KEGG   Caloenas nicobarica (Nicobar pigeon): 135995086
Entry
135995086         CDS       T11056                                 
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
  KO
K23625  ataxin 2/2L
Organism
cnic  Caloenas nicobarica (Nicobar pigeon)
Brite
KEGG Orthology (KO) [BR:cnic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cnic03019]
    135995086 (ATXN2)
Messenger RNA biogenesis [BR:cnic03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     135995086 (ATXN2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 135995086
NCBI-ProteinID: XP_065502169
LinkDB
Position
16:complement(5317600..5369219)
AA seq 1099 aa
MSLKQAAAAAQAAGNNRKPPGGGGGPGLPSAAGGGRQNMGRGRSSGKGPPQPTISFDGIY
ANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTYSPKCDLVLDAAHRKTAESSLGPKRED
ILESILFKSSDFVMVHFKDMDTNYARRVPSETDAFTDSAISAKVNGEHKEKDLEPWDGGE
TTAAEELEALETDVSNGWDPNDMFRYNEENYGVVSTYDSSLSSYTVPLERDNSEEFLKRE
ARATQLAEEIESSAQYKARVALENDERTEEEKYTAVQRNANEREGHGVNTRENKYIPPGQ
RNRDVLSWGTGRPNSTRMGQSGSGPPISRSGSHTSEFSSNSGADQRVVNGGVPWPSPCPS
PSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSSE
GPPRMSPKAQRHPRGHRVSTGRGTISSGLEFVSHNAPGEASTAAVARGSSSGGTWSSVVS
GVPRLSPKTHRPRSPRQSSAPAGPALPSPQPGAIPTESVAMPVPAASPTPASPASNRAVT
PSSEAKDTRLQDQRQNSATGNKENIKPSETSPSFPKPENKGVSPIVSEHRKQIDDLKKFK
NDFRLQSSSSSDAVDQLLNKTREGEKSRDVVKEKTESTPKESIIETGSNTNSNGGSSKPN
SPSISPSISNSSEQKRGPEVTSQGVQTSGPGSKQDKEDKEEKKDTSEQVRKSTLNPNAKE
FNPRSFAQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQP
LYPIPMTPMPVNQAKTYRAGKVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQY
VAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNARMMAPPTHAQPGLVSSSATQYGAH
EQTHAMYVSTGSLAQQYAHPNATLHPHPPHPQPSATPTGQQQSQHAGSHPAPSPVQHHQH
QAAQALHLANPQQQSAIYHAGLAPTPPSMTPGSNTQSPQNSFPTAQQTVFTIHPSHVQPA
YTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAAIAQSALQPIPVSTTTH
FPYMTHPSGEECVPARPAP
NT seq 3300 nt   +upstreamnt  +downstreamnt
atgtccctcaagcaagcggcggcggcggcgcaggccgccggcaacaaccgcaagcccccc
ggcggcggcggcggccccggcctcccgtcagccgcgggcggcgggaggcagaacatgggc
agaggtcgcagcagtggcaaaggaccacctcagcctacaatttctttcgatggcatctat
gcaaacatgagaatggttcacatacttacgtcagttgttggatccaaatgtgaagtacag
gtgaaaaatggtggtatatatgaaggagtttttaaaacctacagtcctaagtgtgattta
gtgcttgatgctgctcatcggaaaaccgcagaatccagtttggggccaaaacgtgaagac
atactagagagtatcttgttcaagtcttcagattttgttatggtgcattttaaggatatg
gataccaattacgcgagaagagttccttcagaaacagatgcttttactgattcagccatc
agtgctaaagtaaatggtgaacacaaggaaaaggatcttgaaccgtgggatggaggagag
accaccgctgctgaggagctggaggcgttagagacagatgtttctaatggatgggatccc
aatgacatgtttcgttacaatgaagaaaattatggtgtagtatcaacttatgacagcagt
ttatcttcttatacggtgccattagaaagagataattcagaagagtttttaaaacgggaa
gccagagcaactcaattagcagaggaaattgaatcaagtgcccaatacaaagctcgagtt
gccttggaaaatgatgaaagaacagaagaagaaaaatatactgctgttcagagaaatgct
aatgaacgagaaggacatggtgtgaacactagagaaaataaatacattccacctggacag
aggaatagagatgtcctgtcctggggaactggaagaccaaactcaacaaggatgggccag
tctgggtcaggcccaccgatttcaaggtctggatcccatacttcagaattcagttctaac
tctggagcagatcaaagagtagttaacggaggtgttccctggccatcgccttgcccatct
ccttcctctcgcccaccttctcgctaccagtcaggtcccaactctcttccacctcgggca
gccacccctacgcggccgccctccaggcccccctcgcggccctccaggcccccgtctcac
ccctctgctcatggttctccagctcctgtctctactatgcctaaacgcatgtcttcagaa
gggcctccacggatgtctcctaaggcacaacggcaccctcgaggtcacagagtctctact
ggtaggggtacaatttcaagtggcttagaatttgtatctcataatgcaccaggggaagca
tctactgctgcagtggcacgaggcagctcttcaggtgggacgtggtcatcagttgtcagt
ggggttccgagattgtcccccaagacccaccggccgaggtccccgaggcagagcagcgct
cccgcgggcccggcgctgccctctcctcagccgggtgccatccccacggaatccgtggcc
atgcctgttccagctgcctctcccacccccgccagccctgcgtccaacagagccgtcacc
ccttccagtgaagctaaagatactaggcttcaggaccagaggcaaaactctgcaactgga
aacaaggagaatataaagccaagtgagacttctcctagttttcctaaacctgaaaacaaa
ggtgtatctccaattgtttcagagcatagaaaacagattgatgatttaaagaaatttaag
aatgactttaggttacagtcgagttcttcttcagatgcagtggatcagctgctaaacaaa
acccgagaaggtgaaaaatcaagagatgtagttaaagaaaagacagaatcaacccctaaa
gaatctatcatagaaactggcagtaatactaactctaacggtggcagtagcaaacctaat
agtccaagtatttctccttcgataagtaatagttctgagcaaaaacgagggcctgaggta
acttcacaaggtgtacagacatctgggcctggaagtaaacaagataaagaggataaagag
gagaagaaggatacttctgagcaagttagaaaatcaacacttaatcctaatgcaaaagag
ttcaaccctcgatcttttgctcaaccaaaaccttctactacaccaacctcccctcgtccg
caagctcagcccagcccctccatggtgggtcatcagcagccaacccccgtgtacactcag
cctgtttgttttgcaccaaatatgatgtacccggttccagtgagtccaggcgtgcagcct
ctgtatcctattcccatgacgcccatgccagtgaaccaagccaagacatatagagcaggt
aaagtaccaaatatgccacagcaacggcaagaccaacatcaccagagcaccatgatgcac
cctgcctcggcagcaggccctccgattgtagctacgccacctgcttattcaacacaatat
gttgcatatagtccccaacagtttcctaatcagcctcttgtgcagcatgtgccacactac
caatctcagcatcctcatgtttatagccctgtaatacagggcaacgctagaatgatggca
ccaccaacacacgcacagcctggtttagtatcttcttctgcaacacagtatggtgcgcat
gaacagacgcatgctatgtatgtttccaccggctcacttgctcagcagtatgcccaccct
aatgctaccctgcatccgcatcctccgcatcctcagccttctgccaccccgactggccag
cagcaaagccaacatgctggaagccaccctgctcccagccccgtgcagcatcatcagcac
caggctgcccaggcactccacctggcaaacccacagcagcagtcggcgatttaccacgca
ggtctagctccaaccccaccttccatgacgccaggctccaatacgcagtctccacaaaat
agttttcctacagcacaacaaacagtcttcaccattcatccctcccatgttcaacctgca
tataccaatccgccacacatggcccatgtcccccaggctcatgtacagtcaggaatggtt
ccttctcacccaactgcccatgctccaatgatgctaatgacgacacaaccacctggtggt
ccccaagccgccatcgctcaaagtgcactacagcccattcccgtctcgacaacaacacat
ttcccctatatgacgcacccttcaggtgaggagtgtgtgcccgcgagacctgcaccgtaa

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