Caloenas nicobarica (Nicobar pigeon): 135995165
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Entry
135995165 CDS
T11056
Symbol
USP30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
cnic Caloenas nicobarica (Nicobar pigeon)
Pathway
cnic04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cnic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
135995165 (USP30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cnic01002
]
135995165 (USP30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cnic04131
]
135995165 (USP30)
04121 Ubiquitin system [BR:
cnic04121
]
135995165 (USP30)
Enzymes [BR:
cnic01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
135995165 (USP30)
Peptidases and inhibitors [BR:
cnic01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
135995165 (USP30)
Membrane trafficking [BR:
cnic04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
135995165 (USP30)
Ubiquitin system [BR:
cnic04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
135995165 (USP30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
135995165
NCBI-ProteinID:
XP_065502352
LinkDB
All DBs
Position
16:5904614..5915959
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AA seq
509 aa
AA seq
DB search
MVLPGGAAEADGPVRRLLRAGAAARYKVMKNWGVIGGVAAAVAAGMYVLWGPITERKRRR
KGLVPGLLNLGNTCFMNSLLQGLSSCPSFVKWLEEFTAQYKTDQNPSTKHRYLSVTLLHL
LKALSCQEVTEDDVLDASCLLEVLRMYRWQISSFEEQDAHELFHVLTSSLEDERDRQPRV
THLFDVHSLEQPDITQKQISCRTRGSLPPVSNHWRSQHPFHGRLTSNMVCKHCEHQSPVR
YDTFDSLSLSIPATVWGRPMTLDHCLHHFISSESVKDVVCDNCTKIQAEGTLNGQSIENQ
RTTFVKQLKLGKLPQCLCIHLQRLSWSNQGTPLKRHEHVQFNEFLIMDIYKYHIPVHKSS
QNELNQKNSEEAMPGTKDGMAVKPSDAEQPSGPKPLFMNGACSSSFLTSSGTFPLAAFPE
CSSPVYLYRLMAVVVHHGDMHSGHFVTYRRSPPSAKHPLAVSSQWLWISDDTVRKASLQE
VLSSSAYLLFYERVHSRAQHQSLELRAEE
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgcccggcggcgccgcggaggcggacgggccggtgcggcggttgctgcgggcc
ggggcggcggccaggtacaaggtgatgaagaactggggcgttatcgggggggtggcggcg
gccgtggccgcggggatgtacgtgctgtggggacccatcaccgagaggaagcggcgcagg
aaagggcttgtacctggccttctgaacttgggaaacacctgtttcatgaactccctgctg
caaggtttatcctcctgcccgtccttcgtcaagtggctggaggaatttacagcccaatac
aagacagaccagaacccgtccactaagcaccgctacttgtcagtcactttgctgcatctc
ctgaaagctctatcctgtcaggaggtgacagaagatgacgtcctggacgccagctgcctg
ctggaagtgttacggatgtaccggtggcagatctcttcattcgaagagcaggatgctcat
gaactctttcatgtcctcacatcttcattagaagacgaacgagatcgtcagccacgtgtg
acacatctgttcgatgtgcattcgctggagcagccagacataacccaaaagcaaataagc
tgcagaacaagagggtctcttccccctgtgtcaaatcactggagatctcagcatcctttt
catgggcggctgaccagcaacatggtttgcaaacactgtgaacaccagagtcctgtgagg
tacgacaccttcgacagtctctcgctgagtattccagccactgtctggggtcgtcctatg
acgctggaccactgtctccatcatttcatctcctctgaatctgtaaaggatgttgtgtgt
gacaactgcactaaaattcaggcagaagggactctgaatggacagagcatagaaaaccag
agaacaacatttgttaagcaattaaagttaggaaagctccctcagtgtttgtgcatccac
ctgcaaaggctgagctggtcaaaccaaggcactcctctgaaacggcacgaacatgtccag
ttcaacgagttcctcatcatggacatatacaaatatcacattcctgtgcataaatcaagc
cagaatgagctgaaccagaaaaactctgaagaggcaatgcctggaacaaaggatgggatg
gcagtaaaaccttcagatgcagaacagccatctggtcctaagccgctcttcatgaatggt
gcctgctcctcttcatttttaacgtcctcaggaacttttccacttgctgcattccctgag
tgcagttcccccgtgtacctttaccgtctgatggcagtcgtggttcaccacggagacatg
cactcgggacactttgtgacgtaccgccgctcgccgccttctgcgaagcacccgctggcc
gtcagcagccagtggctgtggatttcggatgacaccgttcgcaaagccagcttgcaggag
gtcctttcttctagcgcttacttgcttttctatgagcgtgttcactcgagggcgcagcac
caaagcttggagctgagggctgaagagtga
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