Caloenas nicobarica (Nicobar pigeon): 135994832
Help
Entry
135994832 CDS
T11056
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator
KO
K15623
protein SSXT
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135994832 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cnic03036
]
135994832 (SS18L1)
Chromosome and associated proteins [BR:
cnic03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
135994832 (SS18L1)
GBAF(ncBAF) complex
135994832 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
135994832
NCBI-ProteinID:
XP_065501797
LinkDB
All DBs
Position
15:complement(11567084..11579791)
Genome browser
AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMNLGPGGMTQSTSNQSLHSQSNLSDAIGTGLPPSSLMQ
SQISNGPNHVSMQQSGQNTMPTTSLSMTVSSHGTGPGYSHTVPASQNVPMQGQGSIGNYV
SRTNINMQSNPVSMMHQQAATSHYNSAQGGSQHYQGQSSIAMMSQSNQGNSMMGQRPMGP
YRASQQGSSQQYMGQEEYYSEQYSHSQGSSEPMNQQYYPDGHGDYAYQQSSYTEQSYDRS
FDDSTQHYYEGGNSQYSQQQAGYQQGAAQQQTYSQQQYPNQQSYPGQQQGYGPAQGASSQ
YSSYQQGQGQQYGSYRASQSGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgcctttgcttctgctcgcccaagaggcaaaggggaggtcacccagcaaact
atccagaagatgctagatgaaaatcaccacctaatacaatgtattatggattatcagagc
aaggggaaaactgcagaatgtactcaataccaacaaatcttgcacagaaacctggtttat
ctggcaacaatagcagattctaaccagaatatgcagtccttgcttcctgctccaccgaca
caaaacatgaacttgggcccgggaggaatgactcagagcacgtccaaccagtctctccat
tcccagagcaatctcagcgatgccatcgggacgggccttcctccgtcctccctcatgcag
agccagatcagcaatggtcctaatcacgtgtctatgcagcagtcaggccagaacacgatg
cccacaacctctctgagcatgactgtgagcagccacgggactgggcctggttacagccac
acggtgcctgcgtctcagaacgtgccaatgcaaggccaggggtcaataggcaattacgtc
tctcgaacaaacatcaacatgcagtctaacccagtgtccatgatgcaccagcaagcagca
acgtcacattacaactctgcgcaggggggcagccagcactaccagggccagtcctccatc
gccatgatgagccagagcaaccagggcaacagcatgatgggccagcggcccatgggcccg
tacagagcttcacagcaaggttcctcgcagcagtacatggggcaggaggaatattacagt
gaacagtacagtcacagccagggctcgtcagagcccatgaatcagcaatattatcccgat
ggacatggtgattatgcctatcagcagtcatcctacactgaacagagctatgacaggtcg
tttgacgactctacacagcactattatgaaggaggaaattctcagtacagccagcagcag
gcgggataccaacagggagctgcacaacagcaaacatattcccagcagcaatacccaaat
caacaaagttacccgggacaacagcaaggatacggtcctgcacaaggagcctcctcacag
tattccagctaccaacagggacaggggcagcaatatggaagttacagagcttctcagtca
ggcccatccgctcagcaacagaggccttacggctatgagcagggacaatatggaaattac
cagcaataa
DBGET
integrated database retrieval system
