Caloenas nicobarica (Nicobar pigeon): 135994757
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Entry
135994757 CDS
T11056
Symbol
RBL1
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04110
Cell cycle
cnic04218
Cellular senescence
cnic04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
135994757 (RBL1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
135994757 (RBL1)
04218 Cellular senescence
135994757 (RBL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135994757 (RBL1)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
135994757 (RBL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
Rb_C
TFIIB
eIF-3c_N
Endonuclease_5
Motif
Other DBs
NCBI-GeneID:
135994757
NCBI-ProteinID:
XP_065501655
LinkDB
All DBs
Position
15:complement(2228708..2254515)
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AA seq
1056 aa
AA seq
DB search
MSRPGPPPAEPGVAIERLCQELNLDAVSAAEALRDFTSLRGTYSLEGEALHWLACALYVA
CRKSRVPTVGSGLMEGNGVSLTRILRSARLSLIQFFSKMKKWMDMSNLPQEFRERVERLE
RNFEVSTVIFKKFEPIFLDIFQNPYEETSKPLRSRKQRRVPCGVKDLFNFCWTLFVYTKG
NFRMIGDDLVNSYHLLLCCLDLIFANALLCPNRRDLLNPSFKGLSVDFHTTDIKASEDAP
CIIAVLCELHDGLLVEAKGIKEHYFKPYISKLFDRKILKGECLLDLCNFTENNKALNKEY
EEYVLTVGDFDERVFLGADAEEEIGTPRKFPADVPVGKMAARAHVECHLQQHFEKKRSFA
PSTPLTGRRYLREKEAVITPVASATQSVSRLQNIVAGLKNAPSEQLITIFESCARSPVES
IMSRVKEIGETFCRSYTQSTAEQPGSHIDFAVNRFKLAEILYYKILETIMVQETRRLHGK
DLTALLEQDVFHRSLMACCLEIVLFAYSSPRTFPWIIEVLDLRPFHFYKVIEVLIRSEEG
LSRDMVKHLNSIEEQILESLAWTQDSALWSALQASENKVPTCEEVVFPSNFEASNGGVGL
GHLPMMPISPIIHPRVKEVRTDLSGSLRRDVQPLSPISVHERYSSPTAGSAKRRLFGDDS
PKEMQMEKILSEGTKLTIAPASSIAAENVSVSPGQTVLTMTTATVPGKMGQKVTIPLHGI
ASDMGGITLIPISMNFAQPCKVEAPAPSHPQVNQAPELHLSSASKPKRTGSLALFYRKVY
HLASVRLRDLCLKLDVSNDLRRKIWTCFEFTLVHCADLMKDRHLDQLLLCAFYIMAKVTK
EERTFQDIMKSYRNQPQANSHVYRSVLLRNVSADVQLDKNAKQDVDMREESSVKTGSSSG
RSAAESSSESETEERGDLIKFYNAVYVGRVKSFALKYDVTNHDHVVEAPPLSPFPHIKHQ
AGSPRRISQQHSVYVSPHKNGACLTPRSALMYKFSGSPSKSLKDINNMIKQGEHRSKKRA
ITIDSDTESPTKRLCQENDDVLLKRLQDVVSERANH
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcccggggccgccgcccgccgagcccggcgtcgccatcgagcggctctgccag
gagctcaacctggacgcggtcagcgccgccgaggcgctgcgggacttcacgtcgctgcgg
ggcacctacagcctggagggcgaggcgctgcactggctggcctgcgccctgtacgtcgcc
tgccgcaagagccgggtgcccacggtgggcagcgggctgatggaggggaacggtgtgtcc
ctcaccaggatcctgcgctctgccagactcagtttaattcagttttttagcaaaatgaag
aagtggatggacatgtcaaatctaccacaggaattccgagagcgagtggagaggctggag
agaaattttgaagtgtcaactgtgattttcaagaagtttgaaccaatatttttggatata
tttcaaaacccttacgaagaaacttctaaaccactgcgaagcaggaaacagagacgggtg
ccctgcggtgttaaagatctcttcaacttctgctggacgctctttgtgtacactaaaggt
aatttccgtatgatcggagatgatttagtaaattcctatcatttgcttctgtgctgcttg
gacctgatttttgcaaatgcccttttgtgtccaaatagaagagatttgctaaatccatca
tttaaaggattatcagtggatttccacacaacagatatcaaagcctctgaagacgctcct
tgcatcattgccgtgctgtgcgagctgcatgacgggcttttagtagaagcaaaaggaata
aaggagcactactttaaaccatacatttcaaaactatttgataggaagatcttaaaagga
gaatgtctgttggatctttgcaattttacagaaaataacaaagcactgaataaagagtat
gaagagtacgttctgacagtgggtgacttcgacgagcgagttttcctgggagctgatgct
gaagaagaaattggcactcctcggaaattccctgcagacgtgccagtagggaagatggca
gcgagggctcacgtggagtgtcatcttcagcagcactttgaaaagaaaaggtcgtttgca
ccttcaactccactgactggcaggagatacctacgagaaaaggaagccgtcatcactcct
gtcgcttcagcaacacaaagtgtgagccggttgcagaacattgtggctggattgaaaaat
gcaccgagtgaacaacttatcactatttttgagtcgtgtgcccgcagccctgtggaaagc
atcatgagcagagtgaaagaaataggcgagacgttctgtcgcagctacacccagtcaaca
gctgagcagccaggatctcacatagattttgctgtaaacagatttaagctggcagagatc
ttgtactataaaatcttggagactataatggtgcaagaaacacgaagactacacgggaag
gatctgactgctctcctggagcaggacgtctttcaccgctccctcatggcatgctgcctg
gagatcgtgctcttcgcatacagctccccacgtaccttcccctggatcattgaagttctt
gacctcaggccgttccatttctataaggtaattgaagtcctgattcggtctgaggaagga
ctttccagagacatggtgaagcacctcaacagcatcgaggaacaaattctcgagagtctt
gcctggactcaggactcggccctctggagtgccctccaggcctcggaaaacaaggtgcca
acctgcgaagaagtggtatttcccagtaattttgaagcaagcaatggaggagttgggctt
gggcatttgcctatgatgccaatatctcctataattcatcctcgagtaaaagaggttcgg
acagatctcagtgggagtttaaggcgggacgtgcagccattgtcaccaatctctgttcac
gagcgctacagttctcctacagctggaagtgcaaagagaaggctctttggggatgacagc
cccaaagaaatgcagatggaaaaaattttaagtgaaggaactaagttgacaattgctccg
gcatcaagcattgctgctgaaaatgtgtccgtttctcctggccagacagtactgaccatg
acaacagctacagtaccaggaaaaatgggacagaaggttactatcccactgcacggtatt
gccagtgacatgggggggatcacactgatccccatttccatgaacttcgctcagccctgt
aaggtggaggctccggctcccagccacccacaggtgaaccaggcaccagaactgcacctg
tcatcagcaagcaagccaaagagaacgggatccctggcactgttttacagaaaggtttat
catctggcaagtgtgcgcttgcgtgatctgtgcttgaaattggatgtttccaatgacttg
cgcaggaagatatggacgtgctttgaattcactctggttcactgtgctgatctaatgaag
gacaggcatttggaccagctcctcctctgcgccttctatatcatggcaaaggtaaccaaa
gaggaaagaacttttcaggacataatgaaaagttacagaaatcagccacaagcaaacagc
cacgtttacaggagtgtcttgttgagaaatgtttctgccgatgtccagttggacaaaaat
gcaaagcaagatgtggacatgagagaagagtcatctgtgaaaactggcagttcctcagga
cgatccgcagcagagagctcgagcgagtcggaaacagaggagagaggagatctgattaaa
ttttacaacgcggtctatgtaggaagagtaaaatcatttgcactgaagtatgatgtcaca
aaccacgatcacgtagtggaggccccccccttgtctccgttcccccacatcaagcaccag
gcggggtctcctcggcggatctcgcagcagcactcggtttacgtgtcgccccacaagaac
ggcgcctgcttgacacctcggtctgcgctcatgtataagttcagcgggagcccttccaag
agtttgaaggacatcaacaacatgataaaacaaggtgaacacaggagtaagaaacgagca
ataacaattgatagtgacactgaatcccctacaaagcgactctgccaggaaaatgatgat
gttctacttaaacgtctccaggatgttgtcagcgaaagagcaaatcattaa
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