Caloenas nicobarica (Nicobar pigeon): 135994702
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Entry
135994702 CDS
T11056
Symbol
RTEL1
Name
(RefSeq) regulator of telomere elongation helicase 1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cnic03032
]
135994702 (RTEL1)
Enzymes [BR:
cnic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
135994702 (RTEL1)
DNA replication proteins [BR:
cnic03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
135994702 (RTEL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
SNF2-rel_dom
C1_2
DUF5570
zf-UDP
Motif
Other DBs
NCBI-GeneID:
135994702
NCBI-ProteinID:
XP_065501564
LinkDB
All DBs
Position
15:9358444..9400953
Genome browser
AA seq
1305 aa
AA seq
DB search
MPRITLNGIAVEFPFQPYPCQEAYMAKVLECLQKKVNGILESPTGTGKTLCLLCSTLAWR
EHFKDTISARKIAQRMNGLELFPERPVSSWGNAATDADIPAYYTDIPKIIYASRTHSQLT
QVINELKNTVYRPKICVLGSREQLCINPEVKRQESNHVQIYMCRMKVMARACHFYNNVEE
KSTEKELIESIMDIEDLVKNGNKHRACPYYLSRSLKQQADIIFMPYNYLLDSKSRRAHNL
DLKGTVVILDEAHNVEKLCEESSSFDLTPYDLASALDAINVVLEDQAKVVQQNEINAEFN
MEMMSSGLNMELEDIAKIKKILLQLESAIDAVELPPNGAGVTKEGSYIFDLFAEAQITFQ
TKSSLLESIEQILQFLSGRTGIFVNTSGLHKLSDIIQTVFNIDPPDGSTSFMPHRSISKY
YKVHIHLDSNNQKKKQRTDLWNSSSAKKQGKTLSYWCFSPGYSMHELVRQGVRTIILTSG
TLSPLSSFTMEMQIPFPVSLENPHVIDKHQLWVGIIPKGPDGTVLTSTYERRFSGDYLSS
LGKTIGNLVRVVPHGLLVFFPSYPVMDKSLEYWREHDLAKRIEEVKPMFVEPRNKGSFAE
VMDAYYDKVVCPKSNGAAFLAVCRGKASEGLDFADMNGRGVVITGLPFPPRLEPRVVLKM
QFLDELRSSGAGTQYLSGREWYSQQASRAVNQAIGRVIRHRQDYGAIFLCDHRFTTSDVR
SKLPSWVRPYVNVYDNFGHAVRSVSLFFRVAQEIMPPPLPQCPAGLATSRSKSDLAPSTS
SEQILSLQKAKNLDDHVPSLKRKRKVNGDGAPSLCMEYEQELISPRRHCIGLLDALERNE
RSSEDAEKEESDLSGEEKAQHLSTLSLQYEKRLTDEQKGGRKKIKLVSNTQAEQKADLPE
PKKARATLYIATVKETLSQQNYDLFSKALQHYKKTDDFHAMLSQMSSLFLEDEKKHVLLR
EFYQFVRPQHKKEFDEACCSLTGTGCGYKPEHSLLREERERLARNIEEKQSQQKSTFSMD
SCAQLNPGLHLNRGGFHLATELNGAGQNSGQAPRKDAEKVSSSRKDQHQVLRASYLSDVK
RALDKSTYSQFYQALLAYKKTDNYEAMVSVIAALTTERPEDFHLLQRFSMFVRPHHKERF
KELCQGLTGMGGGGEEKQLQQPVRGAGNTQSLESWGTGGENSHGQDATTSKGKAPEKIQK
ISTFCFSQKSKLELPKTKVPEETGNVRAPMGCGAVPVFPLELEPECGRFQCSNCNSEDDV
PFKCPLCDFTCCKTCWEQFLKMAKKCPKCHSDVKKQRLIQVFFWS
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggataacgctgaacggcatcgcggtggagttcccgttccagccctacccctgc
caggaggcctacatggccaaggtgctggagtgcctgcagaagaaggtaaatggcattctg
gagagccctacaggcacaggaaagaccctctgcctgctctgttccactctggcttggcga
gagcacttcaaagacacgatctcagcccgcaaaatcgcccagcgcatgaatgggctggag
ctctttcctgagagacctgtatcctcctggggcaacgctgccacagatgcagacatccca
gcttattacactgacattccgaaaataatttatgcctccagaactcactctcaacttaca
caggtcattaatgaattaaagaacacagtctacaggccgaagatctgtgtcttgggttcc
agagagcagctttgcatcaatcctgaagtgaagcgacaggagagcaaccacgtgcagatc
tacatgtgccgaatgaaagtgatggctcgtgcttgtcatttctataacaatgtggaagaa
aagagtacagagaaagaactcattgaatcaatcatggatattgaagacttggttaaaaat
gggaacaagcacagagcttgtccttattatctctctcgaagcctgaagcagcaagcagat
attatatttatgccttacaactatttactagattcaaagagccggcgagcgcacaacttg
gacctgaagggcactgtggtgatactcgacgaagctcacaatgtggagaagttgtgtgag
gagtcgtcatcttttgatttgacaccctacgacttggcgtcagcgctggatgccatcaat
gttgtactggaagaccaagccaaagtagttcaacagaatgaaataaatgcagaattcaat
atggaaatgatgagttcaggactgaacatggaacttgaagatatagcaaagataaagaaa
attcttcttcagctagaaagtgctattgatgcagtggagctgccaccgaatggtgctgga
gtcaccaaagagggaagctacatctttgatctgtttgcagaggcccaaataacattccag
accaaatcctcgctcttggagtcgatagagcagattttacagtttctttcaggccgcact
gggatatttgtcaatacatctggattgcataagctctcagacattatccagacagtattc
aacatcgatcctccagatggctcaaccagtttcatgccacatcggtcaatatctaaatat
tataaggtccatattcacttggatagcaataatcagaagaagaaacaaaggacagatctc
tggaactcatcgtctgcaaaaaaacaaggaaagaccttgagctactggtgtttcagccct
gggtacagcatgcatgagcttgttcgacagggagtcaggacaattatcctgactagtggg
actctctccccgctctcatcgtttacaatggagatgcagatcccttttcccgtttccttg
gagaatcctcatgttatcgataaacaccagctctgggttgggatcattcctaagggacct
gatggaactgtgcttacttctacctatgaaagaaggttttctggggattatttatcttct
ctggggaaaacaattggtaacctggtgcgggttgtaccgcatggactcttggtattcttc
ccatcgtatcctgtcatggataagagcctggaatattggagggagcatgatcttgctaaa
agaatagaagaagtgaagccaatgtttgtggaacccaggaacaaaggaagctttgcagag
gtaatggatgcctactatgataaagttgtctgtccgaagtccaacggagccgcatttttg
gcagtatgtcgagggaaggccagcgaaggcctggactttgccgacatgaacggccgaggt
gtcgtcatcacggggctgccgttccccccgcgcctggagccccgggtggtgctgaagatg
cagttcctggacgagctgaggagcagcggggcgggcacacagtatttgtctgggcgtgag
tggtacagccagcaagcgtcccgtgctgtcaatcaggccatcggccgcgtcatccggcat
cgccaggactacggtgccatcttcctctgtgaccacaggttcacaaccagcgatgtgagg
agcaagctgccgtcctgggttcgcccgtacgtgaacgtttatgacaacttcgggcacgct
gtcagaagcgtctccctcttcttccgtgttgctcaagaaattatgcccccacccctgccg
cagtgccctgctggcttggctacttcccgaagtaaaagtgatctggcaccatctacttca
tctgagcagatcctttccctgcaaaaagccaaaaacttggatgaccatgttcccagtttg
aagaggaaaagaaaagtaaatggagatggagcgcccagcctgtgcatggagtatgagcaa
gagctgatctcacctcgacgacattgtattgggctcctggacgcattggagcgcaacgaa
aggagcagtgaagatgcagagaaggaggagagtgacttgtcgggagaggagaaggcccaa
catctgtcaacactttcccttcagtatgagaagaggttaacagatgagcagaaaggagga
aggaagaaaataaagctggtcagcaatacacaagctgagcagaaagcagacctgccggag
cccaagaaggcccgagccacgctgtacatcgcaacggtgaaggagaccctgagccaacag
aactacgatctcttctccaaggctcttcagcactacaagaagacagatgacttccatgcc
atgttgtctcaaatgagctccctctttctggaggatgaaaaaaagcatgttttgttacga
gagttttaccagtttgttcgacctcagcataagaaggagtttgacgaggcgtgttgcagt
ctgactggcacgggctgtggctacaaacctgagcacagcctcctgcgggaggagagggag
agactcgccaggaacatcgaagaaaagcagagtcagcagaaaagcacattctcaatggac
tcgtgtgctcagctgaaccctgggcttcacctcaaccgaggaggattccacttggcaaca
gaactgaatggtgcagggcaaaattctggtcaagctccaaggaaagatgctgaaaaagtc
tcaagctcaaggaaggatcagcaccaggtcctcagggcttcctacctcagcgatgtgaaa
agggcattggacaaaagcacctacagccagttctatcaagcgttgttggcctacaagaag
acagacaactatgaggcgatggtatcggtgatcgcagccctcaccactgagaggccagaa
gactttcatctcctgcaaaggttttccatgtttgttcgccctcatcacaaagagcggttc
aaagagctgtgtcagggtttgacgggaatgggcggtggtggggaagagaagcagctgcag
cagccggtgcgaggtgcagggaacacccagagtttggagagctggggcactggaggagaa
aacagccacggacaagatgcaaccacttctaagggtaaagcaccagagaaaattcagaag
atttccactttctgctttagccagaagagcaaacttgaattgccaaagaccaaagtacca
gaagaaaccggtaacgtgagagcccccatgggctgcggagctgtgcctgtcttccccctg
gaactggagccggaatgcggaagattccagtgctctaactgcaattctgaggatgatgtg
ccttttaaatgtccattatgtgacttcacttgctgcaaaacgtgctgggagcagttctta
aagatggcgaagaagtgcccaaagtgccacagtgatgtgaagaagcagcgattaatccaa
gttttcttctggtcataa
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