Caloenas nicobarica (Nicobar pigeon): 135995157
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Entry
135995157 CDS
T11056
Symbol
ABCB9
Name
(RefSeq) ABC-type oligopeptide transporter ABCB9
KO
K05656
ATP-binding cassette, subfamily B (MDR/TAP), member 9
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic02010
ABC transporters
cnic04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135995157 (ABCB9)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
135995157 (ABCB9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135995157 (ABCB9)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnic02000
]
135995157 (ABCB9)
Membrane trafficking [BR:
cnic04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
135995157 (ABCB9)
Transporters [BR:
cnic02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
135995157 (ABCB9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
RsgA_GTPase
AAA_16
nSTAND1
AAA_29
DUF4191
DUF2448
ABC_ATPase
XRI1_C
Motif
Other DBs
NCBI-GeneID:
135995157
NCBI-ProteinID:
XP_065502336
LinkDB
All DBs
Position
16
Genome browser
AA seq
794 aa
AA seq
DB search
MRAWKAVASTLALSGTDVVVTTLLYTHGRGGRDILQDLRHFNIFNSMLDIWGGCLYRSCV
LLGAAIGVATNTAYGPRRLRASRTFIAIVCLLMGIYMMVKLLLYSEVRRTIRDPWFWGLF
AWTYVALAATLGLWQLLACVTSSREALGPGSESRTEAEESCDGSARRDKREEAASPTIHK
LLSYTKPDAFLLGIASFFLLVAALGETFLPYYTGLAIDGIVVQKSMDRFSAAVLVMSLLA
IGSSFAAGIRGGVFTLIFARLNIRLRNCLFRSLVAQEMSFFDENRTGDIISRLTSDTTIV
SDLVSQNINIFLRNVVKATGVIFFMFSLSWKLSLVTFMGFPIIMLVSDVYGKYYQKLSKE
VQNALAKANNTAEETISAMKTVRSFANEETEANVYWQKLQQVYKLNKRESMAYTYYVWSS
GLTLLVVQVSILYYGGHLVISEQMTSGNLISFIIYEFVLGDCMESVGSVYSGLMQGVGAA
EKVFEFIDRKPTMVNDGSLAPDHVDGRVEFRNVTFSYRTRSSTQVLENVSFILHPGKVTA
LVGPSGSGKSSCVNILENFYPLQEGQVLLDGRPINMYDHKYLHSVISLVSQEPVLFARSI
ADNISYGLTSASFESVVQAAQKANAHGFITELQDGYHTEAGEKGAQLSGGQKQRVAIARA
LIRTPPILILDEATSALDAESEHAIQQAIYGDLQNHTVLVIAHRLSTVEKAHNIVVLDKG
RVVQQGSHKELMKEEGGLYSKLVQRQILGLEEAGADGHQPAARGDSAKAPGGLEEEFRID
HPVAQDDYNNVIHK
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcatggaaggcggtggccagcacactggcactcagcgggaccgatgtggtggtc
accacgctgctctacacccacggccggggtggccgggacatcctgcaggacctgcggcac
ttcaacatcttcaactcgatgctggacatctgggggggctgcctgtaccgcagctgtgtg
ctgctgggggctgccatcggggtggccaccaacacggcctatggcccccggcgcctcagg
gcatcgcggaccttcatcgccatcgtctgcctcctcatgggcatctacatgatggtgaag
ctgctgctctactcggaggtgcggaggaccatcagggacccctggttctgggggctcttt
gcatggacctacgtggcgctggcggccaccttagggctgtggcagctgctggcctgtgtc
acctcctcccgcgaggcgctggggcccggctccgagtcccgcaccgaggcggaggagagc
tgcgatggcagcgcccggagggacaagcgggaggaggcggcgagtcccaccatccataaa
ctgctgtcctacaccaagccagacgccttcctcctgggcattgcctccttcttcctcctc
gtggccgctctgggagagaccttcctgccctactacacagggctggccatcgatggcatc
gtggtgcagaagagcatggaccgcttctctgcagccgtgctggtcatgtcgctgcttgcc
ataggaagctcatttgccgcaggtatccggggcggcgtttttacgctcatatttgcaaga
ctgaacattcgccttcgcaactgcctcttcaggtcgctagtggctcaggagatgagtttc
tttgatgagaaccgcacaggggacatcatctcacgcctgacatcagacacgaccatcgtg
agtgacttggtctcccagaacatcaacatcttcctgcgcaatgtggtgaaggccacgggg
gtgatcttcttcatgttcagcctctcctggaagctctcgctcgtcaccttcatgggcttc
cccatcatcatgctggtgtctgatgtttatgggaaatactaccagaagctctccaaggag
gtgcagaacgcgctggccaaggccaacaacaccgctgaggagaccatctcggccatgaag
actgtccgcagctttgccaacgaggagacggaggccaacgtgtactggcagaagttgcag
caggtgtacaagctcaacaagcgggagtccatggcttacacctactatgtctggtccagc
gggctgactctcctggtggtccaggtcagcattctgtactacggtgggcacctggtgatc
tcggagcaaatgacaagcgggaacctgatatcgttcatcatttacgagttcgttttagga
gactgcatggagtccgtcggctccgtctacagtggcctgatgcagggagtgggagctgcc
gagaaggtgtttgagttcattgaccgcaagccaacaatggtgaatgacgggtccctggcc
ccagatcacgtggatggaagagtggagttcagaaacgtgacattttcctatcgcactcgc
tcctcaacgcaggtcctcgagaatgtgtccttcatcctgcaccccggcaaagtgacggcg
ctggtgggtccttcgggaagcgggaaaagctcctgtgtcaacatcttggagaacttctac
cctctgcaagaggggcaggtgctgctggacgggcgtcccattaacatgtacgatcacaag
tacctgcactccgtgatctccctggtgagccaagagccggtgctgttcgcccgctcgatt
gcggataatatttcttatggcttaacctcagcctcctttgagtcggttgttcaggctgcc
cagaaggccaacgcgcatggcttcatcaccgagttacaagacggctaccacacagaggca
ggtgaaaaaggagcccagctgtcaggtggccagaagcagagagtggcaattgccagggcc
ttgatccgaaccccccccatcctcatcctggacgaagccacgagcgcgctggatgcggag
agcgaacacgcgattcaacaggcgatttacggcgatttgcagaaccacacggtgcttgtc
atcgctcacaggctgagcactgtggagaaggcacacaacatcgttgtgctggacaagggc
cgcgtggtgcagcagggctcacacaaggagctgatgaaagaagaaggcggcctttattcc
aaactggtgcagagacagatcctggggctggaagaggccggcgcggacggtcaccaaccc
gcagcccggggggattcggcgaaggcgcccggcgggctggaggaagagttcaggatagac
catcccgtggcacaggacgattacaacaacgtgattcacaagtga
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integrated database retrieval system
