Caloenas nicobarica (Nicobar pigeon): 135995140
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Entry
135995140 CDS
T11056
Symbol
VPS33A
Name
(RefSeq) vacuolar protein sorting-associated protein 33A
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04140
Autophagy - animal
cnic04142
Lysosome biogenesis
cnic04145
Phagocytosis
cnic04148
Efferocytosis
cnic05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
135995140 (VPS33A)
04142 Lysosome biogenesis
135995140 (VPS33A)
04140 Autophagy - animal
135995140 (VPS33A)
04148 Efferocytosis
135995140 (VPS33A)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135995140 (VPS33A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135995140 (VPS33A)
Membrane trafficking [BR:
cnic04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
135995140 (VPS33A)
Hops complex
135995140 (VPS33A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
RMD9_mid
Motif
Other DBs
NCBI-GeneID:
135995140
NCBI-ProteinID:
XP_065502294
UniProt:
A0A7K6SS48
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Position
16:complement(4953719..4962801)
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AA seq
601 aa
AA seq
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MAAHLSSGRVNLTLLREAGRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKPGRLPQADVKNVIFFVRPKLELMDIITDNVLREDRGRSPQRDFHILFVPRRSL
LCEQWLKEQGVLGSFIHREQYSLDLIPFDGDLLSMESESAFKECYLESDQTSLYHAAKGL
MTLQALYGTIPQIFGKGECARHVANMMIRMKREFPGSQNSIFPVFDTLLLLDRNVDLLTP
LATQLTYEGLIDEIYGIQNTYVKLPPEKFAPKKQGEGGKDLPTEPKKLQLNSAEELYAEI
RDKNFNAVGSVLSKKAKIISAAFEERHHAKTVGEIKQFVSQLPHMQAARSSLANHTSIAE
LIKDITTSEDFFDNLTVEQEFMSGIDTDKVNNYIEDCIAQKHPLIKILRLVCLQSVCNSG
LKQKVLDHYKREILQTYGYEHILTLNNLEKAGLLKPQISGRNNYPTIRKTLRLWMDDVNE
QNPNDISYVYSGYAPLSVRLAQLLARPGWRSIEEVLKMLPGPHFEERQQLPTGLQKKRQH
GENRVTLVFFLGGVTYAEIAALRFLSQMEDGGTEYVIATTKLINGTSWIKSLMEKLEPAP
F
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcacctgagctcggggcgggtgaacctgacgctgctgcgggaggccgggcgg
cgcgagctgcgcgagttcctggacaagtgcgcgggctccaaggccatcgtgtgggacgag
tacctgaccgggcccttcgggctgatcgcgcagtattcgctcctgaaggaacatgaggtg
gaaaagatgttcacgctcaagcctggccgcctgccccaggcggacgtcaagaacgtcatc
ttcttcgtgaggcccaagctggagctgatggacatcatcaccgacaacgtgctcagggaa
gacagaggccgctctccccagagggatttccacatcctcttcgtgccacgccgcagcctg
ctgtgcgagcagtggctgaaggagcagggtgtgctgggctccttcatccaccgggagcag
tacagcctggacctgatacccttcgatggagacctgctctccatggagtctgagagcgcg
ttcaaggaatgttacctggagagcgaccagacaagtctgtaccacgcagcaaaggggctg
atgacgcttcaggctctctacggaaccatcccacagatttttgggaagggcgagtgtgcc
cggcacgtggctaatatgatgatcaggatgaagcgtgagttccctggaagccagaactcg
atatttcccgtctttgataccctgttgttgctggaccgcaacgtcgatctgctgacgccg
ttagctacacagctgacgtacgaagggctgatagatgaaatctacggaattcagaacact
tatgtgaaactccctcctgagaagtttgccccgaagaagcagggtgagggtgggaaagat
ctccccacggaacccaagaagctccagctgaactctgctgaagagctgtacgcagaaatt
cgagacaagaacttcaatgctgtggggtctgtgctgagcaagaaagccaagatcatctca
gcagcctttgaggaaagacatcacgcaaaaaccgtcggagagattaagcagtttgtgtcg
cagctgccacacatgcaggcggcaagaagttctctagcgaaccacacctccattgcagaa
ctcatcaaagacatcaccacatctgaagatttctttgataatttaacagtggaacaagag
ttcatgtctggaatagacacagacaaggttaataattatattgaagactgcatagctcaa
aaacatccattaatcaagatcttacgccttgtttgcttgcaatctgtatgcaatagtgga
ctgaaacagaaggttctggaccattacaaaagagagattctccagacttacggctatgaa
catatattgaccttaaacaacttagaaaaggctggactcctgaaacctcagataagtggt
aggaataactacccaacgatcaggaaaaccctgcgcttgtggatggatgatgttaatgaa
cagaaccccaacgacatctcctacgtgtacagtggctatgctccgctgagcgtacgcctg
gcgcagctgctggctcggccaggctggcggagcatagaggaggtgttaaagatgctgccg
ggtccccattttgaggagaggcagcagttacctactggccttcagaaaaagcgtcaacat
ggtgagaaccgagtcactctggtgttcttcctgggaggggtgacttatgcagaaatagct
gcactgaggtttctgtcccaaatggaagatggaggcaccgagtacgtcattgccacgaca
aaactgatcaatggaacaagttggatcaaatccttgatggaaaaactggagcctgcccct
ttctag
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