Caloenas nicobarica (Nicobar pigeon): 135994923
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Entry
135994923 CDS
T11056
Symbol
RPN2
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 isoform X1
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic00510
N-Glycan biosynthesis
cnic00513
Various types of N-glycan biosynthesis
cnic01100
Metabolic pathways
cnic04141
Protein processing in endoplasmic reticulum
Module
cnic_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
135994923 (RPN2)
00513 Various types of N-glycan biosynthesis
135994923 (RPN2)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135994923 (RPN2)
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Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
DUF6151
DUF5859
Motif
Other DBs
NCBI-GeneID:
135994923
NCBI-ProteinID:
XP_065501929
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Position
15:7356752..7375293
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AA seq
647 aa
AA seq
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MAAPGLRLRLAAALGLLLLLAGARALAPSHRLTARDLTRLRAALERPFTDLQAAFYSIVG
LSSLGVRVADEKAACSFIKSHVDSSSVDSLFYAAQSIRLLSGCEVTISNETRELLLAAVS
EDSSVTQIFHAVGALSGFGLPLASQEALSALTARLSKEESVLATIQALETASYLSQQADL
SGIVEEIEDLVARLDDLGGVYLQFEEGIETTALFVAAAYKLSDHVGMEPAMKEDQIIQLM
NAIFSKKNFETLSEAFSVACAAGSLSQNRYHLPVIIVPDGPAAVSHHQPILKLQVTDVMS
QPLTQAFVRLDYAKSASSKATVLQQTAFTLSGDVFELNFMNVKPASGYYDFSISVDGDKR
FIANKVELKVKVSTEVGITNVDLSTVDKDQSIAPKTTRVAYPAKAKGSFTADSHQNFALS
FQLIDVNSGAELIPHQTFVRLHNQKTGQEVVFVAEPDSKNVYKFELDTSERKTEFDSASG
TYTLYLIIGDATLENPILWNVADVVIKFPEEDAPSTVQSKNLFVPKPEIQHLFREPEKRP
STVVSNTFTALILSPLLLLLILWIKIGANISNFSFAPSTIVFHMGHAAMLGLMYVYWTQL
NMFQTLKYLAILGGITFLAGNRMLAQKAVKRIAAEQSSRLAKYRTLR
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgggcctgcggctgcgcctggcggcggccctcggcctcctgctcctcctc
gccggcgcccgggccctggcccccagccaccgcctcaccgcccgcgacctgacccggctg
agggcggcgctggagcggcccttcaccgacctgcaggccgccttctactccatcgtgggc
ctcagcagcctgggggtgcgggtggcggacgaaaaggctgcatgcagtttcatcaaatct
catgtggactccagcagcgtggattccctcttctatgcggcgcagtccatccggctcctg
tccggctgcgaggtcaccatttcaaatgagaccagggagctgctgcttgcggctgtcagt
gaggattcctctgtcacccagatcttccacgccgtcggggccctgagtggctttggcctc
cctttagcatctcaggaagcactgagtgctctcactgctcggcttagcaaagaagaaagt
gtgttggcaaccatccaggctttggagacggcatcttacttgtcccagcaggcagatcta
agtggcattgttgaggagatagaggatcttgttgctcgcctggatgatttgggtggagtt
tacctgcagtttgaagaaggaattgagactactgcactgtttgttgccgctgcctataag
ctgtcagaccatgtgggaatggaaccagcaatgaaggaggatcaaattatccagttgatg
aatgccatttttagcaagaaaaactttgagacgctctcggaggccttcagcgttgcttgt
gctgcaggttctttatcccagaaccgctaccacttgcctgtcattattgtccctgatggg
cctgcggctgtgtcccaccatcagcccatactcaagctacaagtgaccgatgttatgtcc
cagccactgactcaagcttttgtaaggctcgactacgccaagtctgcatctagcaaagcc
actgttctgcaacagacagcatttactctgtcaggagatgtctttgagctgaacttcatg
aacgtgaaacctgctagtggttattatgacttctctatcagtgtcgatggagataagcgc
tttattgctaacaaagttgagctgaaagtgaaagtttccacggaagttgggattactaat
gtagatctttctactgtggataaagatcagagcattgcgccaaaaacaaccagggtagct
tacccagccaaagccaagggctcgttcactgctgacagccatcagaattttgctttatcc
ttccagctgatagacgtgaacagtggagctgaactcatccctcaccagacttttgtccga
cttcacaaccagaagactggccaggaggtggtgtttgttgcagaaccagacagcaagaat
gtatacaagtttgaactggatacctctgaaaggaagactgaatttgactcggcctctggt
acctacactctttacttgataattggagacgccactctggaaaatccaatcctgtggaat
gtggctgatgttgtgatcaaattcccagaagaggatgcgccatccaccgtccagtccaag
aacctctttgttcccaaacctgaaatccagcacctcttcagggaacctgagaagaggcct
tccactgtggtgtcaaacactttcacagccttgattctctcccccctgcttttgctgctc
attctgtggatcaagataggtgccaacatctccaacttcagctttgctcccagcaccatt
gtttttcacatgggacatgctgcaatgttgggactcatgtatgtctactggactcagctc
aacatgttccagactctgaagtacttggccattttgggtggcatcacattcctggcaggc
aacaggatgctggctcagaaagcggtgaaacggatcgctgcagagcagagcagtaggttg
gcaaagtatagaacgctgcggtaa
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