Caloenas nicobarica (Nicobar pigeon): 135994720
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Entry
135994720 CDS
T11056
Symbol
NELFCD
Name
(RefSeq) negative elongation factor C/D isoform X1
KO
K15181
negative elongation factor C/D
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
135994720 (NELFCD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnic03021
]
135994720 (NELFCD)
Transcription machinery [BR:
cnic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
135994720 (NELFCD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
135994720
NCBI-ProteinID:
XP_065501589
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Position
15:complement(12809293..12818860)
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AA seq
591 aa
AA seq
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MEDADYFEGSAAEWGNEADGGAQDDEDGEGEDDAEVQQECLKKFSTPDYIMEPSIFNTLK
RYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHLKSLLIKHF
DPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGE
ITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAIFGCVLSQKMVCHGEHTYL
FAQSMMSILAQEEQGGSAVRRIAQEVQRYAHEKGHDASQITLALGTAASYPRACQALGAM
LSKGALNPADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHI
LAYAASVVEMWKKNKRVSINKDELKSTSKAIETVHNLCCNENKGASELVAELSTLYQCIR
FPVVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLIKLFET
EHSQLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDISLIRYFVTEVLD
VIAPPYTSDFVQLFLPILENESIAGTIKTEGEHDPVTEFIAHCKSNFIMMN
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgccgattacttcgaaggcagcgcggcggagtgggggaacgaggcggacggg
ggagcgcaggacgatgaggatggggagggagaagatgatgccgaagtccagcaagaatgc
ctgaagaaattttcaactcctgactatataatggagccgtctatatttaacacgttaaag
aggtatttccaagcaggaggttctccagagaatgttatccagctcctctctgaaaactac
actgcagtggcacagactgtaaatttgctggcagagtggctcattcaaacaggtgttgag
ccagtgcaagttcaggagactgtagaaaaccatttaaagagcttacttatcaagcatttt
gaccctcggaaagcagattccatctttacagaggaaggagagactccagcctggcttgag
cagatgatagcacatactacatggagggatctcttttacaagttggcagaggcccatccc
gactgtttaatgctgaattttactgtgaagcttatatctgatgctggatatcaaggggaa
ataaccagcgtttcaacagcgtgtcagcagctggaagtattttccagagtcctgcgtaca
tctctggcaacaattttagatggaggagaagaaaaccttgaaaaaaacctccctgagttt
gctatttttgggtgtgtgctttcacagaagatggtgtgccatggggaacacacatatctt
tttgctcagtctatgatgtccatattagctcaggaagagcaaggagggtcggctgtcaga
cggattgcccaggaggttcagcgatatgcgcatgagaaaggccatgatgccagtcagatc
accttagcgctgggcactgcagcctcctatcctcgagcatgtcaggctcttggtgcaatg
ttgtccaaaggagctctgaatccagcagatatcactgtcctcttcaaaatgttcacaagc
atggacccacctccagtagaactgattcgagtacctgcctttctggacctattcatgcag
tcattgtttaagccaggtgctaagatcaaccaggaccacaagcataaatatattcacata
ctggcatatgcagctagtgtagtagagatgtggaaaaagaacaagagagtcagcataaac
aaggatgaactcaagtcaacttcaaaagccattgaaactgttcacaatctgtgttgcaat
gagaacaaaggggcatcagagctggttgcagaactgagcactctctatcagtgcatcagg
ttcccagtggtggccatgggtgtattgaagtgggtggactggaccgtgtcagaaccacga
tacttccaactgcagactgatcacactccggttcatctggcattattggatgagatcagt
acatgccatcagctgcttcatccccaggttctacagcttctcatcaagctctttgaaaca
gaacattcacagcttgatgtaatggagcagctcgagttgaagaagactctcttggatcgg
atggtgcacttactcagtcgaggatacgtcctgcctgttgtcagctatatccgcaagtgc
ctggagaagctagataccgatatatctctcatcagatactttgttacagaggtgctggat
gtgattgctcctccatatacctcagactttgtacagctttttcttccaatcttggagaat
gaaagtattgcaggtactattaaaacagaaggcgaacatgatcctgtcactgagtttata
gctcattgcaaatctaactttattatgatgaactaa
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