtgagcgaacagggagcagtgctcaccaacagt
gaccccacgctggtgttcaccttccttgctatcttctccatctcctccatctccttcaac
ttcatggtgagcaccttcttctcgagagcaaacgtcgcggctgccgctggcggcttcctc
tactttttctcctacatcccttacttcttcatctcgccccgctatgacctgatgtcccac
agccagaagctggcgtcctgcctcatctccaacgtggccatggccatgggggcacagctg
ataggcatgttcgaaggaaaagggactggcattcagtggagggacctcatgaagcccgtc
agcgtggatgacaacttcaccttggcccaagtgctggggatgctgctcctggattcggtg
ctctacggcgtggtggcctggtatgtggaggctgtcttccccggggagtacggcgtgcct
cagccctggtacttcttcttgacgccctcgtactggtgcgggcgccccaggactgtcgtg
ggaaaagagaaggaggaggaggaggaccctgagaaagccctgaagagccagtacattgag
gaagaacctgccgacctcgtgtcaggaatcaaaataaagcacctttccaaggtcttcaaa
gtgggaaacaagatgaaagaggcagtcaaggacctaacagtgaacatgtacgaagggcag
atcaccgtcctgctgggacacaacggcgctgggaagaccaccactctgtccatgctcaca
ggtctgcattcgccaacgggtgggcaggcgtacatcaatggctatgagatctcccaggac
atggtcctgatccgccgcagcctgggcctgtgtccccagcacgatgttctctttgacaac
atgacagtggaagaacacctccacttctacgcagggctgaaggggtacccaccatccaag
tgccccgaggagatcaaccacatcctgaggatcctcaacctggaggacaagcgccactcc
ctgaccaaggcgctttctggtggcatgaagcgcaagctctccattggcatcgccctcatt
ggggactccaaggtggtgatgctggatgagccgacgtcggggatggacccagcctctcgc
agggccacgtgggacctcctgcagcagcagaggagcaaccgcaccatcctgctgaccacc
cacttcatggatgaggctgacctgctgggggaccgcatcgctatcatggccaagggcgag
ctgcagtgctgcggctcctcgctcttcctcaagcgtaaatacggggcaggatatcacatg
gtgatggtgaaggagccctactgcaacctgggggagatctcccgcctcatctgtcagtac
gtgcccaatgccaccatggagagcaatgccggggcagagctatccttcatcctgcccaag
gagagcacacacaggtttgaggccctgttcacggagctggagcagaagcgggaagagctg
ggcatcgccagctacggcgcctcggtcaccaccatggaggaagtcttcctgagggttggg
aagctggtggactccagcatggatatccaggccatccagctacctgctctccagtaccag
cacgagagacgctccaacgattgggccatggatgactccagcagcctgagcggcatgaca
gacatgacggacgacagcggggcactcattacggaggactgctccagcatcaagctcaac
actggcttctacctgtgctgccagcagttctacgccatgttcatgaagcgagccatgtac
agctggcgcaactggaagatggtggcggcgcagttcctcgtgcctctgatctttactgcc
tttgccctcatcgtggccaagaccttcccaggaccccgggactcctccctgctgaggctg
acgctggagccctacggccagaccatcgtgcctttctccatctcagccgcctcgggtctg
tcgcagaggttggcagagcagtacgtggagctgctggacgcccagcgtcagtcaccgctg
gaggtgctcggtggcctggaggactacctcatctcaagagcctctgaggaagggggagcc
ttcaacgagcactacattgcagccgcctcctttgaaggagccgggaaccgcacggtggtc
actgcgctcttcaacaaccaggcatatcactcccccgccacggcccttatgctggccgac
aacgctgtcttcagggtactggcgggtcccaacgcctccatcacagtcaccaactaccct
cagccccgcaacatcactgagaaggccaaagaccagctcatggaaggccagaccgggttt
gccattgccatcaacttgctgtacggcatggcctcgctcgccagcacctttgctctgctg
ctggtcagcgagcgagccatcaaagccaagcacgtccagtttgtcagcggcgtctacgtg
gtcaacttctggctttctgccctgctctgggacatcatcaacttcctcatcccttgtgct
ctgatgctggtgatattccaagcctttgacgtgcaagccttcacccaagacagccacctg
gttgatgtgatgctgatcttcctcctttatggctgggccatcatccccctcatgtacctc
ctcagcttcttgttctcggtggcggccacagcctacacacgtctcaccatcttcaacatc
ctctcaggcacggccaccttccttgcagtcaccatcatgagcatcccagagctgggcttg
atggacctctccaaaaccctggataaagtctttcttgtcttacccaattactgcttgggc
caatgcatcagtgacttctaccaaaactacgagttcattcagttttgtacctcctccgtt
gaagccatcttcatctgcaaggcgttcaatatcagttatcagatgaactacttttcctgg
gagacgcctgggattggacgatacctgacctccttgagcatccagggtttctccttcctc
ttcctccttttcctcattgagacaaacctgctctggagactgagaactttggtctgtggc
atctgcaggcggcggaaatgggtggctctgctgaacagggtgtctgtgctgccagaggac
cgggacgtggcagatgagaggaagaaggttttggagtcgccaccagagctgctgtcatct
ctcagcagccctctggtcatcaaggagctcaccaaggtctatgacagccgggagtctctg
ctggcggtggacagaatctccttggcggtcagcaaaggggaatgctttggccttctcggc
ttcaacggagcaggcaaaaccacgaccttcaagatgctgactggtgacgagagcatcaca
tcgggggatgcctttgtggatggtcacagcattctggccaacatcaagaaggtccagcaa
cggatcggctactgcccgcagttcgacgccctcctggaccacatgacgggccgcgagacc
ctgagcatgtacgcccggctgcggggcatccccgagcgctacatcggcagctgtgtggag
aacatgctgagagggctgctcctggagccccatgctgacaagctcgtgagggcctacagc
ggtggtaacaagcggaagctgagcgctggcattgctctcatcggtggtccccccgtcatc
ttcctggatgagccttccaccggcatggatcccgtggcccggcgtttgctctgggacgca
gtgacacggacgcgggagtgtggcaaatccatcatcttcacctcccacagcatggaggag
tgcgaggctctgtgcacacggctggccatcatggtgaatgggcagttcaaatgcctgggc
agcccccagcacctgaaaagcaagtttggcagtggctacaccttgctggccaaaacacgg
agtgaggaggagggtgagctgcaggccttcaaggccttcatggaaaagacgttcccaggc
agcgtcctgaagcacgagcaccagggcatggtgcattatcacttgaccaacaagaacctc
agctgggcacaggtcttcggggccttggagaaagccaaagagaagtatcgcttggaagac
tattcagtgagccagatatccctggagcaggtcttcatgagcttcactcgcttccagcac
tacacagaggacagagggaaatga
DBGET
integrated database retrieval system
