Caloenas nicobarica (Nicobar pigeon): 135994691
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Entry
135994691 CDS
T11056
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cnic03041
]
135994691 (RBM39)
Spliceosome [BR:
cnic03041
]
Common components
Common spliceosomal components
General mRNP proteins
135994691 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
135994691
NCBI-ProteinID:
XP_065501547
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All DBs
Position
15:2934452..2966202
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AA seq
522 aa
AA seq
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MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRD
RERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVPPLATQCFQL
SNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAV
NALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatattgaagcaatgcttgaagctccttacaagaaggatgagaac
aaactgagcagtgccaatggccacgaggaacgcagcaagaagagaaaaaagagcaagagc
cgaagtcgaagccatgacaggaagaggagcagaagtaaggaacgcaaacggagccgagat
cgggaaaggaaaaagagcagaagccgggaaaggaaacggagcagaagcaaagaacgcaga
cgcagccgctctagaagtagagatcgcagattcagaggccgctatagaagtccctattct
ggtccaaaattcaacagtgccatcagagggaagattggtctgcctcacagcatcaaatta
agcagacgacgctccagaagcaaaagtcccttcagaaaagacaagagccctgttagagaa
cctattgataatctaactcctgaagagagggatgctcgtacagtattctgcatgcagctg
gctgcaagaattcgaccaagagacctggaagagtttttctctacagtagggaaggttcgt
gatgtgcgaatgatttcggacaggaattccagacggtcaaagggaattgcttatgtagag
tttgttgatgtcagttcagtgcctctggcgataggactgactgggcagagagtcctgggt
gtacccatcatagtacaagcatcacaggcagagaaaaacagagcagcagcaatggcaaat
aatctgcagaagggcagtgctggtcctatgaggctctatgtgggatcgttacacttcaac
atcactgaagatatgcttcgaggaatttttgagccgtttggcaggattgaaagcattcag
ctgatgatggatagtgaaactggacgctccaaaggatatggatttattacgttctcagac
tctgagtgtgccaaaaaggccttggaacaactgaatggatttgagctggctggtaggccc
atgaaagttgggcatgtaactgagcgcaccgatgcttccagtgctagttcctttttggac
agtgatgagttagaacggactggaattgacttgggaacaactggtcgccttcagttgatg
gcaagacttgcagaaggtactggtttgcagattcccccggctgcacagcaggctctgcag
atgagtggatctttggcatttggagctgtggcagatttgcaaacgagactatctcagcag
aatgaagttctggctgcagctgcttctgtaccaccacttgcgacacagtgcttccagctt
tccaacatgtttaatccccaaactgaagaagaagctggctgggatacagaaattaaagat
gatgtgattgaggaatgtaacaagcatggaggagttatccacatctatgtagacaaaaac
tcggctcagggcaacgtgtatgtcaaatgtccttcgatcgctgctgccatcgcagctgtg
aacgcgttgcatgggaggtggtttgcaggtaaaatgattacagcagcgtatgtacctctt
cccacgtaccacagcctcttcccggactccatgactgcaacccagctactggttcctgtc
cgacgatga
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