Caloenas nicobarica (Nicobar pigeon): 135994978
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Entry
135994978 CDS
T11056
Symbol
SOX12
Name
(RefSeq) transcription factor SOX-12
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cnic03000
]
135994978 (SOX12)
Transcription factors [BR:
cnic03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
135994978 (SOX12)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
135994978
NCBI-ProteinID:
XP_065502005
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All DBs
Position
15:9032880..9033779
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AA seq
299 aa
AA seq
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MVQRGTRGRGAEARREPCAPLPTRDTEPAWCKTPSGHIKRPMNAFMVWSQHERRKIMDQW
PDMHNAEISKRLGRRWQLLHDSEKIPFVKEAERLRLKHMADYPDYKYRPRKKGKVGTGAA
RPRLPVKIKPSVLGRVSAGRKQPAKPPASPDTPQEPALEVPAEDSLAAPSTAAWHVAPTE
ERGAKEPPVPPIPAAACPEPGSSPESGSPSPMSARSPPSSFSSSDEELEEELLGVLPARA
PAGAACTALDWSVFDKDHDLFPRGGSSHFEFPDYCTPEVTEMIAGDWLMSSISDLVFTY
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcgcggcacacggggccggggcgcggaggctcggcgggagccctgtgccccg
ctgcccacccgtgacaccgagcccgcctggtgcaagacaccgagcgggcacatcaagcgg
cccatgaatgccttcatggtgtggtcacagcacgagcggcgcaagatcatggaccagtgg
cccgacatgcacaacgccgagatctccaagcgcctgggccggcgctggcagctcctccac
gactctgagaagatcccctttgtcaaggaggccgagcgcctgcgcctcaagcacatggcc
gactaccccgactacaagtaccggccccggaaaaagggcaaggtgggcactggcgcggcc
cgcccgcggctcccagtgaagatcaaaccctcagtgctgggccgcgtctccgccggccgc
aagcaacccgccaagccgcctgccagccctgacaccccacaggagcccgcgctggaggtg
ccggctgaggacagcctcgcggcacccagcactgctgcctggcacgtggcacccaccgag
gagcgtggcgccaaggagcctcccgtgccccccatccctgccgccgcctgccccgagccg
gggagctccccagagagcgggtctccctctcccatgtcggccaggtcccctccctcctct
ttcagctcctccgatgaggagctggaggaagagctgctgggggttctgcccgcgcgggcc
cctgccggtgccgcctgcactgccctggactggtccgtcttcgacaaggaccacgacctg
ttcccgcggggaggctcctcgcacttcgagttcccggactattgcacgcccgaggtgaca
gagatgatagcgggggactggctcatgtccagcatctcagacttggtctttacctactga
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